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Anti γ h2ax

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Anti-γ-H2AX is a laboratory product that targets the phosphorylated form of the histone variant H2AX (γ-H2AX). It is commonly used as a molecular marker for DNA double-strand breaks.

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12 protocols using anti γ h2ax

1

Quantifying DNA Damage and Repair in Cancer Cells

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HCT116 colon cancer cells were treated with siATICa or Cpd14 for 48 hours followed by radiation exposure at 2 Gy. Cells were collected at 1, 2, 6, 24 and 48 hours, plated on coverslips, fixed with 4% paraformaldehyde, permeabilized with 0.5% Triton-X 100, blocked in 10% FBS, and incubated with anti-γ-H2AX (Santa Cruz, Dallas Texas) (1:300) for 1 hour at room temperature. The coverslips were washed, blocked with 10% FBS and incubated with an AlexaFluor-488 secondary antibody (1:400, Invitrogen, Carlsbad CA) for 45 minutes at room temperature. Coverslips were washed a final time and mounted on slides using Prolong Gold anti-fade reagent containing DAPI (Applied Biosystems, Carlsbad CA). Foci were imaged using a Zeiss fluorescent microscope equipped with an AxioVision camera and software. Cells were scored as positive if they contained 4 or more foci/nuclei. In order to measure the initial induction of DSB following radiation, cells were collected at 1 hour after radiation exposure and foci/nuclei were scored. In order to measure DSB repair, cells were collected at 1, 2, 6, 24, 48 hours after radiation exposure and scored for the reduction of foci relative to the 1 hour time point.
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2

Protein Damage and Repair Analysis

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Proteins samples were obtained with a lysis buffer containing protease/phosphatase inhibitor and separated with the SDS-PAGE gel. Semi-dry gel system was used to transfer protein samples to a nitrocellulose membrane. Following a PBS washing done twice, the membrane was incubated with primary antibodies including anti-γ-H2AX, H2AX, 53BP1 and RAD51 (Santa Cruz) at 4 °C overnight and then incubated with a second antibody (Santa Cruz). β-actin was chosen as an internal control. Protein images were observed with an ECL solution under an imaging analysis software.
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3

Comprehensive Antibody Catalog for Research

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In this work, the following antibodies were used: primary antibodies: anti-hnRNP UL1 (Abcam #ab68480 or Santa Cruz Biotechnology #sc-393434), anti-FLAG (Sigma #A8592), anti-Actin (MP #691001), anti-Fibrillarin (Santa Cruz Biotechnology #sc-25397), anti-Nucleolin (Abcam #ab22758), anti-FUS (Santa Cruz Biotechnology #sc-47711), anti-γH2A.X (Santa Cruz Biotechnology #sc-517348), anti-RPS6 (Abcam #ab70227), anti-RPS15 (Antikoerper #ABIN2786563), anti-RPA32 (Bethyl Laboratories #A300-245A), anti-pChk1 (Cell Signaling Technology #2341), anti-XRCC1 (Invitrogen #MA5-13412), anti-53BP1 (Abcam #ab175933), anti-Rad50 (Abcam #ab124682), anti-RPA194 (Santa Cruz Biotechnology #sc-46699), normal mouse IgG (Santa Cruz Biotechnology #sc-2025), and anti-digoxygenin-AP Fab fragments (Roche #11093274910); secondary antibodies: goat anti-mouse IgG-horseradish peroxidase (HRP) (Santa Cruz Biotechnology #sc-516102), goat anti-rabbit IgG-HRP (Santa Cruz Biotechnology #sc-2004), anti-mouse Alexa Fluor 555 (Thermo Fisher Scientific #A21422), anti-mouse Alexa Fluor 488 (Thermo Fisher Scientific #A32723), anti-rabbit Alexa Fluor 555 (Thermo Fisher Scientific #A32732) or anti-rabbit Alexa Fluor 488 (Thermo Fisher Scientific #A32731).
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4

Immunofluorescence Assay for γH2AX

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Cells were washed with PBS, fixed in 4% paraformaldehyde for 20 min at RT, permeabilized with 0.1% Triton X-100 in PBS for 10 min at RT, then incubated with an anti-γH2AX (Santa Cruz Biotechnology, Santa Cruz, CA, USA) in 2% FBS/0.01% Triton X-100/PBS and labelled with an anti-rabbit Alexa-Fluor 594 antibody (Thermofisher Scientific, Waltham, MA, USA). Nuclei were stained with 1 μg/mL DAPI (Sigma-Aldrich, St. Louis, MO, USA). Fluorescence microscopy analysis was carried out using a Nikon TE2000 microscope (Minato, Tokyo, Japan) through a 60× oil immersion objective.
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5

Immunofluorescence analysis of DNA damage

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PC12 cells were fixed with 4% (v/v) paraformaldehyde in PBS for 30 min and then permeabilized with 1% Triton-X100 for 10 min. Next, the cells were blocked with 1% BSA in PBS for 1 h and incubated with a rabbit polyclonal anti-γ-H2AX (1∶100, Santa Cruz Biotechnology, Santa Cruz, CA, USA) or a mouse monoclonal anti-8-oxo-dG (Trevigen, Gaithersburg, MD) antibody. Thereafter, the cells were incubated with a FITC-conjugated goat anti-rabbit or anti-mouse antibody (1∶300, ICN Cappel, Aurora, Ohio, USA). F-actin staining was performed following incubation with FITC–phalloidin (1∶100, Abcam, Cambridge, MA, USA). DAPI was used to visualize the nuclei. The slides were mounted and examined using a confocal microscope (Nikon, Melville, NY, USA).
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6

Investigating DNA Damage Response Signaling

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N6-isopentenyladenosine (iPA) (Sigma-Aldrich, St. Louis, MO) was dissolved in DMSO and added to cell cultures at the indicated concentration. For Western blot analysis the following antibodies were used: anti-RAD51, anti-pCHK1 (S345), rabbit anti-pCHK2 (T68), anti-p-ATM (S1981), anti-p-BRCA1 (S1524), anti-p-ATR (S428), anti-p-AKT (S473), anti-PARP, anti- p-JAK2 (Tyr 1007/1008), anti-JAK2, anti-NF-κB p65 (D14E12), and anti-Caspase-3 were purchased from Cell Signaling Technology (Danvers, MA), anti-CHK2, anti-STAT5 a/b, anti-H2AX, anti-γ-H2AX (Ser139), anti-β-actin, anti-BRCA1, anti-p-STAT5a/b (Tyr 694/699), anti-p-p38 (Tyr182) were purchased from Santa Cruz Biotechnology (Dallas, TX), anti-CHK1 from Abcam (Cambridge, UK), anti-BCL-2 and anti-p38 from Sigma-Aldrich Inc. (St Luis, MO). For fluorescence microscopy anti-RAD51 (Cell Signaling Technology, Danvers, MA), anti-γ-H2AX (Santa Cruz Biotechnology Dallas, TX) and Alexa Fluor 488 donkey anti-rabbit IgG (Jackson ImmunoResearch, Cambridge, UK) and DyLight 594 goat anti-mouse IgG (Abcam, Cambridge, UK) were used. STAT5a/b-siRNA and scramble-siRNA were purchased from Santa Cruz Biotechnology (Dallas, TX).
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7

Western Blot Analysis of Protein Markers

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The primary antibody, anti-CAMR1 (1:1,000; sc5418), was purchased from Upstate Biotechnology (Lake Placid, NY, USA). Anti-Bax (1:1,000; clone 6A7), anti-Bcl-2 (1:1,000; Cat sc-509), and anti-γ-H2AX (1:1,000; Ser139) were acquired from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-β-actin (1:10,000; A1978) was obtained from Sigma-Aldrich (Louis, MO, USA). All these antibodies are monoclonal antibodies. Cells were harvested and total proteins were isolated with RIPA reagents (Thermo Scientific, Rockford, IL, USA), according to the manufacturer’s instruction. Subsequently, protein concentrations were detected using the BCA kit (Pierce, Rockford, IL, USA). Western blot analysis was performed following previous protocols.20 (link) Briefly, protein specimens were isolated by a 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to polyvinylidene fluoride membranes (Millipore, Billerica, MA, USA). After blocking in Tris Buffered saline with Tween (TBST) buffer with 5% BSA for 2 h at 37°C, the membranes were incubated with primary antibodies overnight at 4°C. Following washing in TBST, the membranes were further incubated with secondary antibody labeled with horseradish peroxidase for 1 h at room temperature. The proteins were visualized using the Image Quant software (Molecular Dynamics, Sunnyvale, CA, USA).
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8

Protein Extraction and Western Blot Analysis

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Total proteins were extracted using the ProteoPrep Total Extraction Sample Kit (Sigma-Aldrich, USA). Western blot was performed using the primary antibodies, followed by horseradish peroxidase-conjugated secondary antibodies and detection by an enhanced chemiluminescence reagent (Pierce, USA). The primary antibodies used were anti-γH2AX, anti-Nrf2, anti-NQO-1, anti-HO-1, and anti-GAPDH from Santa Cruz Biotechnology (Santa Cruz, USA), anti-caspase-3 and anti-Chk1 from Cell Signaling Technology (CST, USA), and anti-caspase-8 and anti-caspase-9 from Becton Dickson (BD, USA). Secondary antibodies were from Cell Signaling Technology (CST, USA).
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9

Immunofluorescence Imaging of DNA Damage Markers

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Immunofluorescence was performed as previously reported [51 (link)]. Cells were fixed in 2% formaldehyde and permeabilized in 0.25% Triton X100 in PBS for 5 min at room temperature. For immunolabeling, cells were incubated with primary antibody, washed in PBS and incubated with fluorophore-conjugated secondary antibodies. The following monoclonal primary antibodies were used: anti-TRF1, anti-ATR, anti-γ-H2AX, anti-53BP1, anti-Mer11 and anti-hTERT, (Santa Cruz Biotechnology, Inc.). Rhodamine- or DyLightTM488-conjugated goat anti-rabbit and fluorescein- or DyLightTM594-conjugated goat anti-mouse (ZSGB-BIO) served as secondary antibodies. Fluorescence signals were captured using an Olympus Fluoview FV1000 confocal microscope and analyzed using the FV10-ASW 1.6 Viewer program (Olympus, Japan).
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10

Immunohistochemical Analysis of APE1 and γ-H2AX

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IHC was performed as described previously (18 (link)). Briefly, after deparaffinization and blocking, sections were incubated with primary antibodies at 4°C overnight. After washing with PBS, the sections were incubated with a secondary antibody for 1 h at RT. Then, 3,3′-diaminobenzidine (DAB) substrate was used to develop color, and hematoxylin was used for counterstaining. The primary antibodies were anti-APE1 (mouse monoclonal, cat. no. 17774, dilution 1:500; Santa Cruz Biotechnology, Inc.) and anti-γ-H2AX (rabbit monoclonal, cat. no. 9718, dilution 1:50; Cell Signaling Technology, Inc.).
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