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8 protocols using rorc cre

1

Mouse Strain Generation and Maintenance

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C57BL/6 and B6.SJL mice were purchased from Taconic Biosciences (Germantown, NY). A breeding pair of Rag2−/−IL-2Rγ−/− mice was purchased from Taconic Biosciences, and these mice were subsequently bred in-house. Rorc.cre and R26R-EYFP mice were purchased from The Jackson Laboratory (Bar Harbor, ME). Rorc.cre mice were bred with R26R-EYFP mice in-house to produce RORγt fate mapping mice. NFIL3−/− mice were a generous gift from Dr. Hugh JM Brady (15 (link)). NFIL3+/+, NFIL3+/−, and NFIL3−/− mice were subsequently bred in-house. All mice were maintained in pathogen free facilities at Brown University. Mice of both sexes were included and no differences were observed.
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2

Mouse Models for Colitis Studies

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Wild-type mice were purchased from Shanghai SLAC Laboratory Animal Co. Rag1–/–, Csf2−/−, Rorcgfp/gfp, Rorc-cre, Rosa26stop-YFP, and Thy1.1 mice were purchased from Jackson laboratory. Rag2−/−Il2rg−/− mice were purchased from Taconic Biosciences. Mice used for in vivo studies were littermate controlled and were 6–10 weeks old. Both male and female mice were used unless otherwise noted. All mice used in this study are on C57BL/6 background, and were maintained in specific pathogen-free conditions. In DSS-induced colitis, α-CD40-induced colitis and other in vivo experiments, littermate mice were co-housed since weaning and randomly separated into control and treatment groups to avoid variation in distribution of microflora. All mice were fed with a plain commercial diet (Silaikang, Shanghai). Mice were housed in corn-cob-bedding cages in a room with the light–dark cycle (lights on at 6:00 and off at 18:00). All animal experiments were performed in compliance with the guide for the care and use of laboratory animals, and were approved by the institutional biomedical research ethics committee of the Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences.
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3

Animal Welfare-Approved Mouse Breeding

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Adult C57BL/6 male mice were purchased from the Multidisciplinary Centre for Biological Investigation, Campinas-SP, Brazil. Rorc-Cre, Villin-Cre, and HIF-1alfafloxed/floxed mice were from The Jackson Laboratories. All strains were maintained in a C57BL/6 background and kept in regular filter-top cages with free access to sterile water and food. Animal procedures were approved by the Ethics Committee on Animal Use of the University of Campinas (protocol #5495–1/2020).
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4

Genetic Mouse Model Generation

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C57BL/6 wildtype mice were purchased from the Jackson Laboratory (Bar Harbor, ME). hCD2-Cre mice (Jackson Laboratory) were crossed with Raptorfl/fl mice and Rictorfl/fl mice (Jackson Laboratory)28 (link) to generate CD2-cre; Raptorfl/fl and CD2-cre; Rictorfl/fl conditional knockout (cKO) mice. c-Maffl/fl mice65 (link) were bred with Rorc-cre mice (Jackson Laboratory) to generate control c-Maffl/fl mice and Rorc-cre; c-Maffl/fl cKO mice. Male and female mice were used in all experiments (embryo and infant: E16-D1, adult: 6–12 weeks old) and were housed in specific pathogen free conditions. All animals were housed and treated in accordance with institutional guidelines and approved by the Institutional Animal Care and Use Committee at the University of Louisville, Louisville, KY.
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5

Mouse Husbandry and Animal Ethics

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Adult C57BL/6 male mice were purchased from the Multidisciplinary Centre for Biological Investigation, Campinas-SP, Brazil. Rorc-Cre, Villin-Cre, and HIF-1alfafloxed/floxed mice were from The Jackson Laboratories. All strains were maintained in a C57BL/6 background and kept in regular filter-top cages with free access to sterile water and food. Animal procedures were approved by the Ethics Committee on Animal Use of the University of Campinas (protocol #5495-1/2020).
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6

Genetic Manipulation of Murine Immune Cells

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Sox4fl/fl, Tcf7/, and Cd2476f/6f (all C57BL/6 background) mice were described previously (Hwang et al., 2012 (link); Malhotra et al., 2013 (link)). Rorc-Cre and Rag1−/− mice were purchased from Jackson Laboratories. Sox13 promoter–ECFP “knock-in” mice were generated in house, and its characterization is included in Spidale et al. (2018) . Mice were generally analyzed at 4–6 wk for thymic developmental studies and 8–12 wk for peripheral iNKT cell persistence and function. Mice were always age and sex matched within an experiment. All experiments were approved by the University of Massachusetts Medical School Institutional Animal Care and Use Committee.
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7

Conditional Knockout of Tyrosine Hydroxylase

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Th CKO mice were generated by breeding of RORc-Cre (stock no: 022791, purchased from Jackson Laboratory, Bar Harbor, ME) and Th flox mice [kindly provided by Dr. Ichinose and Champbon (12 (link), 13 (link))]. Th-CKO mice (Thfl/fl RORc-Cre+) and littermate control mice (Thfl/fl RORc-Cre-) were maintained in a specific pathogen-free facility at the Feinstein Institutes for Medical Research (FIMR). Wild type C57BL/6 mice and FOXP3-GFP (stock number 023800) were purchased from Jackson Laboratory. All the experiments strictly followed the guideline in the Guide for the Care and Use of Laboratory Animals of the National Institutes of Health, and the protocol was approved by the Committee on the Ethics of Animal Welfare of the FIMR (protocol number 2009-048).
Sample size and number of experiments to achieve adequate power was chosen based on previous studies with similar methods. We randomized the mice from different cages and different time points to exclude batch variation.
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8

Generation and Characterization of Conditional Knockout Mice

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Rag1−/−, Rorcgfp/gfp, Rorc-cre, Cd4-cre, Rosa26LSL-YFP/+, and B6-Thy1.1 mice were purchased from Jackson laboratory. Rag2−/−Il2rg−/ mouse was purchased from Taconic Biosciences. Smarca4flox/flox(Smarca4f/f) mouse was generated previously.43 (link)Rag1−/−Smarca4f/f mice were crossed to Rag1−/−Smarca4f/fRorc-cre mice to generate littermate Rag1−/Smarca4f/f and Rag1−/−Smarca4ΔILC3 mice, which were used for experiments in this study. Littermate Rag1−/−Smarca4f/f and Rag1−/Smarca4ΔILC3 mice were kept co-housed after weaning and during experiments. And for cases in which Rag1−/−Smarca4f/f and Rag1/−Smarca4ΔILC3 from different litters were used for experiments, they were gender/age matched and co-housed for more than 2 weeks. For mice of other genotypes used in this study, Brg1-deficient mice and control mice were littermate controlled and co-housed. Both male and female mice were used in this study. All mice were on C57BL/6 background and maintained in specific pathogen free facilities at Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences. All mice experiments were performed in compliance with the guide for the care and use of laboratory animals, approved by the institutional biomedical research ethics committee of the Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences.
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