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Epics xl mcl flow cytometer

Manufactured by Beckman Coulter
Sourced in United States, Canada, Finland

The Epics XL-MCL flow cytometer is a laboratory instrument designed for cell analysis. It uses laser-based technology to measure and analyze the physical and chemical characteristics of cells or other particles suspended in a fluid stream. The core function of the Epics XL-MCL is to provide rapid quantitative measurements of multiple parameters on individual cells or particles.

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82 protocols using epics xl mcl flow cytometer

1

Analyzing Cell Cycle and Apoptosis

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Cells (4× 10 5 ) were cultured for 24 h in medium alone or with varying concentrations of inhibitor.
Cells were harvested and prepared in hypotonic fluorochrome solution (0.1% sodium citrate; 0.1% Triton X-100; 50μg/ml propidium iodide; 100ug/ml RNase A in dH2O). Cell cycle status was analyzed using a Beckman Coulter EPICS-XL MCL TM flow cytometer and data were analyzed using EXPO32 TM software.
Apoptotic populations were examined using FITC annexinV/PI (Annexin V-FITC Apoptosis Detection Kit I, BD Biosciences, cat: 556547) staining after cells were cultured in medium only or with varying concentrations of inhibitors according to the protocols (BD Bioscience). The annexin V/PI-positive apoptotic cells were enumerated using a Beckman Coulter EPICS-XL MCL TM flow cytometer.
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2

Cell Cycle and Apoptosis Assay

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The cells were incubated with different concentrations of 1 (0, 2.5, 5, and 10 μM) for 72 h, then trypsinized, collected the cells, and washed with PBS. In order to analyze the cell cycle arrest, the cells were fixed with 70% ethanol at 4 °C overnight. The fixed cells were washed with PBS and stained with malonimide (PI) for 5 min in the dark, and then analyzed and collected for cell cycle using Epics XL-MCL flow cytometer (Beckman Coulter, Miami, FL, USA). Data were processed using ModiFit. In order to analyze cell apoptosis, perform cell apoptosis analysis according to the protocol in the BD Pharmingen FITC Annexin-V Apoptosis Detection Kit. Add Annexin-V FITC and propidiumiodide (PI) to the 1X bingding butter cell suspension. Stain for 10 min in the dark. Then, the Epics XL-MCL flow cytometer (Beckman Coulter, Miami, FL, USA) was used to collect data and perform apoptosis analysis.
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3

Flow Cytometric Minimal Residual Disease Assay

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Minimal residual disease (MRD) test was used to predict the treatment efficacy and the relapse risk. MRD was monitored at the end of the induction of remission phase (day 43–46) using EPICS XL-MCL flow cytometer and reagent systems (Coulter, Hialeah). Surface staining fluorescent labelled monoclonal antibodies against T or B antigens and isotypic controls were provided by Becton Dickenson (Mountain View, California). Intracellular staining was done using INTA Prep permeabilization reagent from the Beckman Coulter where cells were fixed with reagent 1 (containing formaldehyde). After washing, permeability was induced with reagent 2 (containing saponin) and the rest of the RBCs were lysed. Monoclonal antibodies used for 4 color combinations for the detection of MRD were as follows.

BCP-ALL: TdT/CD10/CD19/CD 45; CD10/CD20/CD19/CD 45; CD34/CD38/CD19/CD 45; CD34/CD22/CD19/CD 45; CD19/CD34/CD45; CD10/CD20/CD22/CD 45.

T cell-ALL: TdT/CD1/cyt CD3; TdT/cyt CD3/CD7; CD4/CD8/CD3/CD45.

A minimum of 3 × 105 ungated events were collected and examined. The ability to spot 30 clustered MRD events in 3 × 105 total cellular events (0.01 %) is designated as minimum target sensitivity for quantifying MRD, i.e. cut off point for MRD positive test was 0.01 %.
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4

Induction of Antigen-Specific T Cells

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OCV-501-specific Th1 cells and WT1-killer peptide-specific CTLs were induced by 14 days of co-culture of human PBMC from healthy donors with both HLA class I (A*02:01 or A*24:02) and one or more of the HLA class II types (DRB1*04:05/15:01/15:02 and DPB1*09:01/05:01) with medium containing 20 μg/mL of OCV-501 and either 20 μg/mL of WT1-killer peptide WT1-126 [16 (link)] (RMFPNAPYL, purity ≥98%, Otsuka Pharmaceutical Co., Ltd.) or WT1-235mu [25 (link)] (CYTWNQMNL, purity ≧94%, Otsuka Pharmaceutical Co., Ltd.). The cultured T cells were then plated and cultured with/without OCV-501 in the presence of WT1-killer peptide-pulsed APC (day 0). The number of WT1-killer peptide-specific CTLs was measured by tetramer assay. Briefly, harvested cells (day 0 or day 5) and PE-conjugated tetramer; WT1A*0201 tetramer (for detection of WT1-126-specific CTL), WT1 (mutant) A*2402 tetramer (for detection of WT1-235mu-specific CTL), A*0201 negative tetramer or A*2402 negative tetramer (Medical & Biological Laboratories Co., Ltd., Nagoya, Japan), were mixed vigorously and incubated for 30 min. FITC-conjugated anti-human CD45 Ab (Beckman Coulter Inc., Brea, US) and PC5-conjugated anti-human CD8 Ab (0.5 μL) were added, mixed vigorously and incubated for 15 min. Cells were re-suspended and counted by Coulter EPICS-XL MCL Flow Cytometer.
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5

Serological Profiling of Malaria Trophozoites

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Trophozoite/schizont infected RBCs (iRBCs) obtained after gel floatation and fixation were incubated with 1 : 200 diluted autologous plasma in FACS staining buffer (FSB) for 45 minutes at room temperature. Samples were washed twice with FSB and incubated with fluorescein-conjugated antihuman IgG (Sigma, UK) and 2 μg/mL ethidium bromide at room temperature for 30 minutes. Samples were then washed twice with FBS. Coulter EPICS XL-MCL flow cytometer was used for acquirement and analysis of 10000 events/sample. Populations of parasitized erythrocytes expressing antiserum-reactive VSA (EtdBr- and plasma antibodies-positive) were gated. The mean fluorescence intensities (MFI) were determined for symptomatic and asymptomatic groups.
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6

Quantification of mCD44v6 and MTA1 Expression

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Tissue samples wetted with 1 ml 1X PBS were mechanically disaggregated by placing them into a Medicon (BD Biosciences) and inserted in the Medimachine (BD Biosciences) for 45 sec at 100 rpm. Cell suspensions were filtered using a Filcon (BD Biosciences), washed twice with 1X PBS and divided at a concentration of approximately 1×107 cells/ml into aliquots for staining. For detection of mCD44v6 positive cells, cell aliquots were incubated with CD44v6 (Bio-Rad MCA1730, dilution 1:500) for 1 h at room temperature (RT) in an orbital shaker at low speed. Cells were then washed and the percentage of cells expressing mCD44v6 was detected following a 60 min incubation with a goat anti-mouse IgG1: FITC secondary antibody (Bio-Rad STAR132F; dilution 1:100).
For intracellular labelling, cells fixation-permeabilization was performed using 1% paraformaldeyde-1% saponin in 1X PBS for 20 min at 4°C before cells were incubated with MTA1 antibody (SantaCruz Biotechnology SC-17773 dilution 1:500) and stained with a Polyclonal Goat anti-mouse-RPE Goat F(ab)2 secondary antibody (Dako R0480, dilution 1:100). Unstained cells were processed in parallel and included as references during analysis as well as cells stained only with the secondary antibodies. Flow cytometry analysis was performed using a Coulter Epics XL-MCL Flow Cytometer and its integrated SYSTEM II™ Software.
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7

Pressure-induced Erythrocyte Morphology

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To examine morphological changes of erythrocytes by pressure, reserved erythrocytes at a 10% hematocrit in PBS were incubated for 0 and 24 h at 37°C and exposed to a pressure of 200 MPa for 30 min at 37°C [17 (link)]. After the decompression up to 0.1 MPa (atmospheric pressure), the suspensions were used as samples of a light microscope (model IX-71, Olympus).
Pressure-induced hemolysis was performed as previously described [17 (link),22 (link)]. Briefly, the erythrocytes (or red ghosts) suspended at a 0.3% (or 0.6% for red ghosts) hematocrit in PBS were exposed to a pressure of 200 MPa for 30 min at 37°C. After the decompression, the erythrocyte suspensions were centrifuged for 1 min at 3,000×g and room temperature. The absorbance of the supernatants was measured at 542 nm. The particles produced from erythrocytes by high pressure were analyzed using an EPICS XL-MCL flow cytometer (Coulter, USA) [21 (link),22 (link)].
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8

Multicolor Flow Cytometry of Lymphocytes

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Single- and dual-color immunophenotyping of lymphocytes was performed at 48hr as described in our previous studies16 (link),29 (link) with modifications for intracellular staining. Gating strategies included forward and side scatter, single parameter histograms, two-parameter density plots, and back-gating to confirm gating strategies. Antibodies (Abs) used included mouse anti-human monoclonal antibodies (mAbs) (of the IgG1 isotype): fluorescein isothiocyanate (FITC)-conjugated CD3, CD14, CD45RO, CD45RA, CD154, CCR7, IL-2, IL-4, IFN-gamma; phycoerythrin (PE)-conjugated CD8 and CD4-perCP; and the following Simultest (FITC/PE-conjugated) reagents: CD4/CD8, CD3/CD19. All mAbs were purchased from BD Biosciences (San Diego, CA) or R&D Systems (Minneapolis, MN), and titrated to obtain maximum staining efficiency according to manufacturer’s recommendation. Flow cytometric analysis was performed on a Coulter Epics XL/MCL Flow Cytometer using System II software (Coulter, Miami, FL) and CytoComp (Coulter). The total numbers of lymphocytes were calculated from the white blood cell (WBC) count (total lymphocytes/mm3 or percentage total lymphocytes).
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9

Quantification of HIV-1 and HCV Biomarkers

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HIV-1 viral load was determined using an in vitro nucleic acid amplification test (AMPLICOR HIV-1 Monitor Test, Roche Diagnostics, Branchburg, NJ) with ultrasensitive methods (range 50–750,000 HIV-1 RNA copies/ml) and repeated with standard methods, if viral load met the upper detection limit (range 400–10 million copies/ml). Lymphocyte subset counts, including T-helper cells (CD3+CD4+), were derived using the mean of two serially collected peripheral blood samples analyzed with flow cytometry (Epics XL-MCL flow cytometer, Coulter, Hialeah, FL). HCV antibodies were assessed using EIA (Ortho-Diagnostics, Raritan, NJ; specificity 99.5%) and positive assays (i.e., signal to cutoff ratios < 8.0) were confirmed using immunoblot analysis (CHIRON RIBA HCV v3.0 SIA method, Ortho-Diagnostics, Raritan, NJ).
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10

Flow Cytometric Lymphocyte Profiling

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Lymphocyte subpopulations were characterized by flow cytometry using monoclonal antibodies against the following antigens: CD21+ (CA2.1D6, Serotec, B cells, Serotec, Kidlington, UK), CD4+ (CVS4, Serotec, T-helper, Serotec, Kidlington, UK), CD8+ (CVS8, Serotec, Tcytotoxic/suppressor, Serotec, Kidlington, UK). For surface staining, 100 μL of whole blood were incubated with monoclonal antibodies at the appropriate dilution for 30 min at 4 °C. After two washes with phosphate-buffered saline (PBS), cells were incubated with 10 μL of 1:5 diluted fluorescein isothiocyanate (FITC)-labeled goat anti mouse immunoglobulin F (ab') 2 fragment (SouthernBiotech, Birmingham, USA) for 30 min at 4 °C. Negative controls consisted of cells incubated with fluoresceinated goat anti mouse antibody alone. Two milliliters of lysing solution (ammonium chloride) were added and left for 20 min at room temperature. Cells were then washed twice and resuspended in 0.5 mL of PBS.
A minimum of 10000 events from a gated lymphocyte population was acquired and analyzed on a Epics XL-MCL flow cytometer (Coulter, cCoulter® Epics® XL-MCLTM Miami, USA), thus obtaining percentages of the different subpopulations. Absolute lymphocyte subset counts were calculated as the product of the lymphocyte absolute count and the lymphocyte subset percentage.
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