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Rhodamine fibronectin

Manufactured by Cytoskeleton
Sourced in United States

Rhodamine fibronectin is a fluorescently labeled version of the extracellular matrix protein fibronectin. Fibronectin is a large glycoprotein that plays a crucial role in cell adhesion, migration, and differentiation. The rhodamine dye is attached to the fibronectin molecule, allowing it to be visualized using fluorescence microscopy.

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7 protocols using rhodamine fibronectin

1

Microposts Functionalization with Fibronectin

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A flat PDMS stamp was cleaned and then incubated with 50 μg/ml rhodamine fibronectin (Cytoskeleton, Denver, CO, USA) in deionized water for 1 hour. The stamp was dried under sterile airflow and deposited gently on the micropost array, previously subjected to UV ozone treatment. A gentle pressure was applied to the stamp. The contact between the microposts and the stamp was ensured for at least 1 minute. Subsequently the substrates were sterlized in 70% ethanol and immersed in 0.4% Pluronics F127 (Sigma–Aldrich, St. Louis, MO) in PBS for 1 hour to prevent non-specific protein absorption to the non-functionalized surface of the PDMS microposts. Finally the substrates were rinsed with sterile MilliQ water and kept in PBS before use46 (link).
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2

Micro-Contact Printing of Fibronectin Patterns

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PDMS stamps were fabricated using standard photolithography techniques.23 (link) The stamps contain features of either 10 µm wide lines with 10 µm spacing in between or a fishnet pattern with 5 µm wide lines with 10 µm spacing at an angle of ±15°, 30° or 45° with respect to the 0° axis (Fig. 1). PDMS stamps were incubated with 50 mg/mL rhodamine fibronectin (Cytoskeleton, Denver, CO) in PBS for one hour, after which they were dried using compressed air. The thin film constructs were treated with UV-ozone (PDS UV-ozone cleaner; Novascan, Ames, IA) for 8 minutes just before transfer of the fibronectin onto the constructs. The stamps were positioned in such a way that the 0° axis of the stamp coincided with the length direction of the to be cut films. After 10 minutes of conformal contact, the constructs were rinsed three times with PBS and stored in PBS at 4 °C until use.1 (link),23 (link)

Schematic overview of the micro-contact printing layout of the four different fibronectin patterns. The fibronectin lines are depicted in grey, the spacing in black and the angle α is depicted in the top left corner. The short arrows represent 5 µm and the long arrows represent 10 µm.

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3

Cell Migration on Fibronectin-Coated Scaffolds

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In preparation for the experiments, the scaffolds were first affixed to the glass bottom of 6‐well dishes (MatTek Corp., Ashland, MA) using sterile, high‐vacuum grease (Dow Corning, Midland, MI). The scaffolds were then soaked in 70% ethanol for disinfection, followed by two phosphate‐buffered saline (PBS) washes (Thermo Fisher Scientific). Subsequently, the fibers were coated with either 4 µg ml−1 fibronectin (Invitrogen, Carlsbad, CA) or 4 µg ml−1 rhodamine fibronectin (Cytoskeleton Inc., Denver, CO) for 2 h prior to cell seeding to aid cell attachment to the fibers. For the quantification of how fibronectin concentration mediates cell migration, two additional fibronectin concentrations of 1 and 16 µg ml−1 were used. Once the cell culture reached ≈80% confluency, 0.25% Trypsin (ATCC, Manassas, VA) was added, and the culture was incubated for ≈5 min. After the cells detached from the flask surface, 3 ml of fresh cell media was added to dilute the effect of the Trypsin. The entire solution was then placed in a centrifuge at 1000 RPM for 5 min. Following the centrifugation, the media was aspirated, and the cells were resuspended in fresh media. Finally, cells were seeded at a density of ≈3 000 000 cells ml−1 on the scaffolds.
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4

Fibronectin Adsorption on PCL and ISB-P Films

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Rhodamine fibronectin (#FNR01, Cytoskeleton, Inc.) was reconstituted to a final concentration of 20 μg/ml (2 μg/100 μl) in PBS. Then, PCL and ISB‐P films 6 mm in diameter were individually immersed in 100 μl of working solution at 37°C. After 1 h, the fluorescence intensity of the supernatants was measured using a 535 nm excitation and 585 nm emission filter set. The adsorption amount of fibronectin was determined by subtracting the fluorescence of a group without protein (n = 5).
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5

Tracking Cell Migration via Rhodamine Fibronectin

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Four-chamber glass bottom dishes were coated with 1 μg/ml Rhodamine Fibronectin (Cytoskeleton, Denver, CO, USA; FNR01) according to the manufacturer’s protocol. MRC-5V1 cells were transfected with the aforementioned pQCXIB vectors 24 h prior to seeding onto the coated chamber dish. Migration of the transfected cells was recorded by time-lapse imaging starting 2 h post-seeding with a spinning disk confocal microscope. A z-stack consisting of 16 steps with an interval of 1 μm between successive steps of each field was acquired and a maximum intensity projection was performed in MetaMorph software. Time-lapse images were then subjected to customize cell-tracking analysis in Imaris Image Analysis Software 8.4.1 (Bitplane, Belfast, UK).
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6

Microcontact Printing of Fibronectin Patterns

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PDMS stamps for microcontact printing were made by casting PDMS (Dow-Corning) at a 10 : 1 ratio onto a silicon wafer with SU-8 3050 (Microchem) features 40 μm in height. The wafer moulds were created using standard SU-8 soft lithography; photomasks with 30–400 μm features were created in AutoCAD and printed onto Mylar positive masks (CAD/Art services). After PDMS casting and polymerisation, the stamps were peeled off, and incubated with 10 μg mL−1 rhodamine-fibronectin (Cytoskeleton Inc.) at room temperature for 30 min. The fibronectin was then rinsed away with deionised water, and the mould dried under an air stream. PDMS stamps were inverted onto ethanol-cleaned glass slides (VWR International) and pressed down with forceps until contact was made for ~1 min. Stamps were then peeled off, leaving printed features on the glass.
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7

Calcium-Induced Osteocyte Pillar Dynamics

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MLO-Y4 cells stained with the Ca2+ indicator Fluo-8 AM (AAT Bioquest, Sunnyvale, CA) dissolved in 20% Pluronic F-127 in DMSO (Invitrogen, Carlsbad, CA) were seeded onto rhodamine-fibronectin (Cytoskeleton, Inc, Denver, CO) coated micropillars fabricated from PDMS with 1 µm diameter and 7 µm height38 (link),39 (link). Cells were seeded on the pillars for 45 min to maintain a cortical actin cytoskeleton. Particle tracking was performed using a threshold-based algorithm to determine the maximum displacement of pillars underneath an osteocyte following a Ca2+ response induced by ATP (50 µmol·L−1, n = 3) or ionomycin (5 µmol·L−1, n = 3) infused gently into the dish with a syringe. Static pillars away from the cell were tracked as a control, and medium without inhibitors was added as additional control sample.
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