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6 protocols using hrp conjugated donkey anti rabbit igg

1

Western Blot Protein Detection

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Cells were lysed with lysis buffer (25 mM Tris-HCl pH 7.4, 150 mM NaCl, 1 mM EDTA, 1% NP-40 and 5% glycerol, supplemented with a protease inhibitor cocktail (Halt™ Protease inhibitor cocktail, Thermo Scientific)). Proteins in the cell lysates were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), and then transferred onto nitrocellulose membranes (Bio-Rad Laboratories). The membrane was blocked in 5% skim milk prior to incubation with indicated primary antibodies. Horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG (Biolegend) or (HRP)-conjugated donkey anti-rabbit IgG (BioLegend) was used as secondary antibodies. Primary antibodies used in this study include mouse-anti-Myc (Thermo Scientific), rabbit-anti-FLAG (Cell Science Technology), rabbit-anti-HA (Cell Science Technology), mouse-anti-S1 (a kind gift from Dr. Qigai He, Huazhong Agricultural University), and mouse-anti-PEDV N (SD 6–29, Medgene Labs).
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2

Quantitative Bacterial Surface Antigen Assay

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Overnight grown GAS cultures (~ OD600 of 0.9–1) were washed with PBS and concentrated to OD600 of 6 in PBS. Nunc MaxiSorp plates (Thermo) were coated with 50 µl/well of bacterial cell suspension, blocked with 3% BSA/PBS for 1 h, and incubated with rabbit antibodies (3 μg/ml) specific to either PrsA1 or PrsA2, or rabbit antibodies purified from pre-immune rabbit sera for 2 h, followed by HRP-conjugated donkey anti-rabbit IgG (BioLegend, Cat. No. 406401; 1:5,000 dilution in 3% BSA/PBS with 0.05% Tween-20) for 1 h. Plates were washed, developed with TMB substrate (BioLegend) for 30 min in the dark, stopped with 0.1 N H2SO4, and measured at 450 nm. The OD450 readings of PrsA1- and PrsA2-specific signals were then subtracted from the OD450 readings of pre-immune IgG control, and normalized to the values obtained from M1 GAS A20 strain.
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3

FGF-2 and Cytokine-Induced Signaling Pathways

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Fibroblasts from a healthy control, P1, and P1 LV fibroblasts were serum starved for 2 h and then stimulated in the presence or absence of 100 ng/ml human FGF-2 in DMEM. After 15 or 30 min, cells were lysed in SDS sample buffer. Protein lysates were separated by 5–15% gradient SDS-PAGE, transferred onto nitrocellulose membrane, and immunoblotted with rabbit anti-phospho ERK1/2 (Cell Signaling Technology) and HRP-conjugated donkey anti–rabbit IgG (BioLegend).
For the analysis of STAT5 phosphorylation in response to cytokines, PBMCs from two healthy controls and P3 were cultured in 96-well round-bottom plates (200,000 cells/well) in the presence of 10 ng/ml IL-2 or 10 ng/ml IL-7, in RPMI medium, 10% FBS, and APC-conjugated anti-CD4 mAb at 37°C and 5% CO2 for 20 min. After washing, cells were permeabilized with Cytofix (BD) at 37°C for 10 min and then washed and stained with Pacific blue–conjugated anti-pSTAT5 (BD). The cells were washed, and pSTAT5 expression was analyzed by flow cytometry upon gating on live CD4+ cells.
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4

Western Blot Analysis of Testicular UBL4A and UBL4B

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Testes from 10-week-old mice were homogenized in lysis buffer (50 mM Tris, pH 7.5, 150 mM NaCl, 0.5% Triton X–100, 5 mM EDTA and 1 mM Na3VO4) containing protease inhibitors (Roche). Western blot was carried out as described previously (Jiang et al., 2014 ). The primary antibodies are rabbit anti-β-actin (Abcam, ab8227; 1:3,000), rabbit anti-UBL4A (Yang et al., 2007 (link)) and rabbit anti-UBL4B (Yang et al., 2007 (link)). The secondary antibody is HRP-conjugated donkey anti-rabbit IgG (BioLegend, 406401; 1:10,000).
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5

STO-609 Modulates CaMKIV and CREB

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Fibroblasts of proband A-4 and two healthy donors were maintained in Dulbecco's Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum, 50 U/ml penicillin, and 50 g/ml streptomycin. Near-confluent fibroblasts were treated with STO-609 (5 µM; Merck) or vehicle (DMSO). Two hours later, lysates were prepared with lysis buffer (150 mM NaCl, 1% NP-40, 50 mM Tris, pH 8, protease inhibitors [cOmplete Mini, Merck]), followed by agitation and centrifugation. Supernatants were subjected to SDS-PAGE and semidry immunoblotting. Primary antibodies used (all rabbit, 1:1000) were anti-CaMKIV (ThermoFisher PA1-542), anti-CREB (Cell Signaling 9197), and anti-phospho-CREB (Cell Signaling 9198). Secondary antibody was HRP-conjugated donkey anti-rabbit IgG (BioLegend 406401). Chemiluminescent detection was performed with ECL Prime (Amersham). Protein abundance was quantified by signal density (ImageJ).
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6

Western Blot Analysis of Virus-Infected or Plasmid-Transfected Cells

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Virus-infected or plasmid-transfected cells were harvested and lysed with RIPA lysis buffer (25 mM Tris–HCl pH 7.4, 150 mM NaCl, 1 mM EDTA, 1% NP-40, and 5% glycerol, supplemented with a protease inhibitor cocktail (Halt™ Protease Inhibitor Cocktail, Thermo Fisher Scientific, MA, United States). The mixture was centrifuged at 12,000 g, 4°C for 10 min and the resulting supernatants were mixed with sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) loading buffer and boiled for 5 min. Proteins from the cell lysates were separated using SDS-PAGE, and then transferred to nitrocellulose membranes (Bio-Rad Laboratories, CA, United States). The membrane was blocked with 5% skim milk prior to incubation with the indicated primary antibodies. Horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG (Biolegend, CA, United States) or (HRP)-conjugated donkey anti-rabbit IgG (Biolegend, CA, United States) were used as secondary antibodies. Primary antibodies used in this study included mouse-anti-Myc (Thermo Fisher Scientific, MA, United States), rabbit-anti-FLAG (ab1162, abcam, Cambridge, United Kingdom), rabbit-anti-HA (ab9110, abcam, Cambridge, United Kingdom), and mouse-anti-PEDV-N (SD 6–29, Medgene labs, SD, United States), rabbit polyclonal anti-Zinc finger antiviral protein (ab154680, abcam, Cambridge, United kingdom).
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