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Hoechst 33342 nucleic acid stain

Manufactured by Merck Group

Hoechst 33342 is a fluorescent dye used to stain nucleic acids. It binds to the minor groove of DNA and exhibits blue fluorescence upon binding.

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5 protocols using hoechst 33342 nucleic acid stain

1

FGF23 Modulates Erythroid Differentiation

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BEL-A cells66 (link),67 (link), established in the lab of Deborah E. Daniels and Jan Frayne, were cultured in StemSpan™ SFEM (Stemcell Technologies) containing 50 ng/mL SCF, 3 U/mL EPO, 1 μM dexamethasone, and 1 µg/mL doxycycline. To induce erythroid differentiation, expanding cells were transferred to primary medium supplemented with 1 µg/mL doxycycline for 4 days, and for a further 4 days without doxycycline. Cells were cultured with supplementation of either 100 ng/mL FGF23 (R&D Systems) or vehicle control for 48 h before sample collection for analysis. Cell viability was determined by trypan blue exclusion test. For FACS, aliquots of 2 × 105 cells were incubated with band 3 primary antibody (BRIC71; IBGRL) in PBS containing 1% (w/v) BSA (Park Scientific Ltd) and 2 mg/mL glucose (PBS-AG), followed by APC-secondary antibody (BioLegend), or with conjugate antibodies (Annexin V-FITC or CD36-Vioblue; Miltenyi Biotech). Cells were analyzed on a BD LSR Fortessa flow cytometer. From day 6 of differentiation onwards cells were incubated with 5 μg/mL Hoechst 33342 nucleic acid stain (Merck) to distinguish the erythroblast and reticulocyte populations. Propidium iodide was used to exclude non-viable cells from analyses for band 3, CD36, and percentage reticulocyte measurements. Data were analyzed using FlowJo v10.6.1 (FlowJo LLC).
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2

Flow Cytometric Analysis of Erythroid Cells

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Aliquots of 2 × 105 cells were incubated with primary antibodies in PBS containing 1% (w/v) BSA (Park Scientific Ltd) and 2 mg⋅mL−1 glucose (PBS-AG), followed by secondary antibodies (along with conjugate antibodies when appropriate). Cells were analyzed on a BD LSR Fortessa flow cytometer. Propidium iodide was used to exclude non-viable cells from analyses. From mid-differentiation onward (day 6 for cell lines and day 9 for primary erythroid cultures) cells were incubated with 5 μg⋅mL−1 Hoechst 33342 nucleic acid stain (Merck) to distinguish the erythroblast and reticulocyte populations. Data were analyzed with FlowJo v.10.6.1 (FlowJo LLC).
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3

Apoptosis Visualization in Cell Lines

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HCT116 and HT29 cells in their logarithmic growth phase were plated into 6-well plates and incubated for 48 h. The cells were then washed twice with PBS, incubated in the dark for 10 min with Hoechst 33342 nucleic acid stain (Sigma-Aldrich; Merck KGaA), and subsequently examined for their nuclear morphology under a fluorescence microscope (Olympus Corp.).
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4

Immunophenotyping of PB-NHESC-C Cells

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Samples of PB-NHESC-Cs were fixed with 3.5% paraformaldehyde for 20 min, pre-blocked with 2% bovine serum albumin for 10 min at RT, and subsequently stained with fluorescein isothiocyanate (FITC)-conjugated CD45 (1:100, mouse monoclonal IgG; Beckman Coulter) for 30 min at RT in the dark. Hoechst 33342 nucleic acid stain (Sigma Aldrich) was added at 10 μg/mL to the cell suspensions for 20 min at RT in the dark. After washing, PB-NHESC-C was acquired using a laser scanning microscope (Leica SP8 confocal microscope, Leica) with FITC (emission 496–598 nm) and Hoechst (emission 415–470 nm) channels using a 60x objective.
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5

Immunofluorescence Staining Protocol

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Cells were fixed with 4% paraformaldehyde (PFA), washed with phosphate buffered saline (PBS), incubated in blocking solution for 1 hour, and incubated with primary antibodies at 4°C overnight (see Supplemental Table 2 for antibodies information). Then, cells were washed and incubated with the appropriate secondary antibodies conjugated with fluorophores. Hoechst 33342 nucleic acid stain (Sigma-Aldrich) was used to detect cell nuclei. Fluorescence labeling was examined using an Olympus IX71 microscope equipped with DPController and DPManager software.
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