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Transmission electron microscope

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A transmission electron microscope (TEM) is a specialized laboratory instrument that uses a beam of highly accelerated electrons to image and analyze the internal structure and composition of solid materials at the nanoscale level. The core function of a TEM is to provide high-resolution imaging, enabling the visualization and analysis of fine details within the sample.

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80 protocols using transmission electron microscope

1

Ultrastructural Analysis of Zebrafish Development

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Zebrafish control animals and zebrafish subjected to MO knockdown for 72 h, 120 h, or 4 months were fixed using 3% glutaraldehyde in 0.1 M PBS (pH 7.0) for 2 h at 4°C. The zebrafish were then post-fixed in 1% osmic acid in the same buffer, dehydrated in ethanol, and embedded in epoxy resin. Thin sections (1,000 nm) were cut and then stained with toluidine blue. Finally, thinner sections (70 nm) were stained with uranium and lead prior to examination using a transmission electron microscope (FEI Company, Hillsboro, OR, USA).
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2

Mitochondrial Morphology Analysis in Cardiac Tissue

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Tissue samples from the ventricular anterior wall were fixed in 2.5% glutaraldehyde (pH = 7.4) overnight at 4°C and 1% osmium tetroxide and dehydrated, embedded in epon, and sectioned. Sections were stained with uranyl acetate and lead citrate and viewed under a transmission electron microscope (FEI, Hillsboro, OR, USA) at a final magnification of ×18,500. Mitochondrial aspect ratio, size, and number were analyzed with Image-Pro Plus software (Media Cybernetics, Rockville, MD, USA). Mitochondria were evaluated in a blind manner about group assignment. Ten randomly selected fields of micrograph were assessed.
Mitochondrial morphology was evaluated in H9c2 cells that were incubated with 100 nM MitoTracker Green probe (Thermo Fisher Scientific, Waltham, MA, USA) for 30 min at 37°C. Images were acquired using a confocal laser scanning microscope (FV 1000, Olympus, Tokyo, Japan). The percentage of cells with fragmented mitochondria (small and round) was determined.
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3

Ultrastructural Analysis of Autophagy in U87-MG Cells

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U87-MG cells were cultured with DMEM without FBS medium overnight. Then, cells were treated by 10 μmol/L AKBA, 20 μmol/L AKBA, and 30 μmol/L AKBA, respectively. After 24 h, cells were harvested and fixed in 0.1 mol/L phosphate buffer containing 3% glutaraldehyde (pH 7.2) at 4 °C overnight. Cells were then washed, post-fixed in 1% OsO4 buffer for 1 h at 4 °C, washed again, dehydrated in a graded series of ethanol, and embedded in spur resin at 56 °C overnight. Sections of 60 nm ultrathin were obtained using the ultramicrotome (Leica, Wetzlar, Germany), stained with uranyl acetate and lead citrate at room temperature for 10 min. The transmission electron microscope (FEI Tecnai Spirit, Hillsboro, OR, USA) was finally used to detect the autophagosomes in U87-MG cells.
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4

Ultrastructural Analysis of L02 Cells

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L02 cells were harvested, fixed with 2.5% glutaraldehyde, washed twice with PBS for 30 min, fixed with 2.5% osmium tetroxide, and stained with 4% aqueous uranyl acetate. The cells were dehydrated with a graded series of acetone, embedded in epoxy resin, and excised into semithin and ultrathin sections. Electron micrographs were performed in the Central Laboratory of Third Military Medical University using a transmission electron microscope (FEI, U.S.A.).
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5

Isolation and Characterization of Exosomes from Cell Lines

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Exosomes were isolated from PSCs, hTERT-HPNE, and PC cell lines using the ultracentrifugation method as previously described or ExoQuick-tc kits (SBI, California, USA).[16 (link),17 (link)] The morphological characteristics of exosomes were observed and imaged using a transmission electron microscope (FEI, Oregon, USA). The particle size of exosomes was analyzed by Beijing Enze Kangtai Biological Technology (Beijing, China).
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6

Transmission Electron Microscopy Sample Preparation

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Cells were harvested and fixed in 4% glutaraldehyde in 0.1 M PB (pH 7.4) for 24 h, followed by 1% osmic acid for 2 h. After fixation, cells underwent osmosis by acetone and 812 resins. Then, samples were embedded with Epon 812 and kept in a thermostatic drying oven for 4 h at 36 °C, 6 h at 45 °C, and 12 h at 60 °C. Afterwards, embedding blocks were successively cut into semithin sections (1–2 μm) and ultrathin sections (50–100 nm). Then, samples were stained with uranyl acetate and lead citrate. Finally, images were captured with a transmission electron microscope (FEI, USA) at an accelerating voltage of 80–120 kV.
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7

Adenovirus Particle Ultrastructural Analysis

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All the cell samples collected were fixed with 2.5% glutaraldehyde overnight followed by 1% osmium tetroxide for 1.5 h. The cell samples were then dehydrated using a graded series of ethanol, rinsed with acetone and permeated overnight with embedding buffer. Sections of 70 nm thicknesses were dual-stained with 2% uranyl acetate and lead citrate. Adenovirus particles were examined by transmission electron microscope (FEI, Hillsboro, OR, USA).
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8

Transmission Electron Microscopy of Biomineral Suspensions

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Suspensions of pure and functionalized BMs were added on Formvar-coated copper grids and vacuum-dried. Samples were observed in a transmission electron microscope (FEI Morgagni, Hillsboro, OR, USA) operating at 80 kV in magnifications of 16 000 and 42 000 times.
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9

Extracellular Vesicle Immunogold Labeling

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The resuspended sEV pellet was deposited on formvar carbon‐coated nickel grids. After rinsing twice with PBS, the grids were placed onto blocking buffer containing 1% bovine serum albumin (BSA, #A‐420‐250, Goldbio, St Louis, MO, USA). Blocked grids were then treated with 15 μg/mL CD63 antibody (#ab134045, Abcam, Cambridge, MA, USA). At last, the grids were rinsed 3 times with blocking buffer prior to incubating with 6‐nm gold‐labeled secondary antibody (#ab41498, Abcam). After air‐dried, uranyl acetate (#23631, Ladd Research, Essex Junction, VT, USA) was used to stain the grids. Finally, the grids were visualized using a transmission electron microscope (FEI Company, Hillsboro, OR, USA).
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10

Preparation and Identification of SARS-CoV-2 VLPs

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The preparation and identification of SARS-CoV-2 VLPs are described previously (Mi et al., 2021 (link)). In brief, the codon-optimized S, E, and M genes of SARS-CoV-2 (GenBank accession no. MN908947.3) were cloned into the pFastBac triple expression vector. Recombinant baculovirus was produced using the Bac-to-Bac system (ThermoFisher Scientific, USA). VLPs were then obtained by infecting ExpiSf9™ insect cells with the recombinant baculovirus and purified via density gradient centrifugation.
SARS-CoV-2 VLPs were adsorbed onto a 400-mesh carbon-coated film for 2 min, which was then stained with 1% phosphotungstic acid for 60 s. After staining, VLP morphology was visualized using FEI Talos F200C transmission electron microscope (FEI, Czech Republic). For immunoelectron microscopy, VLPs were captured on carbon-coated copper grids. The grids were incubated with rabbit anti-spike polyclonal antibody (1:50 dilution; SinoBiological, China) at room temperature for 1 h, followed by treatment with goat anti-rabbit immunoglobulin G (1:20 dilution) (whole)-gold conjugate (10 nm) (BOSTER, China). Finally, the negative staining of the grids was performed using 1% phosphotungstic acid. VLPs were observed on the transmission electron microscope (FEI, Czech Republic) at 200 kV and 100–200 kfold magnification.
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