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9 protocols using mouse monoclonal anti occludin

1

Evaluating Epithelial Barrier Disruption

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After incubation with S. enteritidis or TNFα, transepithelial electrical resistance (TER) was measured, as described elsewhere [16 (link)]. Moreover, at the end of the incubation period with S. enteritidis, occludin and zonula occludens-1 (ZO-1) immunolocalization were evaluated. Briefly, Caco-2 monolayers were fixed, permeabilized, and blocked, as previously described [14 (link)]. Cells were incubated overnight with primary antibodies at 4 °C. Mouse monoclonal anti-occludin (1:50 dilution; Life Technologies) and rabbit polyclonal anti-ZO-1 (1:50 dilution; Life Technologies) were used as primary antibodies. Monolayers were then incubated for 45 min with Alexa dye-conjugated secondary antibodies (1:300 dilution; Alexa Fluor 488 donkey anti-rabbit and Alexa Fluor 555 goat anti-mouse, Life Technologies). Finally, cells were incubated with Hoechst (5 µL/mL, 5 min; Life Technologies) to view the nucleus and mounted in ProLong™ Gold Antifade Mountant. The samples were examined with a confocal laser scanning microscope (TCS-SP5; Leica Lasertechnik, GmbH, Germany) at the Centres Científics i Tecnològics of the Universitat de Barcelona. Images were processed by ImageJ software (public domain, National Institutes of Health). The nuclei of S. enteritidis were counted at the microvillous level.
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2

Immunostaining of Tight Junction Proteins

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Calu-3 cells grown on coverslips till confluency were incubated in serum free media for 8 hours and exposed to either Per a 10 or PBS for 16 hours. The coverslips were removed and cells fixed in cold methanol for 10 mins, blocked with 3% (w/v) BSA in PBS. The cells were permeabilized with 0.3% triton X 100 for 10 mins at 4 °C and blocked with BSA (10% w/v in PBS) for 1 hour at RT. Cells were stained with mouse monoclonal anti-occludin (Life Technologies, Carlsbad, CA, USA) or rabbit polyclonal anti ZO-1 antibody (Life Technologies, Carlsbad, CA, USA) diluted (1:200) in 3% BSA (w/v in PBS) for 1 hour at RT washed with PBS 3 times and incubated for 2 hrs with Alexaflour 488 labelled secondary antibody (Life Technologies, Carlsbad, CA, USA). These cover slips were mounted on slides and analyzed using fluorescent microscopy (Leica DMI 6000).
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3

Multiparametric Immunostaining Protocol

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The following primary antibodies were used: mouse monoclonal anti-E-Cadherin (BD Biosciences, Cat. No. 610181, 1:200), rabbit polyclonal anti-Ki 67 (Cell Signaling, Cat. No. 9027, 1:100), rabbit polyclonal anti-β-Catenin (Sigma, Cat. No. C2206, 1:50), rabbit polyclonal anti-detyrosinated tubulin (Abcam, Cat. No. 48389, 1:100), rabbit polyclonal anti-Pax8 (Proteintech, Cat. No. 10336-1-AP, 1:50), mouse monoclonal anti-acetylated tubulin (Sigma, Cat. No. 6-11-B1, 1:100), rabbit polyclonal anti-LGR6 (Antibodiesonline, Cat. No. ABIN122588, 1:100), mouse monoclonal anti-Ca 125 (Calbiochem, Cat. No. Ca1004, 1:100), mouse monoclonal anti-occludin (Invitrogen, Cat. No. 33-1500, 1:100) and rabbit polyclonal anti-vimentin (Cell Signaling, Cat. No. 5741, 1:100). We further used the following: Draq5 (Thermofisher Scientific, Cat. No. 62251), γ-secretase Inhibitor XX (Calbiochem, Cat. No. CAS 209984-56-5), β-oestradiol (Sigma, Cat. No. E2758) and progesterone (Acros Organics, Cat. No. Cas 57-83-0).
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4

Immunohistochemical Profiling of Epithelial Markers

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The following antibodies were used for immunohistochemistry and immunofluorescence: mouse monoclonal anti-pan-Cytokeratin (CK) AE1/AE3 (1:100, Abcam, Cambridge, MA), mouse monoclonal anti-CK 14 (1:100, Abcam), mouse monoclonal anti-CK 13 (1:10, Abcam), mouse monoclonal anti-occludin (1:100, Invitrogen, Camarillo, CA), and mouse monoclonal anti-ZO-1 (1:100, Invitrogen).
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5

Immunofluorescence Assay for β-catenin and Occludin

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10x104 cells were seeded on glass coverslips precoated with collagen in 24-well plates, allowed to attach overnight, and treated with SH extract according to protocol. For detection of β-catenin and occludin proteins, cells were exposed to UVB radiation, as described in the protocol above. After irradiation, cells were fed with fresh growth medium or used for experiment following the protocol. For immunofluorescence assay, 4 hours after the UVB irradiation, cells were washed, fixed with 4% formaldehyde, permeabilized with 0.1% Triton X-100 in PBS and stained for 1 hour at 37° C with different protein-specific antibody: mouse monoclonal anti-occludin Invitrogen Life Technologies, Waltham, MA, USA mouse anti-filaggrin (Sigma-Aldrich, St Louis, MO, USA). After PBS wash, cells were incubated with secondary antibodies/fluorescein isothiocyanate (Alexa Fluor 488 anti-mouse or Alexa Fluor 536 anti-rabbit immunoglobulin G, Molecular Probes, Invitrogen Life Technologies, Waltham, MA, USA) and with phalloidin for 1 hour at room temperature. Following 10 minutes of treatment with RNase, the coverslips were mounted on glass slides by using Mowiol 40–88 (Sigma-Aldrich, St Louis, MO, USA) added of propidium iodide. Images were acquired through confocal microscope LSM 800, magnification 60X, software ZN 2.1 blue Edition (Carl Zeiss, Jenza, Germany) and quantified using ImageJ software.
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6

Immunofluorescence and Western Blot Analysis of JAM-A

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Mouse monoclonal antihuman JAM‐A was purchased from NovusBio (Littleton, CO; #H00050848‐M01). Goat polyclonal antihuman JAM‐A (#AF1033) and goat polyclonal antimouse JAM‐A (#AF1077) were both purchased from R&D Systems (Minneapolis, MN). Mouse monoclonal antioccludin, mouse monoclonal antizonula occludens‐2 (ZO‐2), and donkey polyclonal antigoat IgG (H+L)‐Alexa Fluor® 488 were purchased from Thermo Fisher (#33‐1500, #37‐4700, and #A‐11055). Mouse monoclonal anti‐β‐actin and mouse monoclonal antimyosin light chain kinase (MLCK) were purchased from Sigma‐Aldrich (#A5441 and #M7905). Mouse monoclonal anti‐FLAG (Sigma‐Aldrich #F1804) was a kind gift from Dr. Chris Yun (Emory University, Atlanta, GA). Goat antimouse IgG‐HRP was purchased from Santa Cruz (Dallas, TX; #sc‐2005).
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7

Investigating Endothelial Cell Barrier Regulation

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Rabbit polyclonal anti-ZO-1, mouse monoclonal anti-occludin, and mouse monoclonal anti-claudin5 were obtained from Thermo Fisher Scientific (Waltham, MA, USA). Rabbit monoclonal anti-β-actin, anti-phospho-NF-κB p65, and anti-NF-κB p65 were purchased from Cell Signaling Technology (Danvers, MA, USA). Goat polyclonal anti-Axl, anti-Mertk, and rat monoclonal anti-Tyro3 antibodies were obtained from R&D Systems (Minneapolis, MN, USA). Rabbit polyclonal anti-phospho-Axl, anti-phospho-Mertk, and anti-phospho-Tyro3 were purchased from Affinity (Cincinnati, OH, USA). Horseradish peroxidase (HRP)-conjugated and Alexa Fluor-conjugated secondary antibodies were purchased from Biosharp (Hefei, China). Axl small interfering RNA (siRNA) or nonspecific control siRNA with the recommended transfection reagents were all from RiboBio (Guangzhou, China). LPS (O55:B5) was purchased from Sigma-Aldrich (Oakville, Ontario, Canada). The In Vitro Vascular Permeability Assay kit was obtained from Merck Millipore (Etobicoke, Ontario, Canada). Recombinant Mouse Gas6 protein was from R&D Systems (Minneapolis, MN, USA). The chemiluminescence (ECL) Western blot detection kit was from Wenke Biotechnology (Zhejiang, China).
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8

Immunoblotting and Immunofluorescence Assay

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Mouse monoclonal anti-β-actin was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Rabbit monoclonal anti-FAK, Rabbit monoclonal anti-FAK (phosphor Y397 & Y925), rabbit monoclonal anti-Src, and rabbit monoclonal anti-pSrc were obtained from Abcam (Cambridge, UK). Rabbit polyclonal anti-ZO-1 and mouse monoclonal anti-occludin were purchased from Thermo Scientific (Fremont, CA, USA). Mouse monoclonal anti-E-cadherin was obtained from BD Biosciences (San Jose, CA, USA). Mouse monoclonal anti-acetylated tubulin, Fluorescein isothiocyanate (FITC)--phallloidin, and FITC-dextran (4 kDa) were purchased from Sigma-Aldrich (Saint Louis, MO). Mouse monoclonal anti-MUC5AC was obtained from Thermo Scientific (Fremont, CA).
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9

Antibody Characterization for Cellular Analysis

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Mouse monoclonal anti-occludin (#33-1500) and rabbit polyclonal anti-ZO-1 (#40-2200) antibodies were purchased from ThermoFisher Scientific (Carlsbad, CA, USA). Mouse monoclonal anti-E-cadherin (#610404) and rabbit polyclonal anti-β-catenin (#610153) antibodies were purchased from BD Biosciences (San Jose, CA, USA). HRP-conjugated anti-mouse IgG (#12-349), HRP-conjugated anti-rabbit IgG (#12-348), anti-β-actin (#A5541) antibodies, AlexaFlour-488-conjugated anti-mouse IgG (#62197), Cy3-conjugated anti-rabbit IgG (#AP132C), rabbit polyclonal anti-JNK2(pT183/pY185) (SAB4300198) antibodies, and AlexaFlour-488-conjugated phalloidin (#49409) were purchased from Millipore Sigma (Eugene, OR, USA). All antibodies were affinity purified using the immunogen ligands. The specificity of most antibodies was tested by the siRNA-mediated knockdown of target proteins in the cells. The antibodies used have been extensively used in our laboratory as well as in other laboratories. The non-specific binding of fluorescently labeled secondary antibodies was tested by incubating cell monolayers with secondary antibodies without the primary antibodies.
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