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7 protocols using vectasheild

1

Muscle Fiber Typing Immunostaining

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Twelve 12-μm thick cryosections from gastrocnemius muscles were mounted on glass microscope slides, were allowed to come to room temperature, with no fixation, and outlined in PAP pen. Immune staining was done using an automated stainer (BioGenex i6000 Automated Staining System, San Ramon, CA, USA) which performed the following steps at room temperature. Tissue sections were blocked with 10% goat serum, 0.1% Tween 20-TBS for 1 h, incubated with mixture of two primary antibodies (MHC Type I (BA-D5) and MHC Type IIA (SC-71); Developmental Studies Hybridoma Bank, University of Iowa, Iowa City, IA) diluted 1:50 in TBS for 1 h, followed by three consecutive washes with TBS for 20 min. Sections were then blocked for 30 min, incubated with mixture of two goat anti-mouse IgG secondary antibodies (Alexa Flour 594 Mouse IgG1 for detecting SC-71 and Alex Flour 488 Mouse IgG2b for detecting BA-D5; Life Technologies) diluted 1:200 in TBS, washed three times with TBS for 20 min, and mounted with Vectasheild (Vector Labs, Burlingame, CA). Images were captured using a Zeiss Axioskop 2 microscope (Zeiss, Thornwood, NY).
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2

Antibody Staining Protocol for Drosophila Ovaries

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Antibody staining was performed according to the standard procedures15 (link). Ovaries were dissected from female flies of respective ages in Phosphate Buffer Serine (PBS) and fixed with 4% paraformaldehyde in PBS for 15 min at room temperature. Fixed samples were blocked with 2% bovine serum albumin, 0.1% Tween 20, and 0.1% Triton X-100 in PBS for 30 min. The following primary antibodies were used: mouse anti-Hts antibody [1:5; Developmental Studies Hybridoma Bank (DSHB), 1B1], chick anti-Vasa antibody (1:500; lab stock) and rabbit anti-active Caspase3 antibody (1:500; Abcam, ab13847). For secondary antibodies, we used goat anti-chicken IgY conjugated with Alexa Fluor 488 or 633 (1:500; Thermo Fischer, A-11039, A-21103, respectively) , anti-mouse IgG conjugated with Alexa Fluor 546 (1:500; Thermo Fischer, A-11003) and anti-rabbit IgG conjugated with Alexa Fluor 488 (1:500; Thermo Fischer, A-11008). Primary and secondary antibody incubation was performed overnight at 4 °C. We used a mixture of 2% bovine serum albumin, 0.1% Tween 20, and 0.1% Triton X-100 in PBS an antibody diluent. Stained ovaries were mounted in Vectasheild (Vector Laboratories) and imaged with a confocal microscope (TCS SP5; Leica Microsystems).
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3

Structured Illumination Microscopy of Sperm

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Structured illumination microscopy (SIM) imaging was performed with Zeiss LSM710 Elyra P1 using alpha Plan-APO 100X/1.46 oil objective lens. Samples were prepared as described in Sperm Immunocytochemistry with a minor modification in that the immunostained sperm coverslips were mounted with VectaSheild (Vector laboratory). 2D SIM images were taken using a laser at 642 nm (150 mW) for Alexa647 (Invitrogen). The images were acquired using 5 grid rotations with a 51 nm SIM grating period. For 3D SIM images, a laser at 561nm (200 mW) was used for Alexa 555-plus (Invitrogen). Z stack was acquired from 42 optical sections with a 100 nm interval. Each section was imaged using 5 rotations with a 51 nm grating period. Both 2D and 3D SIM Images were rendered using Zen 2012 SP2 software.
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4

Immunohistochemical Analysis of TSPO, GFAP, IBA-1

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Fixed hemibrains were cryoprotected in 30 % sucrose, frozen, and sectioned in the horizontal plane at 20 μM using a cryostat. Sections were soaked in PBS for 5 min, then immunolabeled with antibodies directed against TSPO (rabbit monoclonal, 1:1000; Abcam), glial fibrillary acidic protein (GFAP; rat monoclonal, 1:1000 dilution, 2.2B10, Zymed), or anti-ionized calcium-binding adaptor molecule-1 (IBA-1; rabbit polyclonal, 1:1000 dilution, WAKO). Non-specific staining was blocked in blocking reagent (PerkinElmer) for 1 h at room temperature, then immunolabeled overnight at 4 °C with primary antibodies. Sections were then washed three times in PBS for 5 min and then incubated with anti-rabbit or anti-rat IgG biotin (1:1000) for 1 h at room temperature. Immunoreactivity was visualized using tetramethylrhodamine-labeled tyramide signal amplification (PerkinElmer). Sections were mounted with VectaSheild (Vector Laboratories), and coverslips were sealed with enamel. Photomicrographs were captured with a fluorescence microscope/digital camera (BZ-X700, Keyence) at ×20 magnification and then thresholded at a predetermined, constant value using NIH Image 1.61 to create a binary image identifying positive and negative immunolabeling and the intensity assessed.
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5

Immunofluorescent Visualization of F-actin

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Cells were cultured on sterile, untreated glass coverslips, as above, in the presence or absence of HDL (100 µg protein/ml) for different times. The cells were then washed twice with PBS, fixed with 3% paraformaldehyde pH 7.4 for 30 min and permeabilized with 0.1% Triton-X100 for 5 min. at room temperature. F-actin was stained using 25units/ml Alexafluor488 phalloidinin PBS for 30 min at room temperature. The coverslips were then mounted using Vectasheild (Vector Laboratories Canada Inc. Burlington, ON, Canada) and imaged using a Zeiss Axiovert 200 M fluorescence microscope with standard FITC filters using a 40× objective.
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6

Nanoparticle and Evans Blue Uptake Protocol

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Nanoparticle
solutions contained 107 particles/mL (FluoSpheres ) in
colloidal media (0.1% DMSO in RPMI 1640 with 10% FBS) or free drug
media (1% DMSO and 0.025% UP 80 in RPMI 1640 with 10% FBS). For Evans
blue uptake studies, Evans blue solutions (50 mM) were made in the
same media formulations above (colloidal and drug free media). Cells
were seeded at 10,000 cells/cm2 and allowed to adhere overnight
with nanoparticle solutions. For Evans blue permeabilization studies,
cells were first treated with 0.25% Triton-X 100 in RPMI 1640 for
1 h, washed, and then treated with Evans blue solutions. After incubation
for 24 h, cells were washed several times with DPBS, fixed in 4% paraformaldehyde
(PFA) for 1 h, and mounted in media containing DAPI (Vectasheild,
Vector Laboratories, Burlingame, CA).
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7

Detecting K48 and K63 Ubiquitin Chains

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Presence of K48 and K63 chains were determined using K48 and K63 specific antibodies. Co-localization of each chain with MOs was determined using chain antibodies co-stained with 1CB4 antibodies. Embryos were extracted from one day adults by cutting them open on poly-L-lysine-coated slides. Slides were placed in liquid nitrogen for 5 minutes and then fixed with methanol at −20° C for 20 minutes. Slides were incubated in primary antibody overnight at 4° C and then incubated with secondary for 2 hours at room temperature. Primary and Secondary antibodies were diluted in PBST:30% NGS (normal goat serum) and washes were done in PBST (PBS with 0.5% Tween-20). Vectasheild (Vector Labs, Burlingame, CA) plus DAPI was used as the mounting medium. Slides were observed using the LSM 700 confocal microscope equipped with Zen Black software.
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