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Bacterial genomic dna kit

Manufactured by Tiangen Biotech
Sourced in China

The Bacterial Genomic DNA Kit is a laboratory tool designed to efficiently extract and purify high-quality genomic DNA from bacterial samples. The kit utilizes a straightforward and reliable procedure to isolate DNA, making it suitable for a variety of downstream applications.

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3 protocols using bacterial genomic dna kit

1

Extracting MRSA Genomic DNA

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The cultures of MRSA with MUP, FA and/or RET resistance were incubated with lysostaphin (1 mg/mL) (Sangon Biotech, Shanghai, China) at 37 °C for 0.5 h. Then, the DNA was extracted according to the instructions of the bacterial genomic DNA kit (Tiangen Biotech, Beijing, China), and utilized as a template for PCR assays.
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2

Identification of Bacterial Strain JR48

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Strain JR48 was grown on solid nutrient agar (NA) or liquid nutrient broth (NB) medium at 28°C, and stored at -80°C in 30% (v/v) glycerol. To identify JR48, total genomic DNA was extracted using the Tiangen™ Bacterial Genomic DNA kit according to manufacturer’s instructions. Gyrase subunit B (gyrB) and 16S rRNA genes were amplified using universal primers (Table S1). PCR products were sequenced and the obtained sequences (Table S2) were searched on the GenBank database (NCBI) using Basic Local Alignment Search Tool (BLAST) to find the closest matches.
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3

Bacterial Genome DNA Extraction and Sequencing

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Total DNA was extracted using a bacterial genomic DNA kit (Tiangen, China) according to the manufacturer's instruction. Sequencing was performed at Yuanquanyike Co. Ltd., China, using an Illumina Hiseq2000, using the 35 bp paired-end approach according to standard Illumina protocols. Of the more than 230 million 35-bp-long reads generated for BBMN68m, 97.67% were successfully mapped to the BBMN68 (GenBank Accession No. NC_014656.1) complete genome sequence using Maq software (default parameters). This resulted in 100× genome coverage. Single nucleotide polymorphisms (SNPs) were then identified and filtered using the pileup command for the SNP filter [19] .
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