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46 protocols using ad gfp

1

Adenoviral Modulation of Chondrocyte Differentiation

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On day 3 of culture, micromasses were transduced with adenoviruses expressing Cre recombinase (Ad-Cre, Vector Biolabs) or green fluorescent protein (Ad-GFP, Vector Biolabs) at 1000 MOI. For experiments without inhibitors, cells were collected 48 hr following transduction for RNA and protein extraction and matrix staining with Alcian blue. The MEK (Mapk/Erk Kinase) inhibitor, U0126 (1 μM, Millipore 662005), or vehicle (0.01% v/v DMSO) was added to IMC micromass cultures 48 hr after adenoviral transduction. RNA and protein extracts and plates for Alcian blue staining were collected 24 hr later. For Dusp6 overexpression experiments, micromasses were transduced simultaneously with Ad-Cre or Ad-GFP (1000 MOI) and either Ad-GFP or Ad-Dusp6 (Vector Biolabs) (1000 MOI). RNA, protein extracts, and plates for Alcian blue staining were collected 48 hr later.
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2

Human PPARγ Adenoviral Transduction

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HPASMC monolayers were grown at 37°C in a 5% CO2 atmosphere in culture media (SmGM-2, Lonza) containing 5% fetal calf serum, growth factors, and antibiotics. Human PPARγ in adenovirus (Ad-hPPARγ) or Ad-GFP (Vector Biolabs, Philadelphia, PA) were applied to cells at 3-28 MOI (Ad-GFP was applied at 3 MOI and Ad-PPARγ was applied at 28 MOI) for 4 hours in 2% FBS media. Media were replaced with fresh SmGM-2 media, and HPASMC were cultured for 72 hrs.
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3

Adenoviral Transduction of BEAS-2B Cells

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BEAS-2B cells (1X104) were infected with human CHOP (abm, Richmond BC, Canada), in adenovirus (Ad-CHOP) or Ad-GFP (Vector Biolabs, Philadelphia, PA, USA) at a multiplicity of infection (MOI) of 1 in growth media containing 2% serum for 5 hours as we recently reported. After incubation with adenoviral vectors, cells were washed twice with sterile PBS then transferred into regular growth media without antibiotics.
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4

Adenoviral Delivery of STMN1 in Mice

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A control adenovirus that expresses green fluorescent protein (AdGFP; #1060) and an adenovirus that expresses mouse STMN1 (AdStath; #273354) were commercially obtained (Vector Biolabs, Malvern, PA). Adenoviruses were amplified in HEK293 cells (American Type Culture Collection, Manassas, VA), isolated, and titered by plaque assay, as described.19 Mice received 2.5 × 108 plaque‐forming units/mouse of adenovirus intravenously by tail vein. To detect E1A‐positive wild‐type adenovirus contamination, plaque assays were performed in A549 cells (American Type Culture Collection).
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5

Isolation and Adenoviral Transduction of Hepatic Stellate Cells

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HSCs isolated from SMO-flox male mice were cultured for 3 days, and then starved in serum-depleted medium for overnight. Adenoviruses harboring either the GFP gene (AdGFP, Vector Biolabs, Malvern, PA, USA) or Cre recombinase gene (AdCre, Vector Biolabs) were added to these pHSCs at a multiplicity of infection (MOI) of 80, as described previously16 (link). After 24 hours, virus-containing medium was aspirated and replaced with fresh medium. Viral efficiency of AdGFP infection was assessed by fluorescent microscope, with >95% of infected cells found to be GFP positive.
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6

Ad-siBAG3 Transduction of NRVCs

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NRVCs were transduced with Ad-siBAG3 (Vector Biolabs, Malvern, PA) in reduced volumes of FBS-free DMEM at 37 °C for 2 hours. The medium was then replaced with DMEM with 2% FBS and 25 µg/ml gentamicin. As an internal control, cells were transduced with Ad-GFP (Vector Biolabs, Malvern, PA). Transduced cardiomyocytes were subjected to other treatments 3 or 5 days post transduction.
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7

VEGF Regulation of Mandibular Ossification

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Mandibles of E15.5 wild-type (WT) embryos were dissected in Hanks Balanced Salt Solution (HBSS, Sigma-Aldrich) and cultured in osteogenic medium containing β-glycerophosphate (8 mM; Sigma-Aldrich) and l-ascorbic acid phosphate (50 μg/ml; Wako), or in osteogenic medium supplemented with 10 ng/ml of VEGF164. Medium was replaced twice during the culture period. The mandibles were harvested on day 7 and subjected to Alizarin Red and Alcian Blue staining. Mandibular ossification was analyzed and quantified as described above. The entire experiment was repeated once and consisted of a total of 10 control and 10 VEGF164 treated mandibles.
Mandibles of E15.5 Vegfafl/fl embryos were dissected in HBSS and infected with either Ad-Cre or Ad-GFP (Vector Biolabs) for 24 h followed by culture in osteogenic medium. Protein was harvested from mandibles after 4 day culture for VEGF ELISA and Western Blotting analysis. Additional mandibles were infected with Ad-Cre and cultured in osteogenic medium (n = 3) or in osteogenic medium supplemented with 10 ng/ml of VEGF164 (n = 3). After 7 days of culture, the mandibles were subjected to Alizarin Red and Alcian Blue staining, and mandibular ossification was analyzed.
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8

Knockdown of TRAF3IP2, NLRP3, and NF-κB in SMCs

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Adenoviral vector expressing short hairpin RNA (shRNA) targeting human TRAF3IP2 (ad.TRAF3IP2 shRNA) was custom generated at Vector Biolabs (Malvern, PA). Ad.GFP (#1060, Vector Biolabs) served as a non-targeting control. For adenoviral transduction, cells were traduced with adenoviral vectors at moi10 for 1 h in basal medium and then switched to complete medium for 24 h. Lentiviral vectors expressing shRNA targeting human NLRP3 (Product type: SHCLNV-NM_004895, TRC# TRCN0000432208; Target sequence: CCGGGTGGATCTAGCCACGCTAATGCTCGAGCA TTAGCGTGGCTAGATCCACTTTTTTG) and SGLT2 (SLC5A2; Product type: SHCLNV-NM_003041, TRC# TRCN0000043603, Target sequence: CGGGCATATTTCCT GCTGGTCATTCTCGAGAATGACCAGCAGGAAATATGCTTTTTG) were purchased from Millipore-Sigma. Lentiviral shRNA targeting p65 subunit of NF-κB (#sc-29410-V) and c-Jun subunit of AP-1 (#sc-29223-V) were purchased from Santa Cruz Biotechnology, Inc., and have all been previously described ([11 (link)]). For lentiviral infection, SMC at 50–60% confluency were infected with the indicated shRNA at a multiplicity of infection (moi) of 0.5 for 48 h in complete media. To increase transfection efficiency, cells were cotreated with Polybrene® (5 μg/ml in water), a cationic polymer. Neither adenoviral or Lentiviral shRNA nor Polybrene® modulated SMC adherence, shape, or viability (trypan blue-dye exclusion; data not shown).
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9

Isolation and Culture of Intervertebral Disc Cells

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Briefly, the NP tissue organs were isolated from the NP region of IVDs in the spinal column from the first lumbar spine to the tenth tail region (23 (link)). The dissected NP tissues were briefly rinsed in sterile PBS and immediately placed in 6-well cell culture plates containing culture medium (10% FBS in αMEM with penicillin and streptomycin). NP tissues from IFT80fl/fl mice were infected with adenovirus (Ad) either Cre (Ad-CMV-Cre, #1405, Vector Biolabs) or GFP (Ad-GFP, #1060, Vector Biolabs) for 24 h as described in (12 (link)). The deletion efficiency of IFT80 was confirmed by RT-PCR analysis.
For OAF cell culture, the OAF was isolated as described previously (24 (link)). In brief, OAF tissues were digested initially with protease (53702–25KU, EMD Millipore) for 1 h with agitation on a shaker, followed by collagenase-P (11213865001, Sigma-Aldrich) for another 12 h at 37 °C. The digested cells were washed twice with PBS and cultured in DMEM (Gibco) supplemented with 10% FBS and 1% penicillin–streptomycin to 80%–90% confluence at 37 °C and 5% CO2. OAF cells from IFT80fl/fl mice were infected with Adenovirus-Cre (Ad-Cre) as described previously to delete IFT80 gene, and cells infected with Adenovirus-GFP (Ad-GFP) served as a control (12 (link)).
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10

Lung Explant Culture and Analysis

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Lung explants were cultured at 37°C for 48 hours on a semipermeable membrane (25 mm in diameter, 8-μm pore; Whatman) floating on Dulbecco’s modified Eagle’s medium (DMEM)/F-12 medium (Hyclone) supplemented with 5% fetal bovine serum (FBS; Gemini Bioproducts). Pharmacological inhibitors were added directly to the culture medium at the indicated concentrations: SAG (5 μM; Calbiochem), cyclopamine (1 μM; Tocris), forskolin (5 μM; Sigma-Aldrich), nifedipine (20 μM; Sigma-Aldrich). The medium was replaced after 24 hours. For time-lapse analysis of mesenchymal cell rearrangements, recombinant adenovirus encoding GFP (AdGFP; Vector Biolabs) was injected into the mesenchyme using a hollow glass needle and a pressurized injection system (PV 820 Pneumatic PicoPump, World Precision Instruments). Time-lapse imaging was carried out in a stage-top incubator mounted on the microscope to maintain temperature (37°C) and humidity. Proliferation was visualized using an EdU kit (Thermo Fisher Scientific); EdU was added to the culture medium for 15 min before fixation.
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