The largest database of trusted experimental protocols

6 protocols using ab192239

1

Quantitative Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The expression of CDKN2C and β-tubulin was assessed by western blot as described5 (link) using a monoclonal rabbit anti-CDKN2C Ab (anti-p18 INK4c, ab192239, Abcam, 1:1000), a rabbit polyclonal anti-β-tubulin Ab (GTX101279, Gentex, 1:3000), and a rabbit polyclonal anti-glyceraldehyde 3-phosphate dehydrogenase (anti-GAPDH; ab9485, Abcam, 1:2500), respectively. Peroxidase-AffiniPure Goat Anti-Rabbit IgG (H+L) (Jackson Research 111-035-144, 1:10,000) was used as a secondary Ab. Protein expression was assessed using the ChemiDoc™ Imaging System (BioRad).
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The RIPA buffer was used to extract the total protein (Solarbio, Beijing, China). Protein quantification was done with the BCA Protein Quantification Kit (Vazyme). After that, following electrophoresis by SDS-PAGE, the separated proteins (50 µg) were electroblotted from the gel on PVDF membranes (Sigma-Aldrich). followed by an overnight treatment at 4 °C with primary antibodies: CDKN2C (ab192239, Abcam, Cambridge, USA), Cyclin D1 (60186-1-Ig, Proteintech, Wuhan, China), RB1 (ab181616, Abcam), p-RB1 (ab184796, Abcam), CDK4 (11026-1-AP, Proteintech), Bcl-2 (12789-1-AP, Proteintech), BAX (50599-2-Ig, Proteintech), and then 1.5-h interaction with secondary antibody (Abcam) at room temperature (RT). Chemiluminescence was seen with the ECL kit (Vazyme).
+ Open protocol
+ Expand
3

Western Blot Analysis of Protein Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were trypsinized, washed with phosphate- buffered saline (PBS) and lysed in Cell lysis buffer (20 mM Tris at pH 7.5, 150 mM NaCl, 1% Triton X-100, Sodium pyrophosphate, β-glycerophosphate, EDTA, Na3VO4, leupeptin). Equal amounts of protein were separated by 8 ~ 15% SDS-PAGE and transferred to polyvinylidene difluoride (PVDF) membranes (Roche). The membranes were blocked for 1 ~ 2 h at room temperature in PBST with 5% (w/v) non-fat milk and incubated overnight at 4°C with primary antibodies. After incubation with secondary antibodies, proteins were visualized with the ECL detection system (Thermo Fisher Scientific). The following antibodies were used: PRMT5 (P0493, Sigma), c-Myc (ab32072, ab56, Abcam), GAPDH (M171-3, MBL), PTEN (ab32199, Abcam), p21 (#2947, CST), p63 (ab124762, Abcam), p18 (ab192239, Abcam), p57 (ab75974, Abcam), HSP70 (#4873, CST), H4R3me2s (ab5823, Abcam) and Histone H4 (16047-1-AP, Proteintech).
+ Open protocol
+ Expand
4

Validating INK4 Expression in HCC

Check if the same lab product or an alternative is used in the 5 most similar protocols
Quantitative real-time polymerase chain reaction (qRT-PCR) and immunohistochemical staining were performed to confirm the expression of INK4 in HCC and adjacent tissues. Thirty patients diagnosed with HCC were randomly selected from the Second Hospital of Dalian Medical University, and patient information is presented in Supplementary Table S1. RNA was extracted from both HCC and adjacent tissues for cDNA amplification and qRT-PCR using the ThermoScript RT-PCR system (Invitrogen, Carlsbad, CA, USA) and StepOnePlus apparatus (Applied Biosystems, Foster City, CA, USA). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as an internal reference gene. The primer sequences for GAPDH and INK4 family members are listed in Supplementary Table S2. Immunohistochemical staining was performed to validate INK4 expression in HCC tissues. The following antibodies were used as primary antibodies: CDKN2A (ab108349, Abcam, Cambridge, UK), CDKN2B (AF0230, Affinity Biosciences, Cincinnati, OH, USA), CDKN2C (ab192239, Abcam), and CDKN2D (10272-2-AP, Proteintech, Rosemont, IL, USA). Goat antimouse Alexa fluor SP-9000 from ZSGB Biotechnology (Beijing, China) was used as a secondary antibody.
+ Open protocol
+ Expand
5

Quantifying Cytokine and Protein Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
IL-6 and TNF-α concentrations were quantified in 24 h culture supernatants by ELISA (eBioscience) following manufacturer’s instructions and analyzed on a multimode spectra microplate reader (Infinite 200, Tecan) with the Magellan software (Tecan).
Capillary-based “Simple Western System” (WES, ProteinSimple) was used according to the manufacturer’s protocol to quantify IL1-ß protein, using goat anti mouse IL-1b/ IL-1F2 (AF-401-NA, R&D systems, 1/250), and p18 protein, using rabbit monoclonal anti-p18 (ab192239, Abcam). Protein expression was normalized by ß-actin quantification using rabbit anti-mouse ß-actin (4970, CTS, 1/250) as described previously [15 (link)]. Briefly, protein extracts from 50000 sorted cells were adjusted to 0.15 mg/ml concentration. Separation and immunoprobing were performed automatically and the chemiluminescent signals were detected and analyzed by Compass software (ProteinSimple).
+ Open protocol
+ Expand
6

Western Blot Protein Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
The procedures were performed according to our previous study [47] . The primary antibodies used in western blot were as follows: anti-ACTIN (20536-1-AP, Proteintech), anti-ZFHX3 (PD010, MBL), anti-FTO (27226-1-AP, Proteintech), anti-MYC (TA150121, OriGene), anti-E2F2 (ab138515, Abcam), and anti-CDKN2C (ab192239, Abcam).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!