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2 protocols using tp53 do 7

1

Antibody Detection Assay for Epigenetic Markers

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Antibodies used were against MEF2D (BD Bioscience), H3K27ac (ab4729; Abcam, Cambridge, MA, USA). H3K27me3 (ab195477, Abcam) HDAC4 (Paroni et al., 2004), γH2AX (9718, Cell Signalling, Leiden, The Netherlands), TP53 (DO‐7; Dako, Santa Clara, CA, USA), LT SV40 (sc‐147, Santa Cruz), Lamin B1 (ab16048, Abcam), p21 (CP74, Sigma), RACK1 (sc‐17754, Santa Cruz, Dallas, TX, USA), GFP (Paroni et al., 2004).
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2

Comprehensive Immunohistochemical Profiling of Tissue Samples

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The tissue specimen was fixed in formalin and processed routinely for histopathology. Immunohistochemistry (IHC) was performed on 3-µm sections cut from paraffin blocks using a fully automated system (“Benchmark XT System”, Ventana Medical Systems Inc, 1910 Innovation Park Drive, Tucson, Arizona, USA) and the following antibodies: CK7 (OV-TL, 1:1000, Biogenex), p63 (SSI6, 1: 100, DCS), CK5 (clone XM26, 1: 50, Zytomed), EMA (E29, 1:20, Dako), CEA (polyclonal, 1:400, Dako), CK19 (RCK108, 1:300, Dako), p16 (clone JC8, 1:100, Santa Cruz Biotechnology), TP53 (DO-7, 1:50, Dako) and anti-NUT antibody (clone C52B1, 1:45, Cell Signaling).
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