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3 protocols using anti tim3 apc

1

Mesothelin Expression on Human T-cells

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CAR Mesothelin surface expression on human T-cells was assessed using primary antibody goat anti-human IgG F (ab’)2 Biotin (BioRad, Hercules, CA) along with secondary conjugate Streptavidin APC (BioRad). The following antibodies were also used in FACS buffer in this study: anti-PD1-PE (Biolegends 329906), anti-CCR7-Alexa-fluor 647 (BD 560921), anti-CD8-FITC (BC A07756), anti-CD8-BV421 (BD 562428), anti-HLA-A2-FITC (BD 551,285), anti-CD86-PerCp-Cy5.5 (BD 561129), anti-CLDN6-Dylight 650 (IMAB027), anti-idiotype-IMAB027- Alexa-fluor 647, anti-TIM3-APC (Biolegends 345011) and 7AAD (BC A07704). Mesothelin expression was detected using the PE conjugated anti mesothelin antibody (R&D system FAB32652P). Acquisition and analysis of all samples were performed on a BD FACS CantoI/II (BD Biosciences, San Jose, California) and FlowJo software (v7.6.1).
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2

Multiparameter Flow Cytometry Protocol

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The following monoclonal Abs were used in flow cytometry: anti-CD45 (30–11, APC-Cy7, PE), anti-CD8 (Ly-2, V450), anti-CD4 (RM4-5, V500) anti-CD44 (IM7, Alexa 700) anti-mouse OVA257-264 (SIINFEKL) peptide bound to H-2Kb (PE), anti-CD326 (EPCAM) (9C4; FITC), anti-CD24 (30-F1, PE-Cy7), anti-CD69 (H1.2F3, PerCP/Cy5.5), anti-CD61 (Ebioscience, 2C9.G3; FITC) anti-PDGRFα CD140α (Abcam, 16A1; PE); anti-Ly6C PE, anti-Ly6G BV785, anti-Foxp3 Alexa 488, anti-F4/80 Pe-Cy7, anti-CD206 BV650, anti-CD11b Percp Cy5, anti-CD86 BV605, anti-CD80 APC-Cy7, anti-IFNγBV650, anti-GrzB Alexa647, anti-TNFα BV605, anti-NKp46 Alexa 488, anti-CD107a Pe-Cy7, anti-CD29 Percp Cy5, anti-PD-1 PE, anti-Tim3 APC, anti-Lag3 Percp Cy5 and anti-CD11c Alexa 700 (all from Biolegend). The flow cytometry analyses were performed using a BD Fortessa Flow Cytometer (BD Biosciences) and analysed using either BD FACS Diva software V.5.0.1 (BD) or FlowJo (Tree Star). For the in vivo studies, the following endotoxin-free Abs were used: anti-CD8 (BioXcell; 2.43), anti-βigh3 18B3,51 (link) anti-PD-1 and control polyclonal mouse Ig (BioXcell).
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3

Comprehensive Flow Cytometry Immunophenotyping

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For flow cytometry analysis, tumor and blood samples were stained with a cocktail of monoclonal mouse anti-human conjugated antibodies (mAbs): anti-CD45-PercP (clone HI30), anti-CD3-PercP (HIT3a), anti-CD3-APC (UCHT1), anti-CD19-PE (HIB19), anti-CD15-PE (HI98), anti-CD161-FITC (HP-3G10), anti-CD4-FITC (OKT4), anti-CD8-PE (HIT8a), anti-HLA-DR-APC (L243), anti-CD127-PE-Cy7 (A019D5), anti-CD1c-APC-Cy7 (L161), anti-CD163-PE (GHI/61), anti-CD206-APC-Cy7 (15–2), anti-PD-1-FITC (EH12.2H7), anti-PD-L1-APC (29E2A3), anti-CTLA4-PE (L3D10), anti-CD69-APC-Cy7 (FN50), anti-Tim3-APC (F38-2E2), anti-IL-8-APC (E8N1), anti-IFN-γ-PE (4S.B3), anti-IFN-γ-APC-Cy7 (4S.B3), anti-Granzyme B-FITC (QA16A02), anti-IL-1β-FITC (JK1B-1), anti-IL-2-PE-Cy7 (MQ1-17H12), anti-IL-6-APC (MQ2-13A5), anti-IL-17-FITC (BL168), anti-IL-23/IL-12-PE (C11.5), anti-TGF-β-APC (TW4-6H10), all from Biolegend; anti-IDO-PE (eyedio) and anti-IL-10-FITC (BT-10), both from eBioscience; anti-CD25-PE (MEM-181) and anti-CD11b-FITC (LT11) from ImmunoTools.
The antibodies used for immunofluorescence were: mouse monoclonal anti-human CD8 (32-M4) from Santa Cruz Biotechnology and rabbit polyclonal anti-human HLA-DRA from Sigma Aldrich.
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