The largest database of trusted experimental protocols

Violetdye

Manufactured by Thermo Fisher Scientific
Sourced in United States

Violetdye is a laboratory reagent used for staining and visualization purposes. It is a synthetic dye that can be used to label and detect target molecules or cellular structures in various applications, such as microscopy and flow cytometry. The core function of Violetdye is to provide a violet-colored signal that can be detected and analyzed using appropriate instrumentation.

Automatically generated - may contain errors

5 protocols using violetdye

1

Adoptive Transfer of Naïve OT-1 T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The CD8+ T cells were isolated from
Rag−/− OT-1 TCR transgenic mice using a CD8
isolation kit (Miltenyi Biotec, Auburn, CA). The CD44+ cells
were depleted using biotinylated anti-mouse CD44 (1:2000 dilution, BioLegend,
San Diego, CA) and anti-biotin beads (Miltenyi Biotec). The naïve
CD8+ OT-1 T cells were labeled with either CFSE or violet
dye (both from Invitrogen, Grand Island, NY) at 5 μM. Ten microliters of
CFSE-labeled cells (1×108 ml−1) were
directly injected into the vaginal tissue (Ivag) using a Hamilton syringe with a
32G needle. One hundred microliters of violet dye-labeled cells
(1×107 ml−1) were injected into the
tail vein (IV). The mice were under isoflurane general anesthesia during the
performance of dual transfer.
+ Open protocol
+ Expand
2

Adoptive Transfer of Naïve OT-1 T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The CD8+ T cells were isolated from
Rag−/− OT-1 TCR transgenic mice using a CD8
isolation kit (Miltenyi Biotec, Auburn, CA). The CD44+ cells
were depleted using biotinylated anti-mouse CD44 (1:2000 dilution, BioLegend,
San Diego, CA) and anti-biotin beads (Miltenyi Biotec). The naïve
CD8+ OT-1 T cells were labeled with either CFSE or violet
dye (both from Invitrogen, Grand Island, NY) at 5 μM. Ten microliters of
CFSE-labeled cells (1×108 ml−1) were
directly injected into the vaginal tissue (Ivag) using a Hamilton syringe with a
32G needle. One hundred microliters of violet dye-labeled cells
(1×107 ml−1) were injected into the
tail vein (IV). The mice were under isoflurane general anesthesia during the
performance of dual transfer.
+ Open protocol
+ Expand
3

Isolation of Neonatal Mouse Endothelial Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brains of neonatal mice were dissected to remove pial membrane and minced into 1-2mm fragments in cold PBS. Then tissues were dissociated in Type IV collagenase (400U/ml, Worthington) and DNase I (32U/ml, Worthington) in PBS with Ca2+ and Mg2+ (Hyclone) at 37 °C on a rotator for 30 min. After disaggregation, cells were washed in cold PBS and passed through a 40-μm filter followed by centrifugation for 5min at 500g. Supernatant was discarded and cell pellet was resuspended in 20%BSA and centrifuged at 1000g for 15min to remove the myelin. The red blood cells were lysed with RBC lysis buffer. Afterwards, the cells were washed in PBS and stained with the Violet Dye (Invitrogen, L34955) to exclude dead cells according to the manufacture’s instruction. After washing in PBS, the cells were blocked with CD16/32 (eBioscience, 14-0161) and stained with CD31-APC (eBioscience, 17-0311) to label endothelial cells at 4°C for 30 min. The stained cells were analyzed using a FACS Aria II Flow Cytometer (BD Bioscience).
+ Open protocol
+ Expand
4

Apoptosis induction in U266 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To investigate the combination of HDACis with CIK cells on the apoptosis of the U266 cell line, 4 × 106 tumor cells were labelled with 1.25 μm Violet dye (Thermo Fisher Scientific, Eugene, USA) in 1 mL PBS for 20 min at 37°C in the dark. This was followed by two washes with 5 mL culture medium (containing 10% FBS) to remove excess Violet dye. Subsequently, a common number of cells (5 × 104 per well) were co‐cultured with CIK cells at the E:T ratio of 20:1 in a 48‐well round‐bottom plate at 37°C with 5% CO2. panobinostat or romidepsin at a concentration of 0.01 μm was added to each well. After 20 h of co‐incubation, cells were stained with the FITC Annexin V Apoptosis Detection Kit with 7‐AAD (BioLegend, catalogue no: 640922) and measured by FACS Canto II. At least 10 000 Violet‐labelled tumor cells were collected in each sample.
+ Open protocol
+ Expand
5

SARS-CoV-2 S Protein Binding Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
In ADCP experiment, CD14+ monocytes (Allcells) were cultured and differentiated for 7 days to obtain macrophage cells. Macrophages were labeled with violet dye (ThermoFisher), and Jurkat cells with stable SARS-CoV-2 S expression were labeled with CFSE dye (ThermoFisher). 75,000 Jurkat cells were added to macrophage cells in a 96-well plate in the presence of 2G1 or the isotype control antibody. After incubating at 37 °C for 30 min, the macrophages were digested and fixed with 4% paraformaldehyde, and the proportion of double-positive cell populations was analyzed by flow cytometry.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!