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3 protocols using anti madcam1

1

Multiparametric Flow Cytometry of Stromal Cells

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Stromal cells were suspended in FACS buffer (PBS supplemented with 0.5% bovine serum albumin (BSA) and 5 mM EDTA in PBS) at 107 cells/ml and blocked using 4% of normal mouse serum. 100 μl of cell suspension was stained for 30 min at 4 °C using the following antibodies: PerCP-conjugated anti-CD31 (clone 390), PE-Cy7-conjugated anti-VCAM-1, PE-Cy7-conjugated anti-podoplanin, Alexa Fluor 700 conjugated anti-CD45, APC-Cy7-conjugated anti-CD21/CD35 and anti-MAdCAM-1 (Biolegend). Alexa Fluor 647-conjugated anti-rat-IgG (Invitrogen) was used as a secondary antibody to detect MAdCAM-1 expression. Finally, cells were acquired on a FACSCANTO II (BD Bioscience) and data were analyzed using Flowjo software (Tree star Inc).
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2

Immunofluorescence Analysis of Lymph Nodes

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Lymph nodes were fixed for 3-4 h at 19 °C in freshly prepared 4% paraformaldehyde (Merck Millipore) under agitation. Organs mice were embedded in 4% low-melting agarose (Invitrogen) in PBS and serially sectioned with a vibratome (Leica VT-1200). 40-μm thick sections were blocked in PBS containing 10% FCS, 1 mg/ml anti-Fcγ receptor (BD Biosciences) and 0.1% Triton X-100 (Sigma). Tissues were incubated overnight at 4 °C with the following antibodies: anti-GFP (Aves), anti-DsRed (Living Colors), anti-B220, anti-IgD, anti-CD21/35, anti-PD1 (all from Thermo), anti-CD4, anti-Madcam1, anti-FcεR2a, anti-PDPN (BioLegend), anti-CCL21, anti-Lumican, anti-TRANCE, anti-CXCL13 (R&D Systems). Unconjugated or biotinylated antibodies were detected with the following secondary antibodies: Cy3-conjugated anti-rabbit-IgG, AlexaFluor647-conjugated anti-goat IgG, Dylight649-conjugated anti-syrian hamster-IgG, Dylight649-conjugated Streptavidin (all from Jackson Immunotools), or with AlexaFluor488-conjugated anti-chicken-IgG (Invitrogen). All antibodies used for histology are listed in the Life Sciences Reporting Summary. Microscopy was performed using a confocal microscope (LSM-710, Carl Zeiss), and images were recorded and processed with ZEN 2010 software (Carl Zeiss). Imaris Versions 8 and 9 were used for image analysis.
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3

Immunofluorescence Analysis of Lymph Nodes

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Lymph nodes were fixed for 3-4 h at 19 °C in freshly prepared 4% paraformaldehyde (Merck Millipore) under agitation. Organs mice were embedded in 4% low-melting agarose (Invitrogen) in PBS and serially sectioned with a vibratome (Leica VT-1200). 40-μm thick sections were blocked in PBS containing 10% FCS, 1 mg/ml anti-Fcγ receptor (BD Biosciences) and 0.1% Triton X-100 (Sigma). Tissues were incubated overnight at 4 °C with the following antibodies: anti-GFP (Aves), anti-DsRed (Living Colors), anti-B220, anti-IgD, anti-CD21/35, anti-PD1 (all from Thermo), anti-CD4, anti-Madcam1, anti-FcεR2a, anti-PDPN (BioLegend), anti-CCL21, anti-Lumican, anti-TRANCE, anti-CXCL13 (R&D Systems). Unconjugated or biotinylated antibodies were detected with the following secondary antibodies: Cy3-conjugated anti-rabbit-IgG, AlexaFluor647-conjugated anti-goat IgG, Dylight649-conjugated anti-syrian hamster-IgG, Dylight649-conjugated Streptavidin (all from Jackson Immunotools), or with AlexaFluor488-conjugated anti-chicken-IgG (Invitrogen). All antibodies used for histology are listed in the Life Sciences Reporting Summary. Microscopy was performed using a confocal microscope (LSM-710, Carl Zeiss), and images were recorded and processed with ZEN 2010 software (Carl Zeiss). Imaris Versions 8 and 9 were used for image analysis.
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