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10 protocols using spherisorb s3 ods 2 c18

1

HPLC-DAD-ESI/MSn Profiling of Phenolic Compounds

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The obtained extracts were re-dissolved in 20% aqueous ethanol at 10 mg/mL, filtered through a 0.22 µm nylon syringe filter, and analyzed by HPLC-DAD-ESI/MSn in a Dionex Ultimate 3000 UPLC system (Thermo Scientific, San Jose, CA, USA). The equipment consisted of a diode array detector coupled to an electrospray ionization mass detector, a quaternary pump, an auto-sampler (kept at 5 °C), a degasser, and an automated thermostated column section (kept at 35 °C). A Waters Spherisorb S3 ODS-2 C18 (3 µm, 4.6 mm × 150 mm, Waters, Milford, MA, USA) column was used. Data were collected simultaneously with DAD and in negative mode detection on a Linear Ion Trap LTQXL mass spectrometer (Thermo Scientific, San Jose, CA, USA), following a previously described procedure [22 (link)]. An Xcalibur® data system (Thermo Scientific, San Jose, CA, USA) was used in data acquisition. Phenolic compounds were identified by comparing their retention times and UV–Vis and mass spectra with standards, when available. Otherwise, compounds were identified tentatively by comparing data obtained from available information published in the literature. For quantitative analysis, calibration curves obtained from available standards or closely related standards were used. The results were expressed as mg/g of extract.
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2

Profiling Phenolic Compounds in Botanical Extracts

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The phenolic profile was evaluated (Dionex Ultimate 3000 UPLC, Thermo Scientific, San Jose, CA, USA) after redissolving each lyophilized extract in ethanol/water (80:20; v/v) to a final concentration of 10 mg/mL (for decoctions and hydromethanolic extracts) or 20 mg/mL (for hydroethanolic and ethanolic extracts). A DAD detector (280 and 370 nm as the preferred wavelengths) coupled to an electrospray ionization mass detector (LC-DAD-ESI/MSn) was used. The selected column was a Waters Spherisorb S3 ODS-2 C18 (3 µm, 4.6 × 150 mm, Waters, Milford, MA, USA) functioning at 35 ℃. Compounds were eluted with a gradient mixture of 0.1% formic acid in water and acetonitrile. MS analysis was performed in negative mode (Linear Ion Trap LTQ XL mass spectrometer, ThermoFinnigan, San Jose, CA, USA) using an electrospray ionization source (ESI). Phenolic compounds were identified based on their chromatographic behavior, spectra, and UV–Vis mass, either by comparison with authentic standards or available data from similar studies using the Xcalibur® software (ThermoFinnigan, San Jose, CA, USA). Each compound concentration (mg/g of lyophilized extract) was quantified through calibration curves drawn from the UV signal of the corresponding (or most similar) standard compound [22 (link)].
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3

UPLC-DAD-MS Analysis of Phenolic Compounds

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All the chromatographic information was obtained using a Dionex Ultimate 3000 UPLC (Thermo Scientific, San Jose, CA, USA), coupled to a diode array detector (280, 330, and 370 nm) and an electrospray ionization mass detector (Linear Ion Trap LTQ XL, Thermo Finnigan, San Jose, CA, USA), working in the negative mode. The chromatographic separation was performed using a Waters Spherisorb S3 ODS-2 C18 (4.6 × 150 mm, 3 μm, Waters, Milford, MA, USA) column at 35 °C. The compounds were identified considering the retention time, UV-Vis, and mass spectra in comparison with available standards. For quantitative analysis, calibration curves were obtained using injecting standard solutions with known concentrations (2.5–100 μg/mL): chlorogenic acid (y = 168823x − 161172), quercetin-3-O-rutinoside (y = 13343x + 76751) and p-coumaric (y = 301950x + 6966.7), based on UV-Vis signals and using the maximum absorption wavelength of each standard compound. In the case of unavailable commercial standards, the compounds were quantified via a calibration curve of the most similar standard available. The results were expressed as mg/g of extract [12 (link)].
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4

Phenolic Compound Quantification in Plant Extracts

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Before chromatographic analysis, the samples of the solutions containing the extracts were diluted with water and filtered through 0.2 µm disposable liquid chromatography (LC) filter disks (30 mm, regenerated cellulose; Whatman, Maidstone, UK). The samples were analyzed using a Shimadzu 20A series UFLC (Ultra-Fast Liquid Chromatograph, Shimadzu Corporation, Kyoto, Japan) with a quaternary pump and a photodiode array detector (PDA) coupled to an LC solution software data-processing station. A Waters Spherisorb S3 ODS-2 C18, (3 μm, 4.6 mm × 150 mm; Waters Associates, PA, USA) column was used, operating at 35 °C. The chromatographic method was previously described by the authors [43 (link)]. A diode array detector (DAD) was used at 280 and 370 nm wavelengths. The target phenolic compounds were identified according to their UV spectra and retention time [55 (link)]. For the quantitative analysis, a baseline to valley integration with baseline projection mode was used to calculate peak areas, and external standards were used for quantification. The results were expressed in mg per g of dry plant (mg/g dry plant).
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5

Walnut Green Husk Phytochemical Profiling

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The dry extract was re-suspended at 10 mg/mL using aqueous ethanol (80% ethanol, v/v) and filtered through a 0.2 μm disposable LC filter disk (30 mm, nylon). The phytochemical characterization of walnut green husks was traced by liquid chromatography with diodearray detection (280, 330 and 370 nm wavelengths) coupled to electrospray mass ionization operating in negative mode (Dionex Ultimate 3000 UPLC and Linear Ion Trap LTQ XL, Thermo Scientific, San Jose, CA, USA) by using a Waters Spherisorb S3 ODS-2 C 18 (3 μm, 4.6 mm × 150 mm), as previously described by the authors (Bessada et al., 2016) . The compounds were identified according to their retention time, UV-vis and mass spectra by comparison with those obtained using standard compounds, as well as with literature data. Calibration curves of appropriate standards (p-coumaric acid, α-tetralone, juglone and quercetin-3-O-glucoside, HPLC grade, Sigma-Aldrich) were obtained in the range between 200 and 5 μg/mL, for the quantitative analysis. The results were expressed as milligrams of each compound per gram of extract (mg/g). Triplicates were analysed with two independent injections.
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6

UPLC-MS Analysis of Chemical Compounds

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The chromatographic data was acquired using a Dionex Ultimate 3000 UPLC (Thermo Scientific, San Jose, CA, USA) coupled to a diode array detector (280, 330, and 370 nm) and an electrospray ionization mass detector (Linear Ion Trap LTQ XL, Thermo Finnigan, San Jose, CA, USA), working in negative mode. The chromatographic separation was performed using a Waters Spherisorb S3 ODS-2 C18 (3 μm, 4.6 mm × 150 mm, Waters, Milford, MA, USA) column at 35 °C. The compounds were identified considering the retention time, UV-Vis, and mass spectra in comparison with available standards and with literature data. For the fractional factorial design, Pareto and analysis of variance (ANOVA) was carried out to determine the principal effects and their magnitudes, while, for the general factorial designs, comparison of different samples was carried out through the application of one-way analysis of variance (ANOVA) using an F-test with p-value = 0.05, along with the least significant difference (LSD) Fischer's test. Both analyses were performed using Statgraphics Centurion XVI software (StatPoint Technologies, Inc. Warrenton, VA, USA).
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7

Phenolic Compounds Analysis in Hydromethanolic Extracts

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The phenolic compounds were determined in the hydromethanolic extract solution (5 mg/ml) by LC-DAD-ESI/MSn (Dionex Ultimate 3000 UPLC, Thermo Scientific, San Jose, CA, USA), following a procedure previously described by the authors (Bessada, Barreira, Barros, Ferreira, & Oliveira, 2016) (link). Chromatographic separation was performed using a Waters Spherisorb S3 ODS-2 C18 (3 µm, 4.6 × 150 mm). For the double online detection, a DAD (280, 330 and 370 nm as preferred wavelengths) and a mass spectrometer performed in negative mode (Linear Ion Trap LTQ XL mass spectrometer equipped with an ESI source, ThermoFinnigan, San Jose, CA, USA) were used and connected to the HPLC system. The identification was performed using standard compounds, when available, by comparing their retention times, UV-vis and mass spectra. If no standard compound was available, phenolic compounds were identified by comparing the obtained information with available data reported in the literature, giving a tentative identification. Quantification was made from the areas of the peaks recorded at 280 nm by comparison with calibration curves obtained from standards. The results were expressed as mg/100 g dry weight (dw).
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8

Optimized UFLC Analysis of Catechin

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The samples obtained during the extraction optimization studies were analysed using a Shimadzu 20A series UFLC (Shimadzu Corporation, Kyoto, Japan) with a quaternary pump and a photodiode array detector (PDA) coupled to an LC solution software data-processing station. Separation was achieved using a Waters Spherisorb S3 ODS-2C 18 , (3 m, 4.6 mm × 150 mm) column operating at 35 • C. The used mobile phase was a mixture of formic acid in water 0.1% (A) and100% of acetonitrile (B), and the established elution gradient was as follows: 15% B for 5 min, 15% B to 20% B over 5 min, 20-25% B over 10 min, 25-35% B over 10 min, 35-50% B for 10 min, and column re-equilibration (15 min), using a flow rate of 0.5 mL/min. Detection was carried out in the PDA at 280 nm as preferred wavelength. Catechin was identified by comparing its UV spectra and retention times with the ones of a commercial standard as reported previously (Guimarães et al., 2013) . The quantitative analysis was performed using a calibration curve based on catechin (y = 66243x-343411; R 2 = 0.999). Results were expressed in mg of catechin per g of dry fruit weight (mg/g dw).
2.6. Response surface methodology
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9

HPLC-DAD-ESI/MS Analysis of Betacyanins

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For betacyanins' determination an HPLC-DAD-ESI/MS analyses was performed with a Dionex Ultimate 3000 UPLC instrument (Thermo Scientific, San Jose, CA, USA) coupled with a diode-array detector and a mass spectrometer, as previously described by (Roriz, Barros, Prieto, Morales, et al., 2017) . The separation was carried out in a Waters Spherisorb S3 ODS-2 C18, (3 μm, 4.6 mm × 150 mm, Waters, Milford, MA, USA) column operating at 35 °C and the solvents used were: (A) 0.1% trifluoracetic acid (TFA) in water and (B) acetonitrile, using a gradient flow elution method. Betacyanins maximum absorbance is 530 nm, therefore this was the preference wavelength used to record all chromatograms. For quantitative analysis, a calibration curve was obtained based on gomphrenin III and betalain.
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10

UPLC-DAD Analysis of Phenolic Compounds

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Extract solutions were two-fold diluted with water and filtered through 0.2 μm disposable LC filter disks (30 mm, regenerated cellulose). The DES composed by CC and aromatic acids were diluted with methanol to avoid precipitation at room temperature. The samples were analysed as previously applied (Vieira et al., 2017) using a Shimadzu 20A series UFLC (Shimadzu Corporation, Kyoto, Japan) with a quaternary pump and a photodiode array detector (PDA) coupled to an LC solution software data-processing station using a Waters Spherisorb S3 ODS-2C 18 , (3 μm, 4.6 mm × 150 mm) column operating at 35 °C for separation. Double online detection was carried with a diode array detector (DAD) operating at 280 and 370 nm as preferred wavelengths and the target phenolic compounds were identified according to their UV spectra and retention time (Barros et al., 2013) (link). The results were expressed in mg per g of dry weight (mg/g dw).
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