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Anti iba1 primary antibody

Manufactured by Fujifilm
Sourced in Japan

The Anti-Iba1 primary antibody is a laboratory tool used for the detection and localization of Iba1 protein, a marker for microglia cells in immunohistochemistry and immunofluorescence applications. This antibody can be used to identify and analyze microglial cells in various biological samples.

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11 protocols using anti iba1 primary antibody

1

Immunophenotyping of Zika-infected Microglia

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BV2 cells were mock-treated, infected with ZIKVPE243 or ZIKVMR766, with an MOI of 1, or stimulated with LPS + ATP as a positive control. After 24, 48, and 72 hpi, cells were fixed and permeabilized as described previously. Then, the cells were incubated overnight with the primary anti-Iba1 antibody at 1:500 (Wako, code 019-19741), anti-CD68 antibody at 1:500 (Bio-Rad, MC1957, Hercules, CA, USA), or with anti-MHC II conjugated with phycoerythrin—PE (eBioscience, San Diego, CA, USA, ref. 12-5322-81). The cells were then stained with the respective anti-IgG secondary antibodies conjugated to AlexaFluor488 or AlexaFluor647. To stain cell nuclei, a mounting medium containing 4,6-diamidino-2-phenylindole (DAPI) (blue) (Vectashield—Vector Laboratories, Mowry Ave Newark, CA, USA) was used. Fluorescence microscopy was performed simultaneously with the same antibody solutions, and all micrographs were taken with the same settings using a Zeiss LSM 710 confocal microscope equipped with a 63× objective and digital imaging system (Roper Scientific camera and Zen (black edition) software).
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2

Microglia Response to LPS Exposure in Mice

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The P30 mice were injected with 10 mL/kg (stock solution of 1 mg/mL) of lipopolysaccharide (LPS) intraperitoneally at P30, as previously described [32 (link)]. After 6 and 24 h, the mice were sacrificed, and their eyeballs were enucleated for Western blot and qRT-PCR analyses, respectively. At 24 h post-injection, immunostaining to identify Iba1-positive cells was also performed. For Iba1-positive microglial cell counting, the cryosections were rinsed with PBS and then blocked in 5% normal donkey serum and 0.3% Triton X-100 in PBS for 1 h at room temperature. The retinal cryosections were then incubated in the primary anti-IBA-1 Antibody (Wako Chemicals, 019-19741, Osaka, Japan). The secondary Alexa Fluor 555 or 488 anti-rabbit antibodies (ThermoFisher Scientific, A31572; A21206, Eugene, OR, USA) diluted in PBS (1:500) were applied for 2 h at room temperature. Nuclei were visualized by counterstaining with DAPI in a fluorescence mounting medium (Southern Biotech, 0100-20, Birmingham, AL, USA), and images were acquired with a Keyence BZ-X800 Fluorescence Microscope (Itasca, IL, USA). Investigators blinded to the results counted the number of Iba1-positive cells in the retinal sections. Fluorescent images were taken, and the Iba1-positive cells were calculated in a vision field of 200 µm2.
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3

Quantifying Spinal Microglia Activation

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Twenty-four hours after treatment with intrathecal unconjugated saporin or Mac-1-saporin, mice were perfusion-fixed using phosphate buffered saline (PBS) followed by Lana’s fixative (4% paraformaldehyde and 14% picric acid in PBS). The lumbar spinal cord (L3–L5) was resected and post-fixed in Lana’s fixative for 4 hr, and then dehydrated in 30% sucrose solution overnight. Samples were then embedded in Tissue-Plus Optimal Cutting Temperature (O.C.T.) Compound (Fisher Health Care, Norwich, UK). Lumbar spinal cord sections (12 μm thick) were stained for Iba1 using an anti-Iba1 primary antibody (1:2,000, rabbit; Wako, Japan), followed by AlexaFluor 488-conjugated anti-rabbit secondary antibody (1:300; Thermo Fisher). Stained sections were mounted with DAPI-containing media (Vectashield; Vector Laboratories, Burlingame, CA, USA). ImageJ was used to analyze confocal microscope images by percent area florescence [25 (link),55 (link)] within the medial dorsal horn.
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4

Immunohistochemical Analysis of Spinal Cord Microglia

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Spinal cords of the indicated mice were fixed in 4% paraformaldehyde at 4°C overnight and then cryoprotected in a 30% sucrose solution for 24 hours at 4°C. Tissues were embedded in optimal cutting temperature compound for frozen section. The sections were permeabilized for 10 min using 0.5% Triton X-100 in PBS and then blocked with 1% normal goat serum and 1% BSA in PBS for 2 hours at room temperature. Samples were stained with anti-Iba1 primary antibody for 48 hours at 4°C (1:250; Wako). After washed five times with 0.1% Triton X-100 in PBS, the sections were incubated for 1 hour with secondary Alexa Fluor 594–conjugated rabbit antibodies. Nuclei were counterstained with 4njugated rabbit antibodies. (DAPI). Slides were examined and photographed using an Olympus DP70 fluorescence microscope. The positive area of Iba1 was measured using ImageJ software and analyzed using GraphPad Prism 7.
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5

Immunofluorescent Labeling of Microglia in Hippocampal Slices

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The hippocampal slices were washed 3 times in Tris-Buffered Saline (TBS) for 30 minutes. Free-floating slices were incubated with citrate buffer at 70 °C for 30 minutes, for antigen retrieval. After, blocking solution [BSA (4%), Triton X (0.5%) in TBS] was added to the slices for 2 h, and they were incubated overnight with anti-Iba-1 primary antibody (1:500; Wako Chemicals, Osaka, Japan). On the next day, the slices were incubated with the secondary antibody Alexa Fluor 594 anti-rabbit (1:1000; Invitrogen, Carlsbad, CA, USA) for 1 h, washed, mounted in gelatinized slides and coverslipped with Fluoromount media (Sigma-Aldrich, St. Louis, MO, USA)77 (link).
The slides were observed under a Zeiss fluorescence microscope in 10× magnification lens. Pictures of the CA1 layer of both hippocampi were taken for quantification of labeled cells.
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6

Immunofluorescent Staining of Brain Tissue

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Brain tissue was washed in 1× TBS and blocked for 1.5 h at RT in 1× TBS containing 0.3% Triton X-100 and 5% normal goat serum. Brain sections were incubated overnight at 4°C in anti-GFAP (1:1000, Agilent/Dako, #Z033429-2) or anti-Iba1 primary antibody (1:1000, Wako, #019-1974) diluted in blocking solution. The next day, brain sections were washed in 1× TBS, incubated for 2 h at RT in secondary antibody diluted in blocking solution (1:500, Alexa Fluor 594 goat anti-rabbit, Invitrogen, #A-11037) and washed again in 1× TBS. Sections were then incubated in 0.002% Thioflavin S (Sigma, #T1892) in 1× TBS for 8 min, washed twice in 50% ethanol for 1 min and washed once more in 1× TBS for 5 min. Sections were mounted and coverslipped using Prolong Diamond antifade media (ThermoFisher, #P36970). Images were acquired using a Zeiss Axio Scan.Z1 at 20× magnification (Carl Zeiss AG, Oberkochen, Germany).
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7

Hippocampal Microglia Activation by TNF-α

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10-week-old male FVB mice were injected i.p. with vehicle or 250 μg/kg TNF-α (n = 8 per group) and tissue was collected 24 h later. Immunohistochemical staining of Iba1 protein in the dentate gyrus of the hippocampus was performed using a rabbit polyclonal anti-Iba1 primary antibody (1 : 500, Wako Chemicals) and a fluorescent Alexa 555 goat anti-rabbit secondary antibody (1 : 500, Invitrogen), as previously described [27 (link)].
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8

Microglial Density Analysis in Spinal Cord

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Seven to ten days after capsaicin plus vibration, bicuculline plus vibration, or CGP 52432 plus vibration, mice were perfusion fixed using phosphate-buffered saline followed by Lana’s fixative (4% paraformaldehyde and 14% picric acid in phosphate-buffered saline). The lumbar spinal cord (L3–L5) was resected and postfixed in Lana’s fixative for 4 hours and then dehydrated in 30% sucrose solution overnight. Samples were embedded in Tissue-Plus Optimal Cutting Temperature Compound (Fisher Health Care, Norwich, United Kingdom). Lumbar spinal cord sections (12 μm) were stained for Iba1 using an anti-Iba1 primary antibody (1:2,000, rabbit; Wako, Japan), followed by AlexaFluor 488-conjugated anti-rabbit secondary antibody (1:300; Thermo Fisher, Waltham, MA, USA). Stained sections were mounted with DAPI-containing media (Vectashield; Vector Laboratories, Burlingame, CA, USA). Confocal microscope images were analyzed to obtain the number of microglia per mm3 (i.e., cell density) within the dorsal horn by dividing the number of DAPI-positive, Iba1-immunoreactive cells by the volume of the region of interest. Cell count analysis was completed using ImageJ.
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9

Microglial Density Analysis in Spinal Cord

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Seven to ten days after capsaicin plus vibration, bicuculline plus vibration, or CGP 52432 plus vibration, mice were perfusion fixed using phosphate-buffered saline followed by Lana’s fixative (4% paraformaldehyde and 14% picric acid in phosphate-buffered saline). The lumbar spinal cord (L3–L5) was resected and postfixed in Lana’s fixative for 4 hours and then dehydrated in 30% sucrose solution overnight. Samples were embedded in Tissue-Plus Optimal Cutting Temperature Compound (Fisher Health Care, Norwich, United Kingdom). Lumbar spinal cord sections (12 μm) were stained for Iba1 using an anti-Iba1 primary antibody (1:2,000, rabbit; Wako, Japan), followed by AlexaFluor 488-conjugated anti-rabbit secondary antibody (1:300; Thermo Fisher, Waltham, MA, USA). Stained sections were mounted with DAPI-containing media (Vectashield; Vector Laboratories, Burlingame, CA, USA). Confocal microscope images were analyzed to obtain the number of microglia per mm3 (i.e., cell density) within the dorsal horn by dividing the number of DAPI-positive, Iba1-immunoreactive cells by the volume of the region of interest. Cell count analysis was completed using ImageJ.
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10

Microglial Phagocytosis Assay

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Microglial phagocytosis was assayed as previously described (Gao et al., 2017 (link)). Briefly, after one week in culture, microglia were exposed to RO0480500-002 (RO48, 5 μM in 0.05% DMSO) or its corresponding vehicle (0.05% DMSO), and LPS (100 ng/ml) or its corresponding vehicle (medium alone) for 24 hr. Following treatments, green fluorescent beads (FluoSpheres® Carboxylate-Modified Microspheres (505/515), ThermoFisher) were added (1.5 μl of a 1:10 dilution), and the cells were incubated for 2 hr at 37°C in 5% CO2 atmosphere. Cells were washed three times with ice-cold culture medium to arrest bead uptake, and immediately fixed with 4% PFA at room temperature for 15 min. Fixed cultures were then permeabilized with 0.4% Triton X-100 in PBS (15 min, room temperature), blocked with 5% normal goat serum (1 hr, room temperature), and incubated with anti-Iba1 primary antibody (1 hr, room temperature; rabbit, 1:500, Wako), followed by anti-rabbit AlexaFluor 594 secondary antibody (1 hr, room temperature; 1:750, Invitrogen). Nuclei were stained with DAPI for 10 min at room temperature. Cells were stored in PBS at 4°C until image acquisition.
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