The largest database of trusted experimental protocols

3 protocols using collagenase type 1 and 4

1

Tumor Tissue Dissociation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
For tumor samples, we used methods that were recently described44 (link). In brief, tumors were trimmed, sliced into small pieces, and digested for 45–95 min with shaking. The enzymatic cocktail for tumor digestion consisted of serum-free Hyclone Leibovitz L-15 medium supplemented with 1% penicillin-streptomycin, collagenase type I and IV (170 mg/L = 45–60 U/mL), collagenase type II (56 mg/L = 15–20 U/mL), DNase I (25 mg/L) and elastase (25 mg/L), all from Worthington Biochemical.
+ Open protocol
+ Expand
2

Tumor Digestion Enzymatic Cocktail

Check if the same lab product or an alternative is used in the 5 most similar protocols
The enzymatic cocktail for tumor digestion consisted of serum-free Leibovitz L-15 media (Thermo Fisher Scientific) supplemented with 1% penicillin–streptomycin, Collagenase type I and IV (170 mg/L = 45–60 U/mL), Collagenase type II (56 mg/L = 15–20 U/mL), DNase-I (25 mg/L), and Elastase (25 mg/L; all from Worthington Biochemical). The culture media DMEM/F-12 1:1 (HyClone, Thermo Fisher Scientific) was supplemented with 2.5 mmol/L l-glutamine, 15 mmol/L HEPES buffer, 10% of embryonic stem (ES) cell screened FBS (HyClone, Thermo Scientific), penicillin (100 U/mL) and streptomycin (100 μg/mL), hereafter referred to as complete cell culture media. HLA-A*0201–restricted NY-ESO-1 (157–165, SLLMWITQV) peptide was synthesized by AnaSpec, Inc. PKH67 Green Fluorescent Cell Linker, PKH26 Red Fluorescent Cell Linker, and LPS were purchased from Sigma. Fc-engineered IgA2 antibodies containing the variable regions of the EGFR antibody cetuximab were developed by Dr. T. Valerius and Dr. G. Georgiou (25 (link)). Clinical-grade, rituximab, and cetuximab were obtained from the Pharmacy at the Hospital of the University of Pennsylvania (Philadelphia, PA).
+ Open protocol
+ Expand
3

Isolation and Processing of Murine Spleen, Tumor, and Lung Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Spleens were harvested in LPA Media (without BME), dissociated through 70-mm filters, and subjected to ACK lysis (Quality Biological) to obtain splenocytes for analysis. Tumors were harvested in RPMI with 5% FBS media, cut into small pieces, and incubated for 30 min at 37ºC and 300 rpm in a digestion cocktail composed of RPMI supplemented with 5% (v/v) FBS, 2 mg/mL Collagenase Type I and IV (Worthington Biochemical Corporation), and 40 U/mL DNase I (Calbiochem). Following digestion, tumors were ground through 70-mm filters, spun for 5 min at 500 g, and resuspended in media for cell counting and subsequent flow cytometry analysis. Mice serum was collected into serum tubes with separating gel (BD BioSciences), rested for 30 min, and centrifuged at 2000 rpm for 2 min. Supernatant was stored at − 20 ºC until analysis.
Lungs were collected, rinsed with PBS 1 × , and weighed. They were then transferred to gentleMACS M tubes (Miltenyi Biotec) and the appropriate amount of PBS 1X was added based on weight (80 μL of PBS 1 × for every 25 mg of tissue). The tissue was mechanically disrupted using the gentleMacs dissociator (Miltenyi Biotec), and 80 μL aliquots of tissue homogenate were stored in DNAse/RNAse free tubes at  − 80 ºC until further processing.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!