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6 protocols using triton x 100 t8787

1

Custom-Arrayed Anticancer Library Evaluation

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A custom-arrayed anticancer library was used [36 (link)]. Oxaliplatin came from Accord Healthcare (Ahmedabad, India). Sunitinib (PZ0012), crizotinib (PZ0191), 5-fluorouracil (F6627), everolimus (SML2282), rapamycin (R8781), plicamycin (M6891), staurosporine (S5921), thapsigargin (T9033) methotrexate (M7824), and DMSO were purchased from Sigma-Aldrich. The MAD2 inhibitor M2I-1 (312271-03-7) was from Cayman. Everolimus (HY-10218) and plicamycin (HY-A0122) for in vivo experimentation were purchased from MedChemExpress. Hoechst 33342 (H3570) and Lipofectamine® 2000 were purchased from Thermo Fisher Scientific. Propidium iodide (P4864), formaldehyde (F8775), and Triton X-100 (T8787) were purchased from Sigma-Aldrich (St. Louis, MO, USA).
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2

Detergent Preparation for Biochemical Assays

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Triton X-100 (T8787) and Tween-20 (P2287) detergents were purchased from Sigma Aldrich and diluted to obtain 10% stock solutions by weighing (w/v). A sodium Dodecyl Sulfate (SDS) 10% solution was purchased from Invitrogen (Waltham, MA, USA, 15553027). All subsequent dilutions annotated in figures were made from these stocks. Ammonium chloride solution (ACS) was from Stemcell Technologies (Vancouver, BC, Canada, 07800).
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3

Quantifying Bacterial Loads in Murine Skin Wounds

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The experiments were conducted essentially as described by Vingsbo et al.42 Female BALB/c mice, 10–12 weeks old (Taconic, Ejby, Denmark), were anaesthetized and shaved on a 2–3‐cm2 skin area of the lower back. A disposable 7‐mm dermal curette (Integra, York, PA, USA) was used to induce a minor superficial skin wound on a 1‐cm2 area, which was inoculated with ∼7 log10 CFU of bacteria. Four days after inoculation and treatment, the mice were sacrificed and the entire infected skin area with underlying tissue was cut out and homogenized in 1 ml of saline using gentleMACS™ C‐tubes (Miltenyi Biotec, Lund, Sweden) on a Dispomix® Drive (Medic Tools AG, Zug, Switzerland) running at 4000 rpm for 10 s. Tissue homogenates were serially diluted 10‐fold in saline containing .1% Triton X‐100 (T‐8787; Sigma‐Aldrich Inc., St Louis, MO, USA). Then, 20‐μl spots were applied in duplicate to NaCl agar supplemented with polymyxin B (SSI Diagnostica). In addition, 100 μl of the 10−2 dilution was spread on a separate plate to increase sensitivity and minimize the risk of a false negative due to carry over of high drug concentrations from the wound. Plates were incubated at 35°C in ambient air for 20–48 h.
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4

Fluorescence Microscopy Staining Protocol

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DAPI (4′, 6-diamidino-2-phenylindole) (D-1306), the surfactants Tween-20 (P7949), NP40 (NP40S) and Triton X-100 (T8787), potassium cyanate, deoxyribonuclease I (D5025) were from Sigma. Vectashield™ mounting media (H-1000) was from Vector Labs. Non-immune donkey (017-000-121 or horse serum (008-000-121) were obtained from Jackson Immunoresearch Labs. Bovine serum albumin (BP1600100) as well as all general chemicals used for these studies were from Thermo Fisher, San Diego, CA, USA.
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5

Porcine Collagen-Gellan Gum Hydrogel Fabrication

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Porcine type I collagen was kindly donated from Nippon Ham (Osaka, Japan). Gellan gum (GG) (Mw = 500 kDa) was obtained from Sansho (Osaka, Japan). Fibrinogen (from bovine plasma, F8630), thrombin (from bovine plasma, T4648), bovine serum albumin (BSA, A3294), phosphate-buffered saline powder (PBS, D5652), collagenase from Clostridium histolyticum (type I, C0130), and Triton X-100 (T8787) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Fetal bovine serum (35010CV) was purchased from Corning (Corning, NY, USA). Penicillin, streptomycin, BODIPY™ 500/510 C1, C12 (4,4-Difluoro-5-Methyl-4-Bora-3a,4a-Diaza-s-Indacene-3-Dodecanoic Acid (D3823)), goat anti-mouse secondary antibody Alexa Fluor® 647, and Hoechst 33324 (H3570) were obtained from Thermo Fisher Scientific (Waltham, MA, USA). The 4% paraformaldehyde (PFA, 16310245) and mouse anti-human CD31 antibody (M0823) came from Wako Pure Chemical Industries (Tokyo, Japan). The human umbilical vein endothelial cell (HUVEC, C25271) and endothelial growth medium (EGM-2MV, CC-3202) were purchased from Lonza (Basel, Switzerland). The Nile Red compound was purchased from Tokyo Chemical Industry (TCI, Tokyo, Japan). Dulbecco's Modified Eagle's Medium (DMEM) came from Nacalai Tesque Inc. (Kyoto, Japan). Cell-Based Propidium Iodide Solution (10011234) came from Cayman Chemical (Ann Arbor, MI, USA).
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6

Detecting ROS in Primary Astrocytes

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ROS detection kit (CA1410; Solarbio, Beijing, China) was employed for examining ROS in primary astrocytes. DCFH-DA was diluted with serum-free culture medium according to 1:1000 to make the final concentration 10 μmol/L. After 48 h of drug treatment, astrocytes were incubated with 300 μl DCFH-DA at 37°C for 30 min. Then, astrocytes were washed with PBS to eliminate DCFH-DA which did not enter the astrocytes. In the culture plate, the slides with the climbed cells were immersed in PBS. Primary astrocytes were permeabilized through 0.5% Triton X-100 (T8787; Sigma, USA) at room temperature lasting 20 min as well as the slides were immersed in PBS. After absorbing the PBS with absorbent paper, normal goat serum (C0265; Beyotime, Shanghai, China) was added dropwise on the glass slide, and blocked for 30 min at room temperature. DAPI was added dropwise and incubated for 5 min in the dark to stain the nucleus, and the excess DAPI (D9542; Sigma, USA) was washed away with PBST. Following absorbing the liquid on the slide, the slides were mounted with a mounting solution containing anti-fluorescence quencher, and then observed and collected the images under a BX53 fluorescence microscope (Olympus, Japan).
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