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47 protocols using ly294002

1

Modulating Fibronectin-1 Signaling in Trophoblasts

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JEG-3 or BeWo cells transfected with nonsense siRNA were identified as the siNC group; siRNA-FN1-transfected JEG-3 or BeWo cells were identified as the siFN1 group; pcDNA3.1 vector-transfected JEG-3 or BeWo cells were identified as the NC group; pcDNA3.1-FN1-transfected JEG-3 or BeWo cells were identified as the FN1 group. LY294002 (PI3K/Akt signaling pathway inhibitor) was purchased from MedChem Express and insulin-like growth factor-1 (IGF-1; PI3K/Akt signaling pathway activator) was purchased from PeproTech, Inc. After the JEG-3 cells were pre-treated with LY294002 (5 µM) for 4 h, pcDNA3.1-FN1 were then transfected into the JEG-3 cells (FN1 + LY294002). After the BeWo cells were pre-treated with IGF-1 (5 µM) for 4 h, siRNA-FN1 was then transfected into the BeWo cells (siFN1 + IGF-1).
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2

Aging Nerve Cell Culture with EPO

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Cells in the control group were cultured for a total of 22 days and represented aged nerve cells. In the EPO group, starting on day 11, the culture medium was supplemented with EPO (final concentration, 100 µ/ml; PeproTech, Rocky Hill, Connecticut, USA). In the EPO + LY294002 group starting on day 11, the culture medium was supplemented with EPO (final concentration, 100 µ/ml; PeproTech) and LY294002 (final concentration, 5 μM; vehicle: DMSO, the final concentration of DMSO was 0.05%; Selleck, Houston, Texas, USA). In the LY294002 group, on day 11, the culture medium was supplemented with LY294002 (final concentration, 5 μM; Selleck).
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3

Stepwise Hepatic Differentiation of hADSCs

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hADSCs between passage 3 and 7 were planted at a density of 2–3 × 104 cells/cm2 on collagen I-coated dishes (Invitrogen) and cultured in expansion medium at 37 °C with 5 % CO2. Once the cells reached 100% confluence, they were incubated with 10 % FBS RPMI-1640 (Gibco) medium containing 1 μM ATRA for 24 h. The cells were then incubated with serum-free RPMI-1640 medium containing 100 nM IDE1, 3 μM CHIR99021, and 10 μM LY294002 (Selleckchem) for 24 h. Next, the cells were then incubated with serum-free RPMI-1640 medium containing 100 nM IDE1, 10 μM LY294002, 250 nM LDN-193189, and 20 ng/mL FGF4 (PeproTech) for 2 days and then changed to serum-free RPMI-1640 medium containing 100 nM IDE1, 10 μM LY294002, and 20 ng/mL FGF4 for 24 h. The medium was changed to Williams’ E (Gibco) supplemented with 150 ng/mL hepatocyte growth factor (HGF; Sino Biological), 20 ng/mL FGF4, 30 ng/mL oncostatin M (OsM; PeproTech), 2 × 10−5 mol/L dexamethasone (Dex, Sigma-Aldrich), and 1% ITS (Sigma-Aldrich). The differentiation medium was changed every 2 days.
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4

Investigating NRG-1β Signaling Pathways

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The established cocultures were randomly divided into the following groups with the corresponding treatment: (1) NRG-1β: The coculture was treated with NRG-1β (20 nmol/L, Peprotech, Rocky Hill, NJ). (2) NRG-1β + PD98059: ERK1/2 inhibitor PD98059 (10 μmol/L, Cell Signaling Technology) was applied 30 min prior to NRG-1β (20 nmol/L) treatment. (3) NRG-1β + LY294002: PI3K inhibitor LY294002 (10 μmol/L, Invitrogen) was applied 30 min prior to NRG-1β (20 nmol/L) treatment. (4) NRG-1β + AG490: JAK2 inhibitor AG490 (10 μmol/L, Invitrogen) was applied 30 min prior to NRG-1β (20 nmol/L) treatment. (5) Control group: The cells were cultured continuously in media. All aforementioned incubation conditions were maintained in 37 °C and 5% CO2 environment with the corresponding agents for 4 days with media change every 2 days.
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5

Evaluating Osteoblastogenic Activity via ALP Staining

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ALP staining was performed to evaluate osteoblastogenic activity (29 (link)). hFOB1.19 osteoblasts (5×104 cells/well) were cultured in a 6-well plate and treated with TGF-β1 (0, 0.5, 1, 2, 5 and 10 ng/ml), in the presence or absence of a PI3K/AKT inhibitor (10 µM LY294002; PeproTech, Inc., Rocky Hill, NJ, USA) or an inhibitor of mammalian target of rapamycin/S6 kinase 1 (mTOR/S6K1; 100 nM rapamycin) (30 (link)). Following incubation for 7 days at 37°C, osteoblasts were washed with PBS two times, fixed in 4% paraformaldehyde (PFA) for 10 min at room temperature and washed with deionised water twice. Cells were incubated with a 5-bromo-4-chloro-3-indolyl-phosphate/nitro blue tetrazolium (BCIP/NBT) ALP colour development kit (Beyotime Institute of Biotechnology, Haimen, China) for 1 h at 37°C and washed with deionised water two times. Then, images were acquired using a phase contrast microscope equipped with a charge-coupled device (CCD) camera (magnification, ×100). Image-Pro Plus 6.0 (Media Cybernetics, Inc., Rockville, MD, USA) was used to evaluate the percentage of the total stained area.
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6

Investigating PI3K Signaling Pathway

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SFN and H2O2 were purchased from Sigma-Aldrich (St. Louis, MO, USA). All antibodies were obtained from Cell Signaling Technology (Danvers, MA, USA). Cell culture reagents were offered from Gibco (Grand Island, NY, USA). Inhibitor of phosphatidylinositol 3-kinase (PI3k), LY294002, was purchased from PeproTech (NJ, USA).
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7

Orbital Fibroblast Isolation and Characterization

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Primary human OFs were isolated and cultured using established explant techniques.7 (link) Samples were from either TED patients undergoing orbital decompression surgery (herein referred to as Graves' OF or GOFs) or non-TED patients undergoing unrelated orbital surgery (herein referred to as non-TED or NOFs) at the Flaum Eye Institute. The non-TED patients did not have any inflammatory orbital diseases. Relevant clinical information including history of smoking, steroid use, and radiation treatment are listed in the Table. Once established, fibroblasts strains were characterized as previously described.3 (link),8 (link),31 (link) Sample collection followed the tenets of the Declaration of Helsinki and were approved by the Research Subjects Review Board at the University of Rochester Medical Center. Informed, written consent was obtained from all patients before surgeries. Explanted OFs were cultured in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal bovine serum (FBS) and antibiotics. All media and supplements were from Gibco (Carlsbad, CA, USA) and FBS was from Hyclone (Logan, UT, USA). LY294002, a specific PI3K/Akt inhibitor, was from Peprotech (Rocky Hill, NJ, USA).
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8

Embryoid Body Formation Assay

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CM or human ESCs were detached from MEF feeder layers, and 3 × 10 5 cells were processed for EB formation assay on a low-cell-binding 12-well multidish (Nalge Nunc International KK, Tokyo, Japan) in Stemline II medium (Sigma-Aldrich) containing bone morphogenetic protein 4 (BMP4, 50 ng/mL; R&D Systems, Minneapolis, MN), and vascular endothelial growth factor (VEGF, 50 ng/mL; PeproTech), with or without 5 or 10 μmol/L LY294002 (Santa Cruz Biotechnology, Santa Cruz, CA) or 1 μmol/L bisperoxovanadium(HOpic) [bpV(HOpic), Calbiochem, CA]) on day 0. On day 2, one-half of the medium was removed and replaced with fresh medium containing the following additives (final concentrations): BMP4 (50 ng/mL), VEGF (50 ng/mL), stem cell factor (SCF, 20 ng/mL; PeproTech), thrombopoietin (TPO, 20 ng/mL; PeproTech), and FMS-like tyrosine kinase 3 ligand (FLT3L, 20 ng/mL; PeproTech) with or without 5 or 10 μmol/L LY294002, or 1 μmol/L bpV(HOpic). On day 4, the medium was removed, and fresh medium containing SCF (50 ng/mL), TPO (50 ng/mL), and FLT3L (50 ng/mL) was added; half of the medium was replaced with fresh medium containing the same cytokines every 2 days (Fig. 1A).
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9

Modulation of PI3K/Akt Pathway in Cancer Cells

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The PI3K inhibitor ly294002 and the Akt inhibitor MK2206 were purchased from Sigma‐Aldrich. Approximately 24 hours before transfection, miR‐92b mimics‐transfected BGC823 cells were plated in 6‐well plates at 35%‐55% confluence. Cells were then transfected with the PI3K inhibitor ly294002 or Akt inhibitor MK2206 at a working concentration of 50 nM or 5 µM, respectively, using Lipofectamine 2000 (Invitrogen) according to the manufacturer's protocol. After 48‐72 hours, the cells were collected for subsequent experiments.
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10

Preparation and Handling of Common Pharmacological Agents

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Stocks of 10 mM PP242 (Sigma, #P0037), 25 mM Latrunculin A (Enzo, #BML-T119–0100), 10 mM Ulixertinib (MedChemExpress, #HY-15816), 50 mM LY294002 (Invitrogen, #PHZ1144), 10 mM ZSTK474 (Cell Signaling, #13213), 10 mM Y27632 (Enzo, #ALX-270–333-M001), 25 mM Latrunculin B (Enzo, #BML-T110–0001), 1 mM Jasplakinolide (Enzo, #ALX-350–275-C050) and 10 mM Rapamycin (Cayman, #13346) were prepared by dissolving the chemicals in DMSO. The stocks were diluted to the indicated final concentrations in culture medium or live cell imaging medium. The EGF stock solution was prepared by dissolving EGF (Sigma, #E9644) in 10 mM acetic acid to a final concentration of 1 mg/ml. Insulin (Sigma #I-1882) was resuspended at 10 mg/ml in sterile ddH2O containing 1% glacial acetic acid. Hydrocortisone (Sigma #H-0888) was resuspended at 1 mg/ml in 200 proof ethanol. Cholera toxin (Sigma #C-8052) was resuspended at 1 mg/ml in sterile ddH2O and stored at 4°C. All drug stocks except Cholera toxin were stored at −20°C.
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