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16 protocols using oxacillin

1

Methicillin and Oxacillin Susceptibility Testing of S. aureus

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All colonies confirmed to be S. aureus were tested for methicillin (5 μg) and oxacillin (1 μg) susceptibility by the modified Kirby–Bauer disc diffusion method. Using a sterile loop, colonies from nutrient agar which were confirmed to be S. aureus were picked up, suspended in sterile saline, and mixed to even turbidity. The turbidity intensity of bacterial suspension was adjusted in comparison with the 0.5 McFarland turbidity standard by adding saline or more bacteria. A sterile cotton swab was dipped into the bacterial suspension. Then, the Mueller-Hinton agar plate (HiMedia, India) was inoculated by swabbing in three directions to evenly distribute the inoculum and make sure there were no gaps between streaks. 5 μg methicillin disc and 1 μg oxacillin (HiMedia, India) were applied using a sterile needle to come in contact with the agar surface. Inoculated Muller-Hinton plates were incubated at 35–37°C for 24 h [24 ]. Resulted inhibition zones were measured using a ruler. Inhibition zone less than or equal to 9 mm indicated S. aureus to be MRSA, while inhibition zones less than or equal to 17 mm indicated oxacillin-resistant S. aureus (Zone Size Interpretative Chart, HiMedia).
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2

Hemolytic Activity and Antibiotic Susceptibility of LAB

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We assessed the hemolytic activities of LAB strains showing antagonistic activity during initial screening by the presence of α/α (a small zone of greenish-brownish discoloration of the medium, indicating reduction of hemoglobin to methemoglobin), β/β (clear, colorless or light yellow zone surrounding the colonies depicting total lysis of red blood cells), and γ/γ (with no change observed in the medium) hemolysis following the protocol of Maragkoudakis et al. (2006) (link). In the antibiotic susceptibility test, we examined promising screened and characterized LAB isolates using the agar disc diffusion method (Bauer et al., 1966) (link). Twelve antibiotics were tested (Hi-Media): penicillin G (2 units), ceftriaxone (30 µg), ampicillin (25 µg), vancomycin (30 µg), oxacillin (1 µg), streptomycin (10 µg), chloramphenicol (30 µg), gentamicin (10 µg), erythromycin (10 µg), tetracycline (10 µg), novobiocin (30 µg), and ciprofloxacin (10 µg). Isolates were categorized as sensitive (≥21 mm), intermediate (16-20 mm), or resistant (≤15 mm) (Liasi et al., 2009) . The multiple antibiotics resistance (MAR) index was determined for each probiotic strain as previously described by Ngwai et al. (2011) .
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3

Identification of S. aureus and MRSA

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Colonies that showed β-hemolysis on blood agar plates were verified as S. aureus by Gram stain and with the Staphaurex test as previously described (Thermo Fisher Scientific Remel Products, Lenexa, KS, United States; Roberts et al., 2011b (link)). MRSA isolates were initially identified by their ability to grow on Mueller-Hinton agar (HiMedia Laboratories, India) supplemented with 4 mg/L of oxacillin (HiMedia Laboratories, India). Identification as MRSA was confirmed using the Thermo Scientific PBP2’ latex agglutination test kit according to the manufacturer’s instructions (Thermo Fisher Scientific Remel Products, Lenexa, KS, United States; Roberts et al., 2011b (link)).
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4

Antimicrobial Susceptibility of S. aureus

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All the identified S. aureus isolates were subjected to an in vitro antimicrobial susceptibility test by employing the modified Kirby–Bauer disc diffusion method as recommended by Clinical and Laboratory Standard Institute (CLSI) guidelines [19 ]. The antimicrobial disks used were ampicillin (30 μg), cefoxitin (30 μg), chloramphenicol (30 μg), ciprofloxacin (25 μg), clindamycin (31 μg), cotrimoxazole (25 μg), erythromycin (26 μg), gentamycin (28 μg), linezolid (30 μg), oxacillin (10 μg), tetracycline (20 μg), and penicillin (10 μg) from HiMedia, India.
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5

Enzymatic Assay for Cysteine Sulfoxide Synthesis

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Reduced
form of nicotinamide adenine dinucleotide
(NADH), lactate dehydrogenase (LDH) from rabbit muscle, and (±)-L-alliin
were purchased from Sigma-Aldrich; pyridoxal 5′-phosphate (PLP)
and d,l-dithiothreitol (DTT) were from Serva; kanamycin
is a domestic product (OAO Biokhimik); DEAE-sepharose was from Amersham.
2-Nitro-5-thiobenzoate (NTB) was prepared according to ref (31 (link)). S-Methyl-l-cysteine sulfoxide (methiin) was synthesized according to
Morozova et al.22 (link) PEG–poly(α,β-aspartic
acid)70 (PEG–P(Asp)70) and poly-(l-lysine)70 (PLL70) were synthesized according
to Koide et al.32 (link) Luria–Bertani
broth (LB), Mueller–Hinton broth, Mueller–Hinton agar,
and antibiotic-impregnated discs: amikacin, amoxycillin/clavulanic
acid, ampicillin, azithromycin, aztreonam, cefepime, ceftazidime,
ceftriaxone, cephotaxime, cephoxitin, chloramphenicol, ciprofloxacin,
colistin, doxycycline, erythromycin, gentamicin, imipenem, levofloxacin,
lincomycin, norfloxacin, ofloxacin, oxacillin, rifampicin, spiramycin,
tobramycin, and vancomycin were from HiMedia Laboratories Pvt. Limited
(India).
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6

Antimicrobial Susceptibility of MRSA Isolates

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The in vitro antimicrobial susceptibility test for all the MRSA isolates were performed using ampicillin (A), ampicillin/sulfbactam (A/S), chloramphenicol (CL), ciprofloxacin (CP), clindamycin (CD), co-trimoxazole (COT), levofloxacin (LE), linezolid (LZ), fusidic acid (FC), minocycline (MIN), mupirocin (MU), ofloxacin (OF), oxacillin (OX), gentamicin (G), tetracycline (TET), rifampicin (RIF), teicoplanin (TEI), and vancomycin (V) (HiMedia Laboratories, India). Minimal inhibitory concentration (MIC) of daptomycin and vancomycin were determined by E-test method (Biomerieux, New Delhi; Ezy MIC strips, HiMedia Laboratories, India). The MRSA isolate that exhibited a vancomycin MIC of 4-8 mg/L was considered a VISA isolate. All assays were performed in accordance with Clinical and Laboratory Standards Institute guidelines.[18 ]
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7

Antibiotic Disk and E-strip Evaluation

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Raw materials of antibiotics of doripenem, tigecycline, and tetracycline were provided by Cayman Chemical Company (Michigan, USA) and cefepime was provided by Demo S.A. Pharmaceutical (Votanikos, Greece). doripenem and cefepime were suspended in saline while tigecycline and tetracycline were suspended in distilled water. The antibiotic disks of tigecycline (15 µg), doripenem (10 µg), oxacillin (1 µg), and cefoxitin (30 µg) were provided by Oxoid (Hampshire, UK), while cefepime (30 µg) and tetracycline (30 µg) were provided by Bioanalyse (Ankara, Turkey). The antibiotic E-strips of tigecycline (0.016-256 µg/ml), tetracycline (0.016-256 µg/ml), cefepime (0.016-256 µg/ml), oxacillin (0.016-256 µg/ml), cefoxitin (0.016-256 µg/ml), and doripenem (0.002-32 µg/ml) were provided by HiMedia (Mumbai, India).
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8

Antibiotic Susceptibility Testing Protocol

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The antibiotic susceptibility test was conducted using the Kirby–Bauer disk diffusion method [37 (link)]. The standard antibiotic discs were procured from ‘HiMedia, Mumbai, India, which include polymyxin-B (300 µg), amoxiclav (30 µg), rifampicin (5 µg), tetracycline (30 µg), oxacillin (5 µg), amikacin (30 µg), cefoxitin (30 µg), cefepime (30 µg), ceftazidime (30 µg), cefotaxime (30 µg), chloramphenicol (30 µg), cefdinir (5 µg), penicillin g (10 µg), moxifloxacin (5 µg), ampicillin (10 µg), vancomycin (30 µg), ceftriaxone (30 µg), neomycin (10 µg), ofloxacin (5 µg), norfloxacin (10 µg), kanamycin (30 µg), bacitracin (10 µg), co-trimoxazole (25 µg), methicillin (10 µg), streptomycin (10 µg), levofloxacin (5 µg), erythromycin (15 µg), clindamycin (2 µg), gentamycin (120 µg), and sterile disc (control). The antibiotic discs were placed onto the freshly prepared lawns of each isolate on Mueller–Hinton agar (MHA) plates. The plates were incubated at 40 °C for 24–48 h, and the diameter of the zone of inhibition was measured in millimetres. The strains were classified in accordance with the Clinical and Laboratory Standards Institute [38 ], following the standard antibiotic disc chart.
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9

Antibiotic Susceptibility Testing of Staphylococcus aureus

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Antibiotic susceptibility was tested using a disk-diffusion method. Briefly, the bacterial culture was calibrated to a turbidity of McFarland Standard No. 0.5 (about 1 × 108 colony-forming units [CFU]/mL) and swabbed onto Mueller–Hinton agar (MHA) (HiMedia Laboratories). The plates were allowed to dry for 3 min, and an antibiotic disk was placed on the swabbed surface of the agar. The following antibiotics were tested: oxacillin(30μg), penicillin (10 U), cefoxitin (30 μg), ciprofloxacin (5 μg), levofloxacin (5 μg), ofloxacin (5 μg), tetracycline (30 μg), erythromycin (15 μg), clindamycin (2 μg), linezolid (30 μg), and gentamicin (10 μg) (HiMedia Laboratories).
The methicillin sensitive S. aureus subsp. aureus Rosenbach (Seattle 1945) from the American Type Culture Collection (ATCC) No. 25923 was used as a quality control strain. Experiments were conducted and interpreted following Clinical and Laboratory Standards Institute (CLSI) guidelines [14 ]. The antibiotic resistance of each isolate from the disk-diffusion test was recorded independently and multiple-antibiotic resistance (MAR) indices were calculated. The MAR index is defined as “a/b, where a represents the number of antibiotics to which the isolate was resistant, and b represents the number of antibiotics to which the isolate was exposed” [15 (link)].
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10

Antibiotic Susceptibility Profiling

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Antibiotic susceptibility testing was done by Kirby Bauer disc diffusion method for different classes of antimicrobial agents such as ampicillin (10 µg), cefuroxime (30 µg), erythromycin (30 µg), clindamycin (2 µg), amikacin (30 µg), ciprofloxacin (5 µg), linezolid (30 µg), and teicoplanin (30 µg). Methicillin resistance was detected by cefoxitin (30µg) and oxacillin (1µg) disc (Himedia, Mumbai, Maharashtra, India) as per Clinical and Laboratory Standards Institute (CLSI 2019) guidelines (CLSI-M100-S29).
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Minimum inhibitory concentration (MICs) of linezolid (MicroExpress, Goa, India) and vancomycin were determined by agar dilution method in accordance to CLSI 2019 guidelines.
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