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7 protocols using cd117 apc

1

Immunophenotyping of Amniotic Fluid Mesenchymal Stromal Cells

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About 3 × 106 cells AFMSCs were incubated for 30 min at RT with fluorescent-conjugated antibodies against CD19-FITC (Biolegend, Cat# 306,204), HLA-DR-APC (Biolegend, Cat# 307,610), CD34-FITC (BD, Cat# 560,942), CD45-APC (BD, Cat# 555,485), CD11b-APC (Biolegend, Cat# 301,310), CD73-APC (Biolegend, Cat# 344,005), CD44-PE/CY7 (Biolegend, Cat# 103,029), CD29-PE (Biolegend, Cat# 303,003), CD117-APC (Biolegend, Cat# 313,206), CD105-PE (Biolegend, Cat# 800,503), CD90-PerCP/Cyanine5.5 (Biolegend, Cat# 328,117), PCNA-PE (Biolegend, Cat# 307,908) and Ki-67-APC (Biolegend, Cat# 350,513). AFMSCs were then rinsed twice with PBS and analyzed by flow cytometry (Thermo).
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2

Characterization of Mesenchymal Stem Cells

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Samples from four women were used in this step. The cells were evaluated according to the criteria for characterization of MSCs33 (link). Regarding adhesion to polystyrene and formation of fibroblast-like forming colonies, immunophenotypic15 characterization was done by flow cytometry by labeling the cells with the following antibodies: CD73-PECy7, CD90-FITC, CD105- FITC, CD19-PE Cy7, CD34-APC Cy7, CD45-APC, HLA-DR-PERCP Cy5.5, CD44-PERCP Cy5.5, CD49c-PE, CD151-APC, CD166-PE, CD117–APC, SSEA4-FITC, Oct4-PE (Biolegend, San Diego, CA), and NANOG-PERCP Cy5.5 (BD Pharmingen). The analysis was done in BD FACSCanto or BD FACSVerse and the results were analyzed using BD FACSDiva.
Analysis of differentiation into the three main mesenchymal lines was performed using adipogenesis, chondrogenesis, and osteogenesis StemPro differentiation kits (Gibco), according to the manufacturer's protocol. 0.5% oil Red O (Sigma-Aldrich), Alcian blue (Sigma-Aldrich), and Alizarin red (Sigma-Aldrich) were used respectively to observe adipogenesis, chondrogenesis, and osteogenesis.
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3

Isolation of SCC Cells from Tumor

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To sort SCC cells out of tumors formed from ISR-WT and ISR-null cells lines, day 35 tumors were dissected from the skin and finely minced in 0.25% of collagenase (Sigma) in HBSS (Gibco) solution. The tissue pieces were incubated at 37°C for 20 min by gently shaking. After a single wash with ice-cold PBS, the samples were further digested into single-cell suspension in 0.25% trypsin/EDTA (Gibco) for 10 min at 37°C. After neutralization with the FACS buffer (PBS supplemented with 4% FBS, 5 mM EDTA, and 1 mM HEPES), single-cell suspensions was then centrifuged, resuspended, and strained before preparing for staining. A cocktail of Abs for surface markers at the predetermined concentrations (CD31-APC 1:100, BioLegend; CD45-APC 1:200, BioLegend, CD117-APC 1:100, BioLegend; CD140a-APC 1:100, Thermo Fisher; CD29-APCe780, 1:250, Thermo Fisher, BioLegend) was prepared in the FACS buffer with 100 ng/mL DAPI. Sorting was performed using a BD FACSAria equipped with FACSDiva software to isolate a population of cells that was GFP-positive (pan-SCC), DAPI-negative (live), and APC-negative (dump gate to exclude immune cells, endothelial cells, and fibroblasts), and new cell lines were established from bulk populations of sorted cells.
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4

Multiparametric Flow Cytometry for Lineage Tracing

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Cellular composition of the liquid cultures and in vivo tissues were analyzed using flow cytometry. The following antibodies and recombinant proteins were used: Sca1-Pacific blue (PB), CD34-Phycoerythrin (PE), CD48-PE, CD150-PE.Cy7, Ter119 Allophycocyanin (APC)(all Biolegend), CD117-APC, CD16/32-APC.Cy7, CD11b-PE, Gr1-APC, CD3-PE.Cy7, CD71 PE (all BD Biosciences), CD19 Alexa Fluor 700 (AF700, Life) and CD117 PerCpCy5.5 (SONY). Lineage positive cells were detected using the murine lineage detection kit (BD Biosciences) subsequently stained with streptavidin-pacific orange (PO, Fisher Scientific).
SSEA4-PE (Biolegend) and Tra-1-60 Alexa Fluor 647 (AF647, BD Biosciences) were used for regular pluripotency screenings of the iPSCs. Hematopoietic induction of iPSC was assessed using CD34-PE and CD45-BV421 antibodies (both BD Biosciences). Dead cells were excluded by using 7-aminoactinomycin-D (7AAD, Life) or 4’,6-Diamidino-2-Phenylindole (DAPI, Fisher Scientific). Flow cytometry was performed using a BD LSRII flow cytometer (BD Biosciences). For subsequent cell sorting a FACSAria (BD Biosciences) was used. Analysis of FACS data was performed using FlowJo (TreeStar).
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5

Splenocyte Surface Immunophenotyping by Flow

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For cell surface analysis of splenocytes, harvested spleens were minced into small pieces in 1x PBS to release the blood cells, which were subsequently strained using 70 μm cell strainer (Fisher, Cat No. 352350) to prepare a single cell suspension. The strained mix was then subjected to centrifugation at 350 g for 5 min. Pelleted cells were resuspended in 1x PBS and spleen cell count was determined using hemocytometer. 0.25 μl of CD43-PE (Clone S11, BioLegend, Cat No. 143205), 0.5 μl of CD45-Alexa Fluor-488 (Clone 30-F111, BioLegend, Cat No. 103122), 1 μl of CD71-Brilliant Violet 421 (Clone RI7217, BioLegend, Cat No. 113813), and 2.5 μl of CD117-APC (Clone 2B8, BioLegend, Cat No. 105812) fluorescent conjugated primary antibodies were used to stain one million splenocytes in 100 μl 1x PBS for 20 min on ice in the dark. The stained cells were washed twice with 1x PBS. The cells were then resuspended in 500 μl of 1x PBS and analyzed using flow cytometer.
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6

Copper Nanoparticle-Induced Immune Response

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C57BL/6 mice (n = 4) were injected ip. with PBS (100 μL) or CuNP (200 μg/mouse/100 μL). After 1 h, peritoneal lavage cells were collected and studied by flow cytometry. The cells were stained with several cell surface markers in order to determine the recruitment of different populations. The antibodies used in the analysis were CD11b-PE, Gr1-FITC, F4/80-PerCP Cy5.5, CD19-PE, CD3-FITC, CD4-APC, NK1.1-PerCP Cy5.5, CD117-APC (Biolegend). Samples were acquired with a FACSCalibur flow cytometer (BD Biosciences) and data were analyzed using FlowJo software (Tree Star Inc., USA). The results were expressed as a percentage of live cells (mean ± SE, *p < 0.05 and ****p < 0.0001).
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7

Multiparametric Flow Cytometry of Lung Immune Cells

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Approximately 100 μl peripheral blood was collected from mice. After lysis of red blood cells, the cells were stained with different antibodies. Lung cells extraction and staining were performed as described previously [22] . We first cut the lungs in 15 ml tubes using small scissors. After cutting, we added cold RPMI 1640 (1 ml/pair of lungs), then placed the tubes on ice. Once all lungs were cut, pre-warmed (37 °C) 2× digestion medium was added to each tube (1 ml/pair of lungs). Next, the tubes were placed in a warm water bath (37 °C) and incubated under shaking for 45 min, followed by adding 10 ml cold MACS buffer was added to each tube. After filtering with a 100 μM cell strainer, osmotic lysis buffer (1 ml/pair of lungs) was added to the tubes and then incubated at room temperature for 2 min. Lastly, the cells were spun down and resuspended in MACS buffer. Antibodies: CD45 (APC-eFlour780), CD3e (Alexa Fluor700), CD5 (eFluor450), CD4 (PE), CD8a (BB515), CD25 (PE-Cy5.5), CD69 (PE-Cyanine7), CD44 (BV605), CD62L (APC), MHCII (FITC), Ly6G (Alexa Fluor700), NK1.1 (BV421), CD19 (PE-Cy5.5), CD11c (PE), CD11b (APC), CD5 (PE-Cy7), Foxp3 (PE) (eBioscience, Ltd., UK), CD4 (Biotin) (BD Pharmingen, San Diego, CA, USA), and CD117 (APC) (BioLegend, Inc, San Diego, CA, USA).
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