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Anti flag donor beads

Manufactured by PerkinElmer

Anti-FLAG donor beads are a type of laboratory equipment used for protein purification. They are designed to bind to proteins that have been tagged with a specific FLAG peptide sequence. These beads can be used to isolate and purify FLAG-tagged proteins from complex biological samples.

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6 protocols using anti flag donor beads

1

Protein-Protein Interaction Analysis

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Myc-TEAD1 and Flag-YAP or Flag-VGLL4 were transfected into HEK293A cells and 24 – 48 h post-transfection, cells were lysed with lysis buffer (20 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 1% Triton X-100, PhosSTOP phosphatase inhibitor cocktail, cOmplete EDTA-free protease inhibitor). Anti-c-myc acceptor beads (Perkin Elmer) were added to each well and incubated for 2 h prior to addition of anti-FLAG donor beads (Perkin Elmer). Samples were incubated overnight in darkness and Alpha signals were recorded using Perkin Elmer EnVision plate reader.
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2

Claudin-4 Binding Assay with C-CPE

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The purified claudin-4 samples were diluted to 40 nM (final 10 nM) in the reaction buffer [50 mM Tris-HCl buffer (pH 7.0), containing 0.05% βDDM, 0.002% CHS, and 400 mM NaCl], and 5 μl aliquots were dispensed per well in a 384-well plate (AlphaPlate-384, PerkinElmer) on ice. In the blank well, an equal volume of the reaction buffer was dispensed. The purified GST-tagged C-CPE was also diluted to 160 nM (final 40 nM) in the reaction buffer, and a 5 μl aliquot of diluted GST-tagged C-CPE was added to all wells, mixed by shaking 30 sec, and then incubated on ice. Two hours later, a 5 μl aliquot of 80 μg/ml (final 20 μg/ml) Glutathione acceptor beads (PerkinElmer) in the reaction buffer was added to all wells, mixed by shaking 30 sec, and then incubated on ice for 1 hr in the dark. Finally, a 5 μl aliquot of 80 μg/ml (final 20 μg/ml) Anti-FLAG donor beads (PerkinElmer) in the reaction buffer was added to all wells, mixed by shaking 30 sec, and then incubated on ice for 1 hr in the dark. Before measurement, the plate was incubated at room temperature for 20 min in the dark. Alpha counts were measured by EnVision (PerkinElmer), using the standard AlphaScreen settings.
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3

Protein-Protein Interaction Assay

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Example 3

Myc-TEAD1 and Flag-YAP or Flag-VGLL4 were transfected into HEK293A cells and 24-48 h post-transfection, cells were lysed with lysis buffer (20 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 1% Triton X-100, PhosSTOP phosphatase inhibitor cocktail, cOmplete EDTA-free protease inhibitor). Anti-c-myc acceptor beads (Perkin Elmer) were added to each well and incubated for 2 h prior to addition of anti-FLAG donor beads (Perkin Elmer). Samples were incubated overnight in darkness and Alpha signals were recorded using Perkin Elmer EnVision plate reader.

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4

Protein-Protein Interaction Analysis

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Myc-TEAD1 and Flag-YAP or Flag-VGLL4 were transfected into HEK293A cells and 24 – 48 h post-transfection, cells were lysed with lysis buffer (20 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 1% Triton X-100, PhosSTOP phosphatase inhibitor cocktail, cOmplete EDTA-free protease inhibitor). Anti-c-myc acceptor beads (Perkin Elmer) were added to each well and incubated for 2 h prior to addition of anti-FLAG donor beads (Perkin Elmer). Samples were incubated overnight in darkness and Alpha signals were recorded using Perkin Elmer EnVision plate reader.
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5

Inhibition of Mouse Pol κ-REV1 CTD

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Example 15

The FLAG-tagged mouse POL κ-REV1 CTD was diluted in PBS containing 1 mM Tris(2-carboxyethyl)phosphine (TCEP) and 0.005% Tween-20 at a final protein concentration of 1 nM and transferred to individual wells of a 96-well, half-area, white opaque plate (PerkinElmer). Serially diluted RE01 stock solutions in 50% DMSO were added to the wells to yield final inhibitor concentrations of 0-25 μM in 2% DMSO. After 30 min incubation, anti-FLAG Donor Beads (PerkinElmer) were added to a final concentration of 20 ng/μL to individual wells and incubated for an hour. His8-tagged mouse REV7/3 was subsequently added to the reaction mixture to a final concentration of 10 nM and incubated for 30 min. Anti-His Acceptor Beads (PerkinElmer) were added to a final concentration of 20 ng/μL and incubated for an hour. The chemiluminescent signals were observed with a PerkinElmer Enspire Reader at the excitation wavelength of 680 nm and detection wavelength of 615 nm.

Fitting of the inhibition curve (FIG. 1B) yields an IC50 value of 0.78 μM+/−0.16 μM for compoiund RE01. Error bars represent standard error (n=3).

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6

Inhibition Assay of Mouse POL κ-REV1

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The FLAG-tagged mouse POL κ-REV1 CTD was diluted in PBS containing 1 mM Tris(2-carboxyethyl)phosphine (TCEP) and 0.005% Tween-20 at a final protein concentration of 1 nM and transferred to individual wells of a 96-well, half-area, white opaque plate (PerkinElmer). Serially diluted JH-RE-06 stock solutions in 50% DMSO were added to the wells to yield final inhibitor concentrations of 0–25 μM in 2% DMSO. After 30 min incubation, anti-FLAG Donor Beads (PerkinElmer) were added to a final concentration of 20 ng/μL to individual wells and incubated for an hour. His8-tagged mouse REV7/3 was subsequently added to the reaction mixture to a final concentration of 10 nM and incubated for 30 min. Anti-His Acceptor Beads (PerkinElmer) were added to a final concentration of 20 ng/μL and incubated for an hour. The chemiluminescent signals were observed with a PerkinElmer Enspire Reader at the excitation wavelength of 680 nm and detection wavelength of 615 nm.
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