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Puro ires gfp

Manufactured by Addgene

Puro-IRES-GFP is a plasmid that contains the puromycin resistance gene and the green fluorescent protein (GFP) gene. The puromycin resistance gene allows for selection of cells that have successfully taken up the plasmid, while the GFP gene enables visualization of transduced cells.

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4 protocols using puro ires gfp

1

Cloning of Tumor Suppressor Genes

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TSG cDNAs (see Supplementary Table S10) were cloned, by PCR (using primers listed in Supplementary Table S9) followed by restriction enzyme digestion, into MSCV PIG (Puro-IRES-GFP) (Addgene plasmid 18751). For some genes, a 3xFlag tag sequence was incorporated into the primers for cloning in-frame with the target gene. For further details, please refer to the Supplementary Methods.
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2

Culturing Leukemia and Control Cell Lines

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Leukemia cell lines were obtained from ATCC and DSMZ. Leukemia cell lines were grown in RPMI supplemented with FCS 10% and penicillin-streptomycin. The media for SKNO-1 also included GM-CSF 10 ng/mL. The media for 32D cells included murine IL-3 1 ng/mL. HEK293T and 3T3 cells were grown in DMEM supplemented with FCS 10% and penicillin-streptomycin. GFP expressing K562 leukemia cells were generated by transducing K562 cells with MSCV PIG (Puro-IRES-GFP; Addgene plasmid #18751) retrovirus and selecting with puromycin.
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3

RNAi Knockdown and Overexpression of JMJD6 in pMSCs

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For RNAi knockdown studies, pMSCs were cultured to 50–60% confluency in 100-mm petri dishes and transfected with 30 nM of JMJD6 Silencer® siRNA duplexes (ID:23290, Cat # 4392420, Thermo Fisher Scientific, Waltham, MA, United States) or Silencer® Negative Control siRNA (Cat #4390844, Thermo Fisher Scientific) using jetPRIME® buffer (Polyplus transfection,TM Illkirch, France) for 24 h. For overexpression studies, the p6352 MSCV-CMV-CMV-Flag-HA-JMJD6 plasmid [Addgene, Cambridge, MA, United States; Plasmid 31358 (Rahman et al., 2011 (link))] was obtained as previously described (Alahari et al., 2015 (link)). Mutant JMJD6 plasmids were generated by site-directed mutagenesis against JMJD6 WT plasmids by mutating histidine 187 and aspartic acid 189 to alanine (H187A and D189A, respectively) (Alahari et al., 2018 (link)). Empty Vector control (EV) consisted of a MSCV PIG (Puro IRES GFP) (Plasmid 18751, Addgene) plasmid on an empty vector backbone. Plasmid (0.5 μg or 1.0 μg) was used for transfection studies in pMSCs. All plasmids were validated by sequencing.
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4

Overexpression Vectors for PHD3 and RFP

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PHD3-overexpression vectors were constructed by PCR-amplifying mouse
PHD3 (Egln3) using CloneAmp HiFi PCR Premix (Clontech) from a plasmid
containing full-length PHD3 (MmCD00320451) using primers containing BamHI
and Sal I restriction sites. The digested insert was ligated into pLenti CMV
GFP Blast (659-1) using Quick Ligase (NEB BioLabs) according to the
manufacturer’s instructions. Resulting ligation reactions were
transformed in Stbl3 E. coli for vector propagation and
validation. RFP-overexpression vectors were constructed in the same way, but
using primers containing Xho I and EcoR V restriction sites. The digested
insert was ligated into MSCV-PIG (Puro-IRES-GFP, Addgene #18751), which was
digested with the same enzymes, to replace GFP with RFP. For the generation
of B16-OVA-RFP cells from B16 melanoma cells, plasmids were generated by
replacing the puromycin resistance cassette with OVA and replacing GFP with
RFP in the MSCV-PIG plasmid.
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