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5500 qtrap triple quadrupole linear ion

Manufactured by AB Sciex
Sourced in Germany

The 5500 QTRAP triple-quadrupole linear ion trap mass spectrometer is a high-performance analytical instrument designed for advanced quantitative and qualitative analysis. It combines the capabilities of a triple-quadrupole with a linear ion trap, providing enhanced sensitivity, selectivity, and versatility for a wide range of applications.

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4 protocols using 5500 qtrap triple quadrupole linear ion

1

Plasma Lipid Quantification by Targeted LC-MRM

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For the inter-instrument cross-validation of the plasma quantification, targeted LC-MRM analyses were performed using a 5500 QTrap triple-quadrupole linear ion trap mass spectrometer equipped with a Turbo V Ion Source (AB SCIEX, Darmstadt, Germany) with polarity switching. The LC, ionization, detection, and MRM transition parameters for selected lipids were set as previously described22 (link),48 (link) and are provided as a Source data file.
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2

Quantitative Analysis of Endocannabinoids

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A total of 20 μL of the solution of extracted eCBs were injected and separated on a Phenomenex Luna 2.5 μm C18(2)-HST column, 100 × 2 mm, combined with a pre-column (C18, 4 × 2 mm; Phenomenex, Aschaffenburg, Germany), by increasing acetonitrile containing 0.1% formic acid over 2 min from 55 to 90%, and maintaining it at 90% for 5.5 min. The separated eCBs were flow-through analyzed using MRM on a 5500 QTrap triple-quadrupole linear ion trap mass spectrometer equipped with a Turbo V Ion Source (AB SCIEX, Darmstadt, Germany). Positive and negative ions were simultaneously analyzed using the ‘positive-negative-switching’ mode. The following MRM transitions were monitored for quantification of eCBs: AEA, m/z 348.3 to m/z 62.3; 2-AG, m/z 379.1 to m/z 287.2; AA, m/z 303.05 to m/z 259.1. Calibration solutions were prepared using commercially available standards of high purity, spiked with a mixture of deuterated eCBs and run in triplicates. Quantification of eCBs was carried out using Analyst 1.6.1 software (AB SCIEX, Darmstadt, Germany). The eCB concentrations were normalized to protein content (for tissues) measured by BCA and to serum volume.
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3

Quantification of MITP by LC-MS/MS

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Samples were analyzed on a QTRAP 5500 triple-quadrupole linear ion trap mass spectrometer (Sciex) equipped with an electrospray ionization (ESI) source. The system included two Shimadzu LC20ADXR pumps and a Shimadzu SIL20ACXR autosampler. A sample of 20 μl was injected onto a XSelect CSH C18 XP column (2.1 mm × 100 mm, 2.5 μm, 130Å) (Waters). Analytical separation was achieved using a mobile phase consisting of water with 0.1% formic acid (Solution A) and acetonitrile with 0.1% formic acid (Solution B), at a flow rate of 200 μl/min. MITP was eluted by a linear gradient of 15% to 25% solution B over 5 min. Solution B was increased to 100% over the next 0.1 min and held for 0.5 min, followed by a decrease back to starting conditions of 15% solution B over 0.1 min and held for 3 min for a total run time of 8 minutes.
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4

Quantitative MITP Analysis via QTRAP-MS

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Samples were analyzed on a QTRAP 5500 triple-quadrupole linear ion trap mass spectrometer (Sciex) equipped with an electrospray ionization (ESI) source. The system included two Shimadzu LC20ADXR pumps and a Shimadzu SIL20ACXR autosampler. A sample of 20 μl was injected onto a XSelect CSH C18 XP column (2.1 mm x 100 mm, 2.5 µm, 130Å) (Waters) analytical separation was achieved using a mobile phase consisting of water with 0.1% formic acid (Solution A) and acetonitrile with 0.1% formic acid (Solution B), at a flow rate of 200 μl/min. MITP was eluted by a linear gradient of 15% to 25% solution B over 5 min. Solution B was increased to 100% over the next 0.1 min and held for 0.5 min, followed by a decrease back to starting conditions of 15% solution B over 0.1 min and held for 3 min for a total run time of 8 minutes.
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