The largest database of trusted experimental protocols

8 protocols using accela pda detector

1

LC/MS System for Compound Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The LC/MS system consisted of a 3201 S1-2 binary pump, a 3202 S1-2 vacuum degasser, a 3014 S1-2 column heater, a 3012 S1-2 column switch system, a 3133 S1-2 sampler from SHISEIDO (Tokyo, Japan), an Accela PDA detector (Thermo Fisher Scientific Inc., Waltham, MA) and a 3200Q TRAP mass detector (Applied Biosystem Inc., California), controlled by Analyst® software (version 1.5.1).
+ Open protocol
+ Expand
2

HPLC-HRMS Enantioselective Analysis of Praziquantel

Check if the same lab product or an alternative is used in the 5 most similar protocols
The HPLC–HRMS chromatographic system included an Accela 1250 pump, a PAL HTC autosampler, an Accela PDA detector and a Xcalibur data system (ThermoFisher Scientific, Waltham, MA, USA). Water was purified by an Ultra Clear system (Siemens, Berlin, Germany). Chromatographic separation of R-PZQ, S-PZQ and IS mebendazole were obtained on a column of Daicel  CHIRALPAK® AS-RH (4.6 mm × 150 mm, 5 μm) fitted with a guard column (10 × 4.0 mm, 3 μm) at room temperature (about 25 °C). The autosampler was set at 4 °C during analysis. The mobile phase consisted of methanol and formic acid (90:10, v/v) at the flow rate of 0.55 ml/min. The relative parameters were as follows: ESI ion source, 3.00 kV spray voltage, sheath gas (N2) and auxiliary gas (N2) 35 Arb and 10 Arb, respectively, capillary heater temperature 320 °C. The [M -H]+ quasi-molecular ion peaks of R-PZQ and S-PZQ were detected at 313.1911 mass-to-charge (m/z) ratio (the two enantiomers have the same molecular weight and molecular structure and differ only with regard to symmetry), while the IS (mebendazole) was detected at 296.1036 m/z. The total run time was 25.0 min.
+ Open protocol
+ Expand
3

Quantification of Flavonoids in Broccoli

Check if the same lab product or an alternative is used in the 5 most similar protocols
Freeze-dried broccoli sample (0.2 g) was extracted with 10 mL methanol/water (60:40, v/v). The supernatant was filtered through a 0.45 μm PVDF syringe filter (VWR Scientific, Seattle, WA), and was transferred into a 2 mL HPLC vial for flavonoid analysis. The UHPLC–PDA–HRMS system consisted of an LTQ Orbitrap XL mass spectrometer with an Accela 1250 binary pump, a PALHTC-Accela1-TMO autosampler, an Accela PDA detector (Thermo Fisher Scientific, San Jose, CA), and a G1316A column compartment (Agilent, Santa Clara, CA)). Separation was carried out on a Synergi Hydro-RP column (250 mm × 2.00 mm, 4 μm. Phenomenex, Torrance, CA) at a flow rate of 0.3 mL/min. The mobile phase consisted of A (0.1% formic acid in water, v/v) and B (0.1% formic acid in acetonitrile, v/v).
The quantification was carried out using molar response factors with rutin as reference standard as described in previous report (Lin et al., 2012 (link)). The concentrations of individual flavonoids based on DW were obtained from the analyses of the freeze-dried samples, and the values were further converted to the concentrations as FW by calculating the moisture losses from FW to DW.
+ Open protocol
+ Expand
4

Kinetic Study of M3G Degradation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The degradation of M3G at different
concentrations (3.33 × 10–5, 2 × 10–4, and 1 × 10–3 M) was followed
over time at pH 8.1 by HPLC coupled with DAD (HPLC-DAD). Stock solutions
of M3G (1 × 10–4, 6 × 10–4, and 3 × 10–3 M) were prepared in 0.1 M HCl.
Then, 1 mL of NaOH 0.1 M, 1 mL of universal buffer at pH 8.1, and
1 mL of each stock M3G solution were added to a glass vial, and the
solution was analyzed over time by HPLC-DAD on a Thermo Ultimate 3000
liquid chromatograph. The decrease in the concentration of M3G was
followed over time during 7 days in a 250 × 4.6 mm i.d., 2.7 μm
Poroshell 120 reversed-phase C18 column (Agilent) at 25 °C. The
eluents used were (A) 7.5% (v/v) formic acid in water and (B) 7.5%
(v/v) formic acid in acetonitrile at a flow rate of 0.4 mL/min. The
gradient consisted of 3% to 15% B in 11 min, then 25% B in 23 min,
30% B in 27 min, and then isocratic for 4 min. Detection was carried
out from 200 to 800 nm in a Thermo Accela PDA detector. Due to the
low concentration of M3G (3.33 × 10–5 M) needed
to avoid self-association and the low sensitivity of HPLC analysis
when compared to UV–visible spectroscopy, several aliquots
(1 mL) of the degradation kinetic (pH 8.1) were taken, lyophilized,
and then resuspended in 0.1 mL of 0.1 M HCl to be analyzed by HPLC
to tentatively identify the degradation products.
+ Open protocol
+ Expand
5

UHPLC-HRMSn Characterization of Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
The UHPLC-HRMSn system consists of a LTQ Orbitrap XL MS with an Accela 1250 binary Pump, a PAL HTC Accela TMO autosampler, an Accela PDA detector (Thermo Fisher Scientific, San Jose, CA), and an Agilent G1316A column compartment (Agilent, Santa Clara, CA). The operating conditions of the electrospray (ESI) source were similar to our previous work [25 (link)] with the differeces were as follows: sheath gas at 70 (arbitrary units), spray voltage at 4.5 kV; capillary temperature, 250 °C; capillary voltage, 50 V; tube lens offset, 120 V. MSn activation parameters used an isolation width of 2.0 amu, max ion injection time of 200 ms, and normalized collision energy at 35%. The UHPLC separation was carried out on a Hypersil Gold C18 column (200 mm × 2.1 mm, 1.9 μm) (Thermo Fisher Scientific, San Jose, CA) with a flow rate of 0.3 mL/min. The mobile phase consisted of a combination of A (0.1% formic acid in water) and B (0.1% formic acid in acetonitrile). A gradient elution program was employed as follows: from 5% to 25% B over 0–30.0 min, to 30% B at 40.0min, to 85% B at 60.0 min, to 95 % B at 65.0 min, and then a return to the initial conditions. The column temperature was set at 50 °C.
+ Open protocol
+ Expand
6

Oral and Intramuscular Pharmacokinetics in Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
To study the relationship between pharmacokinetic characteristics and treatment efficacy in vivo, compounds were administered by oral (50 mg/kg) and intramuscular (12.5 mg/kg) methods to healthy BALB/c mice (22~22 g). Subgroups of 3 mice each were bled at 0.25, 0.5, 1, 2, 4, 8, 16, 24, 32, and 48 h post-administration. Then, 300 μl samples of plasma were collected and centrifuged at 2,500 g for 15 min. The compounds in the plasma were extracted on Oasis HLB cartridges (Waters, Massachusetts, USA) with praziquantel as the internal standard. The HPLC-HRMS system used for separation and analysis consisted of an Accela 1250 pump, a PAL HTC autosampler, an Accela PDA detector and an Xcalibur data system (Thermo Fisher Scientific, Waltham, MA, USA). Compounds were separated on a 3-μm Waters Atlantis 2.1 mm × 100 mm column (Massachusetts, USA) with a mobile phase containing methanol and formic acid at a flow rate of 0.35 ml/min. The data were analyzed by the non-compartmental model present in DAS 2.0 (Drug Analysis System, Shanghai University of T.C.M, China). Detailed pharmacokinetic experimental methods, including a representative HPLC-MS chromatogram, a standard curve, and a plot used to confirm precision, are shown in the Supplementary Data.
+ Open protocol
+ Expand
7

UHPLC-Orbitrap Velos Pro Mass Spectrometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
All experiments were performed on a Thermo Scientific Accela UHPLC system with an Accela 600 Pump, Accela Autosampler and Accela PDA Detector coupled to a Thermo Fisher Scientific LTQ Orbitrap Velos Pro mass spectrometer (Thermo Scientific, Waltham, MA, USA). All samples were centrifuged using a 5424R Eppendorf centrifuge (Eppendorf, Hamburg, Germany). All ACQUITY UPLC columns (BEH C18 (2.1 mm × 100 mm, 1.7 μm, 130 Å), BEH Phenyl (2.1 mm × 100 mm, 1.7 μm, 130 Å) and CSH Phenyl-Hexyl (2.1 mm × 100 mm, 1.7 μm, 130 Å)) and all ACQUITY UPLC VanGuard pre-columns (BEH C18 (2.1 mm × 5 mm, 1.7 μm, 130 Å), BEH Phenyl (2.1 mm × 5 mm, 1.7 μm, 130 Å) and CSH Phenyl-Hexyl (2.1 mm × 5 mm, 1.7 μm, 130 Å)) were purchased from Waters (Milford, MA, USA).
+ Open protocol
+ Expand
8

Holomycin Production in S. albus

Check if the same lab product or an alternative is used in the 5 most similar protocols
For holomycin production, S. albus mutants were incubated in TSBY broth (3% tryptone soy broth, 10.3% sucrose, 0.5% yeast extract) at 28°C for 2 days and then transferred to YD broth (0.5% yeast extract, 1% malt extract, 0.4% glucose, 0.2% MgCl2, 0.15% CaCl2 [pH 7.2]) and incubated for 4 days. The fermentation culture was centrifuged at 5,000 × g for 10 min, and the supernatant was extracted with two volumes of ethyl acetate. The extract was evaporated to dryness under reduced pressure and redissolved in methanol for further analysis. Analysis of holomycin was performed with a Phenomenex C18 column (5 µm, 4.6 by 250 mm) eluted at a flow rate of 1 ml/min over a 30-min gradient as follows: T = 0, 10% B; T = 2 min, 10% B; T = 7 min, 30% B; T = 27 min, 100% B; T = 30 min, 90% B (phase A, H2O; phase B, methanol). The LC-ESI-HRMS analysis was carried out on an LTQ XL Orbitrap (Thermo, Fisher Scientific) coupled with an Accela PDA detector, Accela PDA autosampler, and Accela pump, using electrospray ionization in the positive-ion mode.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!