The NIRS system included a broadband white light source (77501, Oriel Instruments Inc., USA), two 5 m long Hard-Clad Silica Core Multimode optical fibres
(FT1000EMT, Thorlabs Inc, USA) with a 1000 µm core diameter and 0.39 NA, a spectrograph (Shamrock 303i, Andor Technology Inc, Northern Ireland), and a CCD camera (
iDus 420, Andor Technology Inc, Northern Ireland). A GRIN lens with a 1.80 mm diameter and 0.55 NA (#64-525, Edmund Optics, USA) and a 90° prism with a leg length of 2 mm (#45-524, TECHSPEC NSF11, Edmund Optics, USA) were glued to the end of the fibers to collimate the light and direct it from the source fibre into the tissue and from the tissue into the detector fibre. Attenuation spectra were collected from the mouse cortex over the range 705–960 nm.
Hair was removed from the animal head, and the fibers, with a thin layer of glycerol
19
on the prisms, were secured on top of the head, near bregma, with the posterior edge of the prisms placed on the line between the two external auditory meatus (within 1 mm of the interaural line). Fibers were spaced with a black rubber separator (4 mm width) and secured by covering the area with masking tape connected to the outside of the MRI coil cradle.
Hashem M., Wu Y, & Dunn J.F. (2023). The relationship between cytochrome c oxidase, CBF and CMRO2 in mouse cortex: A NIRS-MRI study. Journal of Cerebral Blood Flow & Metabolism, 43(8), 1351-1364.