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5 ethynyl 2 deoxyuridine edu labeling detection kit

Manufactured by RiboBio
Sourced in China

5-ethynyl-2-deoxyuridine (EdU) labeling/detection kit is a tool for detecting and visualizing DNA synthesis in cells. The kit contains reagents for the incorporation of EdU, a thymidine analog, into newly synthesized DNA. The incorporated EdU can then be detected through a chemical reaction, enabling the identification and quantification of proliferating cells.

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28 protocols using 5 ethynyl 2 deoxyuridine edu labeling detection kit

1

Assessment of Cell Viability and Proliferation

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Cell vitality was detected using the Cell Counting Kit-8 (CCK-8) assay kit (Bimake). Briefly, transfected cells were seeded into 96-well plates and incubated with CCK-8 reagent every 24 hours according to the manufacturer’s instructions. For colony formation assay, cells after transfection were cultured in 6-well plates, and after 14 days, the cells were fixed with methanol and stained with 0.1% crystal violet. Visible colonies were photographed. Cell proliferation was identified using Ethynyldeoxyuridine (EdU) assay following the manufacturer’s protocol of 5-ethynyl-2-deoxyuridine (EdU) labeling/detection kit (Ribobio, Guangzhou, China). The transfected cells were treated with 50 µM Edu labeling medium and incubated for 2 hours. Next, the cells were fixed with 4% paraformaldehyde and the cell membrane was permeated with 0.5% Triton X-100. Subsequently, cells were added with anti-Edu working solution and DAPI staining solution. Edu positive cells were identified and counted under fluorescent microscopy. The percentage of Edu positive cells was calculated from five random fields in three wells.
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2

EdU Assay for Cell Proliferation

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Proliferating cells were assessed using a 5-ethynyl-2-deoxyuridine (EdU) Labeling/Detection Kit (RiboBio, Guangzhou, China) according to the manufacturer’s protocol. The GC cells were cultured in 96-well plates at a density of 1x104 cells per well and transfected with the circGRAMD1B overexpressing plasmid or the siRNA1/siRNA2 for 48 h. Then, 50 μl/L EdU labeling media were added to the plates, which were incubated for 2 h at 37 °C under 5% CO2. After treatment with 4% paraformaldehyde and 0.5% Triton X-100, cells were stained with the anti-EdU working solution. Nuclei were stained with Hoechst 33342 reaction solution. The percentage of EdU-positive cells was calculated from five random fields in three wells under a confocal laser scanning microscopy (LSM800, Carl Zeiss AG, Germany).
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3

EdU Labeling and Detection Protocol

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Based on the protocol outlined in the manual of the 5-ethynyl-2-deoxyuridine (EdU) labeling/detection kit (RiboBio, Guangzhou, PR, China), Cells of the control and experimental groups were digested and inoculated into a 96-well plate. After 24h of culture, labeling medium with 50 μM of EdU was added to the cell culture, and was incubated for 2 h at 37 °C with 5% CO2. The cells were then fixed with 4% paraformaldehyde (pH 7.4) for 30 min and incubated with glycine for 5 min. After being washed with PBS, cells were stained with anti-EdU working solution at room temperature for 30 min. They were then washed with 0.5% Triton X-100 in PBS, and incubated with DAPI at room temperature for 3 min. Cells were then observed using fluorescent microscopy.
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4

Quantifying Cellular Proliferation via EdU Assay

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Proliferating cells were determined by using the 5-ethynyl-2’-deoxyuridine (EdU) labeling/detection kit (Ribobio, Guangzhou, China) according to the manufacturer’s protocol. Briefly, SW480 and HCT116 cells were cultured in 96-well plates at 5 × 103 cells per well, transfected with pCDNA-BANCR or empty vector for 48 h, then 50μM EdU labeling medium was added to the cell culture and allowed to incubate for 2 h at 37°C under 5% CO2. Afterwards, cultured cells were fixed with 4% paraformaldehyde (pH 7.4) for 30 min and treated with 0.5% Triton X-100 for 20 min at room temperature. After washing with PBS, staining with anti-EdU working solution was performed at room temperature for 30 min. Subsequently, the cells were incubated with 100 μL Hoechst 33342 (5 μg/mL) at room temperature for 30 min, followed by observation under a fluorescent microscope. The percentage of EdU-positive cells was calculated from five random fields in three wells.
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5

Cellular Proliferation Assay Using EdU

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Cells were incubated with 50 µM 5-ethynyl-2-deoxyuridine (EdU labeling/detection kit;
Ribobio, Guangzhou, China) for 12 hours and fixed with 4% paraformaldehyde (PA; pH 7.4)
for 30 minutes. Cells were incubated with glycine for 5 minutes. Then anti-EdU solution
was added into cells at room temperature and stored for 30 minutes after which cells were
washed in PBS containing 0.5% Triton X-100. Finally, 5 μg/mL Hoechst 33342 was added to
the cells and incubated for 30 minutes at room temperature to stain cellular nuclei and
observed under a fluorescence microscope (Nikon, Japan).
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6

Cell Proliferation Assay Using EdU

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Cell proliferation were detected using 5-ethynyl-2′-deoxyuridine (EdU) labeling/detection kit (Ribobio). Firstly, cells with a density of 1 × 104 cells/well were planted on 96-well plates, after 24 h, 50 mM EdU were added into the plate for an additional 2 h. Then the cells were fixed with 4% formaldehyde in PBS for 30 min and incubate with glycine for 5 min. After washing with PBS and 0.5% TritonX-100 in PBS, cells were incubated with 1 × Apollo dye at room temperature in dankness for 30 min. At last, wash cells with 0.5% TritonX-100 in PBS and methanol, incubate cells with 1 × Hoechst 33342 dye at room temperature in dankness for 30 min. Preserve labeled cells in PBS. Observe and photograph using fluorescence microscopy, select five images randomly for cell counting, Assays were performed with five parallels.
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7

Quantifying Cell Proliferation via EdU Assay

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Proliferating cells were evaluated by using a 5-ethynyl-2-deoxyuridine (EdU) labeling/detection kit (Ribobio, Guangzhou, China), according to the manufacturer's protocol. Hoechst 33342 (5 μg/ml) was used to label cell nuclei (blue), followed by observation under a fluorescence microscope at 200× magnification. The percentage of EdU-positive cells (red) was calculated from three random fields in three wells. The EdU incorporation rate was expressed as the ratio of EdU-positive cells to total Hoechst 33342-positive cells, which were counted using Image-Pro Plus (IPP) 6.0 software (Media Cybernetics). A higher percentage of positive spots represents a higher proliferation capacity of cells.
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8

Cell Viability and Proliferation Assay

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Cell viability was detected via the Enhanced Cell Counting Kit‐8 (Beyotime, Shanghai, China) and 5‐ethynyl‐2′‐deoxyuridine (EDU) Labeling/Detection Kit (Ribobio, Guangzhou, China). Details are described in the Supporting Information.
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9

EdU Proliferation Assay Protocol

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Cell proliferation was detected with 5-ethynyl-2′-deoxyuridine (EdU) labeling/detection kit (Ribobio, Guangzhou, China). Cells were planted in 24 well plates (1×105 cells/well). EdU labeling medium (1:1000) was added into wells and incubated for 2 hours as the protocol indicates. After EdU staining, cells were counter stained with Hoechst33342. The percentage of EdU+ cells was calculated from five random fields each in three wells.
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10

EDU-based Proliferation Assay

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5-ethynyl-2-deoxyuridine (EDU) labeling/detection kit (Ribobio, Guangzhou, China) was used to assess the cell proliferation. Cells were grown in 96-well plates at 5 × 103 cells/well. Forty-eight hours after transfection, 50 μM EdU labeling media was added to the 96-well plates and they were incubated for 2 h at 37°C under 5% CO2. After treatment with 4% paraformaldehyde and 0.5% Triton X-100, cells were stained with anti-EdU working solution. DAPI was used to label cell nuclei. The percentage of EdU-positive cells was calculated after analyses of fluorescent microscopy. Five fields of view were randomly assessed for each treatment group.
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