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Velocity ai v 3

Manufactured by Agilent Technologies

Velocity AI v.3.01 is a laboratory equipment product offered by Agilent Technologies. It is a software-driven system designed to analyze and process data. The core function of Velocity AI v.3.01 is to provide automated data analysis capabilities for research and scientific applications.

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5 protocols using velocity ai v 3

1

Deformable Imaging for Recurrent Disease

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Cases where local and/or regional disease were recorded had their immediate post-failure diagnostic images exported as DICOM files from the clinical PACS system to the treatment planning system, where radiological evident recurrent gross disease (recGTV) was manually contoured. For each patient, the recurrence CT was co-registered with planning CT using deformable image registration (DIR) techniques. DIR was performed using Velocity AI v.3.01 commercial software (Varian Medical Systems, Atlanta, GA) validated previously by our group (22 (link)). Subsequently, the deformation vector fields were applied to recGTVs to convert them into ‘deformed recGTVs’ and transferred to the planning CT (supplementary figure 1). Evaluation of deformed recGTVs relative to original planning target volumes and prescribed radiation dose was done using both volumetric and dosimetric assessment (23 , 24 ).
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2

Pretreatment CECT Imaging Protocol

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All available pretreatment contrast-enhanced computed tomography (CECTs) of the head and neck for the cohort were reviewed. The pretreatment CECT was a reconstruction of 1- to 5-mm-thick contiguous sections, (only 6 patients had CT scans in 5mm slices), field of view (FOV) = 12–18 cm, a 512 × 512-mm matrix, and the plane of section parallel to the true vocal cords. Pretreatment CECT images were imported into commercial image segmentation software (Velocity AI v.3.01, Varian Medical Systems, Atlanta, GA).
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3

Contrast-Enhanced CT Tumor Segmentation

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Pretreatment contrast-enhanced CT images were retrieved from the picture archiving and communicating system (PACS). Images were then imported into a commercial image segmentation software (VelocityAI v.3.01, Varian Medical Systems, Atlanta, GA). Primary tumors were manually contoured by two radiation oncologists with head and neck expertise (ASRM, CDF). Tumor volume measurements were collected by a medical student (JS).
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4

Retrospective Analysis of OPC Patients

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Our institutional database was retrospectively reviewed for patients with OPC who were treated at The University of Texas MD Anderson Cancer Center (Houston, TX) from 2005 to 2013 after institutional review board approval. Eligible patients who were diagnosed with OPC that was pathologically confirmed by either a biopsy or a surgical excision and who received their treatment on a curative intent were eligible. All patients with OPC were nonsurgically managed with radio-therapy with or without systemic therapy either in neoadjuvant or concurrent settings. Demographic, clinical, toxicity, and outcome data were collected for these patients.
For imaging data, contrast-enhanced CT scans at initial diagnosis before any active local or systemic treatment were retrieved to our commercially available contouring software (Velocity AI v3.0.1; Varian Medical Systems, Palo Alto, CA). The volumes of interest, including the gross primary tumor volumes, were manually segmented by a radiation oncologist in three-dimensional fashion and then inspected by a second radiation oncologist. The generated volumes of interest and CT images were exported in the format of DICOM and DICOM-RTSTRUCT to be used for radiomics features extraction.
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5

Volumetric Tumor Growth Kinetics Measurement

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All included patients had two sets of pretreatment CT scans available for review and analysis of volumetric data. The first CT scan was either done at an outside hospital for diagnostic and/or staging purposes or done at MD Anderson for diagnostic reasons. The second CT scan was performed after at least 2 weeks at our institution for diagnosis, staging, or radiotherapy planning. PET-CT scans were included, and segmentation was guided by PET if available. Volumetric data was collected using VelocityAI v.3.01 commercial software (Varian Medical Systems, Atlanta, GA) to segment primary tumor and significant nodal targets on both scans. Tumor volumes were initially measured by a medical student, and subsequently reviewed by two radiation oncologist with expertise assessing tumors of the head and neck (ASRM, CDF). Linear TGV and nodal growth velocity were calculated from the serial measurements as percentage tumor growth per days as illustrated in the following equation:
[Tumor volume at time point 2Tumor volume at time point 1Tumor volume at time point 1duration between both scans in days]×100
Additionally, volumetric tumor doubling time was calculated as described by Mordecai Schwartz15 (link):
tD=tlog 2logVt/V0
Where tD is volumetric doubling time, t is time gap between the two scans, Vt is tumor volume at time point 2, and V0 is tumor volume at baseline.
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