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Total eif2α

Manufactured by Cell Signaling Technology
Sourced in United States

Total eIF2α is a lab equipment product that measures the total amount of eIF2α (eukaryotic translation initiation factor 2 subunit alpha) in a sample. eIF2α is a key component of the eukaryotic protein synthesis machinery. This product provides a quantitative assessment of the total eIF2α levels in cells or tissues.

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39 protocols using total eif2α

1

Elucidating eIF2α-PHLPP Interaction

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Cells were harvested and detergent-solubilized cell lysates were obtained as described previously [5 (link), 7 (link), 8 (link), 17 (link)]. Equal amounts of cell lysates were resolved by SDS-PAGE and subjected to western blot analysis. To examine the interaction between eIF2α and PHLPP, the solubilized cell lysates were incubated with either the anti-HA high-affinity antibody or the anti-PHLPP1 or PHLPP2 antibodies and protein A/G agarose beads (Thermo) at 4 °C for overnight. The beads were washed three times with lysis buffer and the immunoprecipitated proteins were analyzed by SDS-PAGE and Western blotting. The phospho-eIF2α, total eIF2α, ATF4, and LC3 antibodies were obtained from Cell Signaling. The PHLPP1 and PHLPP2 antibodies were from Bethyl laboratories. The β-actin and the anti-HA high-affinity antibodies were from MilliporeSigma.
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2

Phosphorylated eIF2α analysis in Plasmodium

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Pf3D7 cultures were subjected to two rounds of tight synchronization within a span of 3 h in the previous cycle, followed by one additional synchronization in the subsequent cycle immediately after RBC invasion. After 3 h post-invasion, ring stage parasites were treated for 6 h with 250 μM MSO in RPMI-gln medium. For eIF2α phosphorylation analysis in PbWT and GSKO parasites, infected mouse blood of similar parasitemia predominantly containing the ring stages was incubated in vitro with 250 µM MSO for 6 h in RPMI-gln medium. The parasite pellets were then prepared by saponin treatment and lysed with 0.5x PBS containing 0.5% Triton X-100, Halt protease inhibitor and PhosSTOP (Roche, 4906845001). Western blot analysis was performed with phosphorylated eIF2α (#3398, Cell Signaling Technology) and total eIF2α (#9722, Cell Signaling Technology) antibodies.
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3

Protein Extraction and Western Blot Analysis

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Cells were lysed in buffer containing the following: 50 mmol/L TrisHCl pH 6.7, 150 mmol/L NaCl, 1% Triton X-100, cOmplete Protease Inhibitor Cocktail (Roche), Phosphatase Inhibitor Cocktail 2 (Sigma-Aldrich), and Phosphatase Inhibitor Cocktail 3 (Sigma-Aldrich). The following antibodies were used: anti-Wfs1 (11558–1-AP; Proteintech), phospho-PERK (3179; Cell Signaling), phospho-Eif2α (3398; Cell Signaling), total Eif2α (9722S; Cell Signaling), total PERK (3192S; Cell Signaling), GAPDH (G8795; Sigma-Aldrich), Spry2 (ab50317; Abcam), and Serca2 (sc-8095; Santa Cruz Biotechnology). Islet protein samples were isolated from the TRIzol Reagent organic phase after RNA isolation as described in the protocol, except the pellet was resuspended in 5 mol/L urea in 0.5% SDS.
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4

Comprehensive Antibody Panel for Protein Analysis

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The following commercial primary antibodies were used: G3BP1 (mouse monoclonal; BD Biosciences); TIAR (mouse monoclonal; BD Biosciences); NONO (rabbit polyclonal C-terminal; Sigma-Aldrich); SFPQ (rabbit monoclonal; ab177149, Abcam); CPSF6 (rabbit polyclonal; A301-356A, Bethyl); FUS (mouse monoclonal; 4H11, Santa Cruz); ELAVL1 (rabbit polyclonal, 11910-1-AP, Proteintech); PABPC1 (rabbit polyclonal, Cell Signaling, 4992); EIF4E (mouse monoclonal; BD Biosciences); UBAP2L (rabbit polyclonal; A300-533A, Bethyl); DAZAP1 (rabbit polyclonal; A303-984A, Bethyl); hnRNP K (rabbit polyclonal; A300-674A, Bethyl); PSPC1 (rabbit polyclonal N-terminal; Sigma-Aldrich); TDP-43 (rabbit polyclonal C-terminal; Sigma-Aldrich); HNRNPA3 (rabbit polyclonal; 25142-1-AP, Proteintech); RBM12B (rabbit polyclonal; 17137-1-AP, Proteintech); SRSF9 (rabbit polyclonal; 17926-1-AP, Proteintech); SMARCA5 (rabbit polyclonal; 13066-1-AP, Proteintech); MATR3 (rabbit polyclonal; 12202-2-AP, Proteintech); YBX1 (rabbit polyclonal; 20339-1-AP, Proteintech); GFP (mouse monoclonal; sc-9996, Santa Cruz); Flag (DYKDDDDK tag, mouse monoclonal; 9A3, Cell Signaling); eIF2α phosphorylated at Ser51 (rabbit monoclonal; ab32157, Abcam); total eIF2α (rabbit monoclonal; D7D3, Cell Signaling); and β-actin (mouse monoclonal; A5441, Sigma-Aldrich). Antibodies were used at 1:1,000 dilution for all applications unless stated otherwise.
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5

Quantitative Western Blot Analysis of Liver Proteins

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Frozen liver tissue from mice and human samples were homogenized in RIPA lysis buffer (Barnes et al., 2013 (link)) with protease and phosphatase inhibitors added and protein concentrations were assayed using the DC Protein Assay (BioRad, Hercules, CA). Liver lysates were then separated on 12% polyacrylamide gels and used for western blot analysis with antibodies against CHOP (#5554), phosphoSer51 eIF2α (#3597), total eIF2α (#9722) (Cell Signaling, Danvers, MA); MIF (#TP234) (Torrey Pines Biolabs, Inc, Secaucus, NJ), PDI (#610946), GRP78 (#610978) (BD Biosciences, San Jose, CA). HSC70 (sc-7298) (Santa Cruz Biotechnology, Dallas, TX), β-actin (#4967), (Cell Signaling) and GAPDH (MAB374) (Millipore Sigma, St. Louis, MO) were used as loading controls. Signal intensities were quantified using Eastman Kodak Co. Image Station 4000R.
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6

Western Blot Analysis of Protein Expression

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Protein samples were denatured by boiling in SDS sample buffer containing 10% β-mercaptoethanol and then subjected to 10% SDS-PAGE. Blots were transferred onto a nitrocellulose membrane and blocked with Blotting Grade Blocker (#170-6404, Bio-Rad, Hercules, CA, USA). Proteins were transferred to a nitrocellulose membrane, then immunoblotted with appropriate primary antibodies. Membranes were incubated overnight with the following primary antibodies: p-eIF2α (1:1000; #3398, Cell Signaling, Danvers, MA, USA); total eIF2α (1:1000; #2103, Cell Signaling); Tubulin (1:40 000; #SAB4500087, Sigma-Aldrich) Puromycin (1:10 000; #MABE342, Millipore, Burlington, MA, USA); and ß-actin (1:12 000; #sc1616, Santa Cruz Biotechnology, Dallas, TX, USA) in 5% BSA in TBST at 4°C and subsequently washed thrice for 5 min with TBST. Incubation with the HRP-conjugated secondary antibodies goat anti-rabbit, goat anti-mouse or rabbit anti-goat (1:10 000; Jackson Immunoresearch, West Grove, PA, USA) was done for 1 h at room temperature. Immunodetection was carried out with EZ-ECL kit (#20500120, Biological Industries, Beit Haemek, Israel), acquired with Chemi XRS Gel Doc (Bio-Rad), and quantified using the Quantity One software (Bio-Rad). Intensity was normalized to background signal.
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7

Cellular Protein Extraction and Analysis

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Cellular protein extraction, 4–15% gradient SDS-PAGE gel electrophoresis (Bio-Rad laboratories), transfer to PVDF membrane, and immunoblot development were performed as published recently.3 , 33 (link) The following rabbit anti-human antibodies were used (obtained from Cell Signaling): cleaved PARP-1 (5625), p-eIF2α (3398), total eIF2α (5324), SQSTM1 (8025), LAMP1 (9091), LC3-I/II (12741), cytochrome c (11940), ATF-4 (11815), and XBP-1s (40435). Equal protein loading was examined by β-actin detection using a mouse monoclonal antibody (Sigma Aldrich); secondary antibodies: HRP-conjugated goat anti-rabbit or goat anti-mouse (Jackson ImmunoResearch Laboratories). Densitometric image analysis was performed using Image Studio Lite quantification software (LI-COR Biosciences). For cytochrome c immunodetection, cell fractionation (mitochondrial versus cytosolic) was performed using the Mitochondria/Cytosol fractionation kit (ab65320, Abcam). Purity of fractions was confirmed according to kit instructions.
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8

Western Blot Analysis of Cellular Proteins

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Equal amounts of protein lysates were separated by SDS-PAGE, and immunoblot analyses were carried out for three independent experiments using horseradish peroxidase–tagged secondary antibody. Primary antibodies used for immunoblots included total eIF2α (Cell Signaling Technology, #9722), eIF2α-P (Cell Signaling Technology, #9721), custom affinity-purified ATF4 antibody [26 (link)], CAT1 (Abcam, ab37588), GAPDH (Abcam, ab9485), puromycin (EDM Millipore, #17H1), and p70 S6 Kinase (49D7) rabbit mAb (Cell Signaling Technology #2708). Blots were incubated with Pierce ECL Western Blotting Substrate prior to imaging on FluorChem M- Multiplex fluorescence (Protein Simple).
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9

Western Blot Analysis of Protein Regulation

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Cell lysates were harvested in 2% sodium dodecyl sulfate (SDS) and equal amounts of lysates were separated on a 10% SDS-polyacrylamide gel (except for Fig 7, where a 15% SDS-polyacrylamide gel was used) and transferred to polyvinylide difluoride (PVDF) membranes. Proteins were detected using the Western-Star chemiluminescent detection system (Applied Biosystems) with the following primary antibodies: PKR D7F7 (#12297, Cell Signaling Technology), P-PKR E120 (ab32036, abcam), Penta-His (34660, Qiagen), K3L (a gift from J. Tartaglia [37 (link)]), P-eIF2α (#3597, Cell Signaling), total eIF2α (#2103, Cell Signaling), and Actin (A2066, Sigma).
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10

Immunoblot Analysis of Cellular Signaling

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Immunoblot analysis was performed following our published standard procedures. The following primary antibodies were used: CYP1A1 (sc-20772, Santa Cruz Biotechnology), total p38 (#9212, Cell Signaling, Danvers, MA), phospho-p38 (#9211, Cell Signaling), total eIF2α (#9722, Cell Signaling), phospho-eIF2α (#9721, Cell Signaling), HO-1 (#5853, Cell Signaling). Use of HRP-conjugated goat anti-rabbit (111-035-144) or goat anti-mouse secondary antibody (115-035-146, Jackson Immunological Research) was followed by visualization using enhanced chemiluminescence detection reagents.
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