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Lcms 2020 single quadrupole

Manufactured by Shimadzu

The LCMS-2020 Single Quadrupole is a liquid chromatography-mass spectrometry (LC-MS) system designed for qualitative and quantitative analysis. It features a single quadrupole mass analyzer for high-speed scanning and sensitivity. The system combines liquid chromatography and mass spectrometry techniques to provide accurate separation and detection of analytes in complex samples.

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4 protocols using lcms 2020 single quadrupole

1

HPLC-MS Analysis of Compounds

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The HPLC system consisted of a Shimadzu LC-20AD solvent delivery pump, a DGU-20A3 degasser, a CTO-20A column oven, a SPD-M20A photodiode array detector, and a SIL-20A auto sampler (Shimadzu, Kyoto, Japan). The mass spectrometer was a Shimadzu LCMS-2020 single quadrupole equipped with a ESI source interface. At the end of data collection, the chromatograms were processed with the software LCMS Solution (Shimadzu, Kyoto, Japan).
For chromatographic analysis, an YMC-ODS C18 column (250 mm × 4.6 mm, 5 μm) was used. HPLC separation was performed using a linear gradient and a flow rate of 1.0 mL/min. The column temperature was 35°C. The mobile phase consisted of acetonitrile (A) and water containing 0.1% formic acid (B) using the elution gradient 5-25% A at 0-35 min, 25-35% A at 35-65 min, 35-50% A at 65-80 min, 50-70% A at 80-90 min, 70-5% A at 90-95 min and 5% A at 95-100 min. Detection wave-length was set at 254 nm. The ESI-MS spectra were acquired in both negative and positive modes scanning from 100 to 800. The typical ion source parameters were as follows: ESI probe temperature 350°C, CDL temperature 280°C, heat block temperature 320°C, ESI probe voltage 4.5 kV, detector voltage 1.5 kV, and nebulizing gas flow 1.5 L/min.
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2

Phytochemical Analysis of Coconut Water

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In order to determine its phytochemical constituents, the coconut water was subjected to LC-MS (Shimadzu LCMS-2020 Single Quadrupole) analysis by injecting directly into the machine via a loop as previously described [60 (link)]. The operating parameters were: Stop time: 60 min; Photodiode Array (PDA) sampling frequency: 1.5625 Hz; Operating mode: low pressure gradient; Pump A: LC-2030 Pump; Mobile Phase A, B, C, and D: 0.1% formic acid, methanol, acetonitrile, and water respectively; Flow rate: 0.3000 mL/min; Start and End wavelengths: 220 and 400 nm respectively; Oven and Maximum Temperatures: 40 and 50 °C respectively; Start and End time: 0.00 and 60.00 min respectively; Acquisition mode: Scan; Scan Speed: 5000 u/s; Polarity: Positive; Event Time: 0.25 s; Detector Voltage: +0.00 kV; Threshold: 0; Start and End m/z: 100.00 and 1000.00 respectively; Interface: ESI; Drying Gas: 15.00 L/min.
The phytochemicals were identified by direct search and comparison of mass spectral (MS) data with those of the Food Metabolome Database (www.foodb.ca, accessed on 5 September 2023).
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3

Photochemical Conversion of Carboxylic Acid

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Leaving the solution of compound 19 containing a –COOH functionality in the central cyclohexene ring in methanol converted it the corresponding methyl ester 21. A stock solution of 21a (5 mM DMSO) was diluted in water to a final concentration of 40 μM. Phenylalanine (40 mM) was used as an internal standard. The photolysis was run for 60 min at rt with 20 mW/cm2 780 nm (± 20 nm) light in a 1.5 mL HPLC vial. At time = 0 (prior to irradiation) and 60 min the samples were analyzed by a direct loop injection method with a Shimadzu LCMS-2020 Single Quadrupole instrument (normal resolution). The relative ion counts were calculated by integrating the extracted ion chromatogram (EIC) of the m/z of NP3C, oxindole 26, Fischer’s aldehyde analogue 27, and corresponding carbonyl species 28 and 29, and then dividing by the ion count of the phenylalanine internal standard.
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4

LC-MS Metabolite Profiling and Identification

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The extracted cell metabolites were subjected to LC-MS (Shimadzu LCMS-2020 Single Quadrupole) analysis. This was carried out by injecting the extracted metabolites (1 mg/mL) directly into the machine via a loop.
The operating parameters of the machine were: Stop time: 60 min; Photodiode Array (PDA) sampling frequency: 1.5625 Hz; Operating mode: low pressure gradient; Pump A: LC-2030 Pump; Mobile Phase A, B, C and D: 0.1% formic acid, methanol, acetonitrile and water respectively; Flow rate: 0.3000 ml/min; Start and End wavelengths: 220 and 400 nm respectively; Oven and Maximum Temperatures: 40 and 50 °C respectively; Start and End time: 0.00 and 60.00 min respectively; Acquisition mode: Scan; Scan Speed: 5000 u/s; Polarity: Positive; Event Time: 0.25 s; Detector Voltage: +0.00 kV; Threshold: 0; Start and End m/z: 100.00 and 1000.00 respectively; Interface: ESI; Drying Gas: 15.00L/min.
The Human Metabolome Database (HMBD) was utilized to identify the metabolites by direct search and comparison of mass spectral (MS) data with that of the database [28 (link)].
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