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Ni2 nta superflow cartridge

Manufactured by Qiagen
Sourced in United States

The Ni2+-NTA superflow cartridge is a chromatography-based product designed for the purification of proteins with a histidine-tag. It utilizes nickel-nitrilotriacetic acid (Ni2+-NTA) resin to selectively bind and capture histidine-tagged proteins. The cartridge provides a convenient and efficient way to separate and purify target proteins from complex samples.

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4 protocols using ni2 nta superflow cartridge

1

Synthesis of Ubiquitin Linkage Types

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Ubiquitin variants were concentrated to 4 mM. K48-linked diubiquitin was synthesized in 1 ml of 50 mM Tris–HCl, pH 8.0, 2 mM TCEP supplemented with 1× energy regeneration solution (BostonBiochem), 100 nM His6-Ube1 (BostonBiochem), 2.5 μM E2-25K (BostonBiochem), 1 mM ubiquitinG76C, and 1 mM ubiquitinK48R. K63-linked diubiquitin was synthesized in the same buffer supplemented with 1× energy regeneration solution, 100 nM His6-Ube1, 2.5 μM His6-UBE2N/Uev1a complex (BostonBiochem), 1 mM ubiquitinG76C, and 1 mM ubiquitinK63R. Reactions were incubated at 30°C for 16 h then flowed through a 1 ml Ni2+-NTA superflow cartridge (QIAGEN) to extract the His6-tagged E1/E2 enzymes. Unreacted ubiquitin and diubiquitin were then separated on a HiLoad 26/60 Superdex 75 pg (GE Healthcare) equilibrated in 20 mM Hepes, pH 7.5, 150 mM NaCl, and 2 mM TCEP.
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2

Purification and Analysis of COX Enzymes

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BamHI, HindIII and T4 DNA ligase were all purchased from Takara Biotechnology Co., Ltd. (Dalian, China). A Ni2+-NTA Superflow Cartridge was purchased from Qiagen (Valencia, CA, USA). PD-10 desalting columns were obtained from Amersham Pharmacia Biotech, Inc. (Piscataway, NJ, USA). Coomassie Brilliant Blue R-250 was obtained from Sigma-Aldrich; Merck KGaA (Darmstadt, Germany). Anti-COX-1 (sc-166573) and anti-COX-2 antibodies (sc-166475) were both purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA). Mouse anti-His monoclonal antibody (M0812-3) was purchased from Hangzhou HuaAn Biotechnology Co., Ltd. (Hangzhou, China). Horseradish peroxidase (HRP)-conjugated anti-mouse immunoglobulin G (IgG; SA00001-1) was purchased from Proteintech (Chicago, IL, USA). AA was purchased from Alfa Aesar (Ward Hill, MA, USA). All other chemicals and reagents used were of highest purity.
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3

Purification and Refolding of Recombinant COX-2 Protein

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The soluble inclusion body proteins were applied to a Ni2+-NTA Superflow Cartridge (Qiagen) equilibrated with binding buffer. The column was next washed sequentially with binding buffer D followed by washing buffer (8 M urea, 20 mM sodium phosphate, pH 7.4, 500 mM NaCl, 0.1 mM PMSF, 1 mM β-mercaptoethanol and 40 mM imidazole) and then eluted with elution buffer (8 M urea, 20 mM sodium phosphate, pH 7.4, 500 mM NaCl, 0.1 mM PMSF, 1 mM β-mercaptoethanol and 500 mM imidazole). The purification of denatured trCOX-2 was monitored by analyzing aliquots of the collected samples using 12% SDS-PAGE and then stained with Coomassie Brilliant Blue R-250. The desired eluted proteins were refolded as previously described (26 ). Briefly, the purified denatured trCOX-2 products were diluted 1:10 in refolding buffer E (42 mM Tris-HCl, pH 8.0, 62 mM HEPES, 2.5 mM DTT, 0.1 mM CaCl2, 0.5 M arginine) and slowly stirred on ice for 4 h to allow COX-2 renaturation to occur. The renatured trCOX-2 was stored at −80°C following determination of protein concentration using the Bradford assay.
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4

Structural Characterization of StoD

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StoD [1–101] with an N-terminal MGSSHHHHHHSSGLVPRGSH tag (Table S2) was expressed and purified as for autoubiquitination assays, except expression was induced for 16 h at 21°C and the His-tagged protein extracted using a 5 ml Ni2+-NTA superflow cartridge (QIAGEN). The eluate was directly applied to a HiLoad 16/60 Superdex 75 pg (GE Healthcare) column equilibrated in 20 mM Tris–HCl, pH 7.5, and 150 mM NaCl. The protein was concentrated in a centrifugal concentrator device (10 kD molecular mass cutoff membrane; Millipore) to 20 mg/ml. Selenomethionine (SeMet)-substituted StoD [1–101] was expressed in B834 (DE3) cells using SelenoMethionine Medium Complete (Molecular Dimensions) and then purified in the same way.
Protein was crystallised at 21°C by the vapour diffusion sitting-drop method with 400 nl drops using an OryxNano Crystallisation Robot (Douglas Instruments). Native crystals grew with 60% 0.9 M Na malonate, 0.5% Jeffamine, 0.1 M Hepes, pH 6.5, whereas SeMet crystals grew with 50% 0.9 M Na malonate, 0.5% Jeffamine, and Hepes, pH 6.9.
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