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59 protocols using cx21 microscope

1

Retroperitoneal and Ovarian Tissue Histology

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Retroperitoneal fats were fixed for 48 h in formalin-alcohol, inserted in paraffin, cut into 3-μm thick specimens and finally hematoxylin and eosin (HE) staining was done. Sections were examined by a CX21 microscope (Olympus, Tokyo, Japan) and images were captured at 20 magnification. Adipocyte space diameters were measured in two different microscopic fields and the average was then calculated.
Furthermore, samples were collected from ovarian tissues and fixation was done in 10% paraformaldehyde for 1 day. After that, sections were dipped in water followed by serial dilutions of alcohol. Sections were then inserted in paraffin wax and were sectioned at 4-μ. The cut tissue specimens were stained by HE or Masson's trichrome and inspected by a light microscope (39 ) to detect pathological changes. A calibrated digital microscope camera (Tucsen ISH1000, Yuscen Photonics Co. Ltd., China) using Olympus® CX21 microscope, with resolution of 10 megapixels (3,656 × 2,740 pixel for every image). All Masson's trichrome stained sections were captured at original magnification 400x (Objective 40x), UIS optical system (Universal Infinity System, Olympus, Tokyo, Japan).
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2

Comprehensive histological analysis of tumors

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HE, TUNEL and immunohistochemical (IHC) staining were carried out as reported by us previously [39 (link)]. HE staining was used to detect the pathological changes. Apoptotic cells in tumor tissues were stained with a TUNEL Apoptosis Detection Kit (Beyotime) according to the manufacturer’s protocol. For histological analysis, tumors were fixed overnight in 10% neutral buffered formalin, embedded in paraffin and sectioned at 5-μm thickness using a Leica RM2265 microtome. IHC staining was carried out with an EnVision Detection System HRP. A rabbit/mouse (DAB+) kit (Agilent) was used following the manufacturer’s instructions. Endogenous peroxidase was blocked by incubation with 0.3% hydrogen peroxide for 15 min. Antigen retrieval was performed by boiling the slides in citrate buffer (10 mM, pH 6.0) in a water bath for 20 min. After being rinsed and blocked with 5% bovine serum albumin (BSA), the slides were incubated overnight at 4 °C with primary antibodies, followed by 1 h with labeled Polymer-HRP at room temperature. Subsequently, the slides were exposed to DAB+ Chromogen. Counterstaining with hematoxylin was carried out. After mounting, the slides were observed under an Olympus CX21 microscope, scanned with a high-resolution digital slide scanner (Pannoramic 250, 3DHistech), and quantified by ImageJ software.
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3

Immunohistochemical Profiling of DNA Damage Repair in Tumors

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H&E and IHC staining were performed as previously reported46 (link) with a small modification. H&E staining was used to detect pathological changes. For histological analysis, formalin-fixed, paraffin-embedded tumors were sectioned, and slides were deparaffinized using xylenes (Thermo Fisher Scientific Inc.). Endogenous peroxidases were quenched with 3% hydrogen peroxide in methanol. Staining was performed using antibodies against BRCA1 (1: 100), BRCA2 (1: 100), RAD51 (1: 50), γ-H2AX (1: 50), P-gp (1: 200), BCRP (1: 200), PAR (1: 250), or Ki67 (1: 500). Counterstaining was performed using Mayer’s hematoxylin (Dako, Glostrup, Denmark). Images were observed under an Olympus Cx21 microscope, scanned with a high-resolution digital slide scanner (Pannoramic 250, 3DHistech), and quantified using ImageJ software.
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4

Immunohistochemical Evaluation of GLUT-1 Expression

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The immunohistochemical evaluation was done by three observers who were blinded to their respective histopathologic grades. Samples were considered positive for the expression of GLUT-1 if cells showed brown staining on the cell membrane, cytoplasm, or nucleus. Scoring of GLUT-1 expression was evaluated by three independent observers. Five representative areas of the epithelium at the invasive front were evaluated with an Olympus CX-21 microscope under ×400. Following scores were used to categorize the specimen: 0 (0% of positive cells), 1 (1%–25% of positive cells), 2 (25%–50% of positive cells), and 3 (>50% of positive cells). The intensity of staining was scored 0 (no expression), 1 (mild expression, i.e., less than the intensity expressed by the internal control, endothelial cells); 2 (intense expression, i.e., if similar to that of endothelial cells expression). The location of staining was scored 0 for no staining, 1 for expression in membrane only, 2 for cytoplasmic positivity, and 3 for expression both in membrane and cytoplasm.
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5

Histological Analysis of Mouse Ovaries

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Ovaries of each mouse got fixed with 4% formaldehyde, dehydrated in ethanol, embedded with paraffin, and sliced into 4 µm sections. Subsequently, the sections were stained with the adoption of commercial H&E kits (Solarbio, Beijing, China). Under an Olympus CX21 microscope (Olympus, Japan), the images of ovaries were visualized [20 (link)].
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6

Urinary Crystal Analysis in Animals

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For all animals at 3, 6, 9 and 12 weeks after the start of the study, microscopic analysis of the first portion of urine collected when animals were placed in a metabolic cage for a period of 24 h were performed. Microscopic assessment of inorganic sediment and differential count of urine crystals (phosphate and oxalate crystals) were performed. For this purpose, urine samples of 0.5 ml were centrifuged for 15 s at 3,000 rpm on a MiniSpin centrifuge (Eppendorf) and the sediment was analyzed on an Olympus CX 21 microscope at magnification ×10. Photomicrographs were taken of each urine sample. The micrographs were used to estimate the number of crystals.
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7

Caspase-3 Expression in Formalin-Fixed Liver

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Formalin liver samples were embedded in paraffin. The paraffin blocks were cut into 5–7 μm thickness. Deparaffinization and antigen recovery were carried out. Endogenous peroxidase activity was blocked by incubation for 5 min with 3% H2O2. Sections were incubated with the primary antibody for caspase-3 overnight at 4°C. Detection kit was used for visualization of the antibody reaction to detect and counting the number of apoptotic cells. The visualization performed according to the manufacturer instructions (Sigma, St. Louis, MO). Revelation done using 3’, 3-diaminobenzidine tetrahydrochloride (Sigma, St. Louis, MO). Sections washed in distilled water, and counter stained with Mayer's Hematoxylin for 5 min then examined using Olympus CX 21 microscope under 400 × powers.
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8

Detailed Insect Imaging Protocol

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Material used in this study is deposited in the Insect Collection of Shanghai Normal University, Shanghai, China (SNUC).
Habitus photos were taken using a Canon EOS 7D camera mounted with an MP-E 65 mm Macro Photo Lens. Photos of dissected parts were taken using a Canon G9 camera mounted on an Olympus CX21 microscope, and combined by the automontage software Zerene Stacker.
Total length was measured from the anterior margin of the head to the posterior margin of the abdominal tenth tergite; forebody length, from the anterior margin of the head to the posterior margin of the elytra; pronotum length, length of the pronotum along the midline; elytra length, length of the elytra along the suture; head width, width of the head across the eyes; pronotum width, maximum width of the pronotum.
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9

Intestinal Morphometry in Avian Models

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At 6,18 and 28 days of the experiment, The birds were euthanized using cervical dislocation following the mechanical cervical dislocation method [26 ]. Subsequently, the abdomen of each carcass was opened, and five-cm long segments were extracted from the jejunum, these segments were then rinsed with normal saline and immersed in formalin. After tying them with threads from both sides, they were placed in 10% buffered formalin for fixation to calculate crypt depth and villus height to crypt depth ratio [27 (link)]. Morphometric analyses of the intestinal epithelium were conducted using TS view software and ImageJ software with a standard calibrated stage micrometer and a calibrated standard digital microscope camera (Tucsen digital camera) mounted on an Olympus CX21 microscope, featuring a resolution of 5 MP (2592 × 1944 pixels per image). All slides were captured at a Power Field of 100x, utilizing the UIS optical system (Universal Infinity System). WS [28 ] was employed to determine villus height (VH, µm), measured from the top of the villus to the top of the lamina propria. Crypt depth (CD, µm) was defined as the depth of the invagination between the adjacent villi [29 (link)].
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10

Quantitative Single-Cell Fluorescence Imaging

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In order to obtain a comprehensive data set of each culture the fluorescence of at least 500–1000 cells was monitored. For this 1 ml of the cultures from the different cultivation systems was transferred to a 1.5 ml reaction tube (OD750nm 1–2) and left with the cap open until microscopy. 30 μl of the cell suspension were transferred on a glass slide and the sample covered with a 24 mm × 24 mm cover glass. The suspension was fixed between the two glasses by light pressure to avoid movement of the cells but without destroying them. The edges of the covers were sealed using nail polish to avoid dry-out of the sample.
For microscopy the automated Olympus CX21 microscope with a 40× Plan Achromat objective was used. For each sample fluorescence images of 20 different positions that were predefined in the automated scanning tool of the Olympus Cell software, were recorded with an exposure time of 800 ms for every sample.
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