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Cd5 pe

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The CD5-PE is a reagent for the detection and quantification of CD5 expression on human cells. It is a fluorochrome-conjugated monoclonal antibody that binds to the CD5 antigen, which is expressed on a subset of T lymphocytes. This reagent can be used in flow cytometry applications to enumerate and characterize CD5-positive cells.

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10 protocols using cd5 pe

1

Multifaceted Cellular Analysis by FACS

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Analysis of samples was performed on a LSR2 and Fluorescence-activated Cell Sorting(FACS) on an ARIA or Fusion-instrument (BD Biosciences, San Jose, CA, USA). Single cells were gated on the basis of FSC-Height(FSC-H) and FSC-Area(FSC-A), and live cells were gated out using Propidium Iodide(PI) or the LIVE/DEAD™ Fixable Aqua Dead Cell Stain Kit (ThermoFisher Scientific, Waltham, MA, USA). Antibodies were obtained from BioLegend (San Diego, CA, USA): CD1a PB, CD3 Pe-Cy7, CD3 APC-Cy7, CD3 BV421, CD4 PerCp-Cy5.5, CD5 PE, CD8 Amcyan, CD8 APC-Cy7, CD14 PB, CD19-APC, CD27 APC-Cy7, CD33 PE, CD34 PerCp-Cy5.5, CD34 APC, CD45 Amcyan, CD45 Pe-Cy7, CD56 BV421, CD69 Pe-Cy7, CD137 PE, interferon-γ PE, IL-2 PB, TCRαβ-PE, and TCRγδ APC; BD Biosciences (San Jose, CA, USA): CD7-FITC; ThermoFisher Scientific (Waltham, MA, USA): CellTrace™ Violet Cell Proliferation Kit; and SCBT (Dallas, TX, USA): WASp-AF647.
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2

Immunophenotyping of Peripheral Blood B Cells

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15 mL EDTA-treated blood samples were obtained after an overnight fasting. Peripheral blood mononuclear cells (PBMCs) were isolated by density gradient centrifugation over Ficoll-Paque Plus. For immunofluorescence staining, the following monoclonal antibodies (mAbs) were used: CD5-PE (BD Pharmingen), CD19-FITC/CY5 (eBioscience), CD27-PE (eBioscience), CD38-CY7 (BioLegend), CD95-PE (eBioscience), and IgD-FITC (Invitrogen). To define B cell subpopulations, 106 PBMCs were incubated with mAbs for 30 minutes on ice. The PBMCs were simultaneously stained with different fluorescein washed with PBS twice. Four-color immunofluorescence analysis was performed on the same day by flow cytometry (Bechman Coulter Inc.). The fetched cells suspension was gated for lymphocyte and at least 10,000 lymphocyte events were acquired per sample.
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3

Comprehensive Lymphocyte Phenotyping by Flow Cytometry

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To assess lymphocytes by flow cytometry, single cell suspensions were prepared and incubated with primary antibody for 30 minutes on ice. After staining for surface proteins, cells were incubated with Propidium Iodide (BD Biosciences, San Jose, CA, USA) for 10 minutes as a live/dead stain. After staining, cells were fixed with 0.6% formalin. The antibodies used were CD4-PE, CD5-PE, CD19-FITC, CD69-FITC, CD86-PE, B220-APC, CD93-BB515, CD279-APC, CXCR5-PECy7 (all BD Biosciences), IgM-FITC (Southern Biotech), IgD-APC-Cy7 (BioLegend, San Diego, CA, USA), CD21-eFlour450, and CD23-PE-Cy7 (eBioscience Inc., San Diego, CA, USA). Apoptosis was analyzed with Telford reagent. Flow cytometry was performed with a BD LSRII Flow Cytometer and analyzed with FACSDiva software (BD Biosciences, v.8.0).
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4

Neutralization of rhBAFF by Belimumab

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Recombinant human BAFF (rhBAFF) was from PeproTech (Rocky Hill, NJ, USA). Rituximab, trastuzumab and bevacizumab were from Roche (Basel, Switzerland), and belimumab was from GlaxoSmithKline (Brentford, UK). In neutralization experiments, binding of belimumab to rhBAFF was allowed for 45–60 min at room temperature prior to adding. Idelalisib and ibrutinib were from Selleckchem (Munich, Germany), and venetoclax was from Active Biochem LTD (Kowloon, Hong Kong). The antibodies CD5-APC, CD5-PE, CD19-FITC and anti-active caspase-3-AlexaFluor647 were purchased from BD Pharmingen (San Diego, CA, USA), CD3-eFluor450 was from eBioscience (San Diego, CA, USA). Rabbit isotype control-AlexaFluor647 was from Cell Signaling Technology (Danvers, MA, USA), LIVE/DEAD™ Fixable Aqua Dead Cell Stain Kit for 405 nm was from Invitrogen (Waltham, MA, USA), 7-aminoactinomycin D (7-AAD) and CD3-APCFireTM 750 were from BioLegend (San Diego, CA, USA). Tetramethylrhodamine ethyl ester perchlorate (TMRE) was purchased from Sigma (St. Louis, MO, USA) and used at a concentration of 50 nM. Primary cells were cultivated in RPMI-1640 GlutaMAXTM (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% fetal calf serum (Biochrom AG, Berlin, Germany) and 1% penicillin/streptomycin (Lonza, Basel, Switzerland).
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5

Flow Cytometric Immunophenotyping of Immune Cells

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For flow cytometry, cells were stained with mAbs in PBS with 1% BSA for 20 minutes in the dark at 4°C. Cells were subsequently washed and fixed with a 1% paraformaldehyde/PBS solution before analysis on BD FACSCalibur flow cytometer (BD Immunocytometry Systems, [BDIS] San Jose, CA) or MACSQuant® Analyzer (Miltenyi Biotec). The anti-human antibodies used were CD19 Pacific Blue, CD24 PE-Cy7, CD38 APC, CD27 APC-Cy7, CD21 FITC, CD1c PE (all from Biolegend, San Diego, CA), CD10 PE, CD5 PE, CD23 PE, IgD PE, IgM PE-Cy5 (all from BD Bioscience), BAFF-R PE (eBioscience Inc., San Diego, CA). The following anti-mouse antibodies were used: CD24 Pacific Blue, CD21 FITC, CD23 PE, BAFF-R PE, CD21 APC, SA-APC-Cy7 (secondary antibody for IgD biotin staining), IgM PE-Cy7 (all from Biolegend), and IgD Biotin (eBioscience). Living cells were identified by forward scatter and side scatter gating and/or exclusion of 7-aminoactinomycin-D (eBioscience) added immediately prior to data acquisition or fixation. Flow cytometry data analysis was performed using Flowjo data analysis software (TreeStar, Ashland, OR).
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6

Immunophenotyping of PBMCs and Whole Blood

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PBMCs (1 × 106 cells) were incubated with anti-CD19-PEDy647, anti-CD38-PE, anti-CD41a-FITC, anti-CD41a-PE (Immunotools, Friesoythe, Germany), anti-CD19-PECy7, anti-CD27-APC, anti-BAFFR-FITC, anti-TACI-PE (BioLegend, San Diego, USA), anti-CD86-PE, anti-IgG-PE, anti-IgD-FITC (BD), anti-IgA-FITC, and anti-IgM-PE (Dako, CA, USA) mAbs and the corresponding isotype controls. Whole blood (100 μl) was incubated with anti-CD4-PECy7 (BioLegend), CD5-PE (BD Biosciences), CD19-PEDy647, and CD41a-FITC (Immunotools). Red blood cells were lysed, and white cells fixed using BD FACS lysing solution (BD Biosciences) to be analyzed by flow cytometry.
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7

Comprehensive Multiparametric Flow Cytometry

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The antibodies used for flow cytometry included: CD4-PE (RM4-5), CD4-v450 (RM4-5), CD5-PE (53-7.3), CD8-APC (53-6.7), CD19-FITC (ID3), CD22-PE (Cy34.1), CD45R/B220-APC (RA3-6B2), CD62L-APC (MEL-14), CD69-FITC(H1.2F3), CD86-PE (GL1), CD93(AA4.1), CD95-PE.Cy7 (Jo2), CD134-Biotin (OX-86), CXCR5-PE.Cy7 (2G8), PD-1-APC (J43), and PNA-FITC (L7281) (all from BD Biosciences, San Jose, CA), IgM-FITC) (R6-60.2 from Southern Biotech), IgD-APC-Cy7 (11-26c.2a from BioLegend, San Diego, CA, USA), CD21/CD35-eFlour450 [eBio4F3 (4E3)], and CD23-PE-Cy7 (B3B4) (both from eBioscience Inc., San Diego, CA, USA). Biotinylated antibodies were detected using FITC-conjugated streptavidin (BD Biosciences). Flow cytometric analysis was performed using various combinations of these antibodies on single cell suspensions of splenocytes. Stained cells were analyzed in the UNMC Flow Cytometry Research Facility using the BD LSR II flow cytometer. Data were analyzed using FACSDiva software, version 8.0.2 (BD Biosciences). For flow cytometry analyses, splenocytes were collected from mice that were 5–6 months of age.
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8

Comprehensive B-cell Immunophenotyping

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Surface staining was done by incubating fresh PBMC with a cocktail of antibodies containing 5 μl CD19 PerCP (Clone 4G7, BD, Catalog No. 345778), 3 μl CD21 PE-CY7 (Clone B-ly4, BD, Catalog No. 561374), 20 μl CD27 FITC (Clone Ll28, BD, Catalog No. 340424), 3 μl CD23 BV421 (Clone M-L233, BD, Catalog No. 562707), 10 μl sIgD PE(Clone IA6–2, BD, Catalog No. 555779), 10 μl sIgM APC (Clone G20–127, BD, Catalog No. 551062) in panel one and 5 μl CD19 PerCP (Clone 4G7, BD, Catalog No. 345778), 3 μl CD21 PE-CY7 (Clone B-ly4, BD, Catalog No. 561374), 20 μl CD27 FITC (Clone Ll28, BD, Catalog No. 340424), 10 μl CD 5 PE(Clone Ll7F12, BD, Catalog No. 345782), 3 μl CD38 APC (Clone HB7, BD, Catalog No. 345807) and 3 μl CD24 BV421 (Clone ML5, BD, Catalog No. 562789) in panel two. Incubations were done for 20 min at room temperature in the dark. Then cells were washed and re-suspended in FACS (Fluorescence Activated Cell Sorting) buffer. Data were acquired on a BD FACSCanto II with Diva software and analyzed using FlowJo software (Version 9.6.2).
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9

Comprehensive Immunological Assays for In-Depth Analysis

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Gum arabic, activated carbon, 2,7-dichlorofluorescein diacetate (DCFDA), toluidine blue, protease inhibitor cocktail tablets, phosphatase inhibitor cocktail tablets, MILLIPLEX MAP Mouse Cytokine/Chemokine Magnetic Bead Panel were purchased from Merck KGaA (Darmstadt, Germany). 25% Aqueous Solution Glutaraldehyde, Paraformaldehyde, Sorensen's Phosphate Buffer, 2% Aqueous Solution Osmium Tetroxide, Ethyl Alcohol, Acetone, Araldite, Dibutyl phthalate (DBP) were purchased Electron Microscopy Sciences (Hatfield, USA). Leukocyte Activation Cocktail with BD GolgiPlug™, FACS antibodies include anti-mouse I-A/I-E-BV510, IgG1-BB700, IgM-BV605, IgE-BV786, IgD-BV711, CD1d-BV421, CD5-PE, CD45-BUV395, CD19-APC, CD45R/B220-BUV496, CD45-APC-Cy7, CD3e-FITC, CD4-V450, CD8-BV510, CD25-BV605, IL-4-PE-Cy7, IFN-γ-PE, FoxP3-AF647, CD103-BUV395, F4/80-BV711, CD80-BV650, CD11b-BV510, Ly6-G-PerCP Cy5.5, PE-Ly6-C, CD45-APC-Cy7, CD11c--AF700 were purchased from BD (Heidelberg, Germany); Another FACS antibody Anti-mouse-IL-17A-BV650 was purchased from eBioscience (Frankfurt am Main, Germany). Anti-mouse HMGB1, Anti-mouse phospho-p65, anti-mouse phospho-p38, anti-mouse GAPDH and anti-rabbit IgG HRP were obtained from Cell signaling Technology (Frankfurt am Main, Germany). IgE and histamine ELISA kits were purchased from Abcam (Berlin, Germany).
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10

Quantifying Cellular Uptake of Fatty Acids and Glucose

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Uptake studies FA and glucose uptake into cells was assessed using BODIPY (ThermoFisher) and 2-deoxy-2-[(7-nitro-2,1,3-benzoxadiazol-4-yl) amino]-D-glucose (2-NBDG), respectively. Dead cells were excluded from the analysis by staining with 5 µg/mL propidium iodide (PI) solution. Data acquisition and analysis were conducted using a CytoFLEX S instrument and CytExpert software (Beckman Coulter, Brea, CA). Changes in FA and glucose uptake were calculated from the mean fluorescence intensities (MFIs) of the labels, with correction for background using unlabeled or isotype controls. CD45-V450, CD5-PE, CD19-PECy7, and CD36-BV605 antibodies (BD Biosciences, Franklin Lakes, NJ) were used on primary samples.
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