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4 protocols using p 4e bp t37 46

1

Characterization of TSC2 Signaling Pathway

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P-TSC2 S939 (LS-C358381) was from Biozol (Sontheim, Germany). Antibodies specific for TSC2/tuberin (#4308), P-AKT S473 (#4060), AKT (#4691), P-S6K T389 (#9234), P-S S235/6 (#2211), S6 (#2217), P-ERK T202/Y204 (#4370), ERK (#4696), P-4E-BP T37/46 (#2855), as well as MG132 and cyclohexamide were from Cell Signaling (Danvers, MA, USA). Involucrin (SY8; ab20202) was from Abcam (Cambridge, UK), Actin antibody (A1978) was from Sigma-Aldrich (St. Louis, MO, USA) and LAMP-2 antibody (sc-18822) from SantaCruz Biotechnology (Dallas, TX, USA). LY294002, U0126 were from were from Calbiochem (San Diego, CA, USA).
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2

Western Blot Analysis of Epigenetic Regulators

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Cells were lysed using modified RIPA buffer (50 mM Tris–HCl, 150 mM NaCl, 1% NP-40, pH 8.0, 1 × protease inhibitor cocktail) and lysates were subjected to western blotting with the indicated primary antibodies. Antibodies to HK1, HK2, Di-methyl-H3-Lys4, Acetyl-H3-Lys9, LSD1, DNMT1, CHD1, CHD3, CHD4, MTA1, AKT, pAKTS473, mTOR, p-mTOR S2448, pS6K T398, p4E-BP T37/46, and HDAC1, 2, 3, 6 were purchased from cell signaling technologies (Beverly, MA, USA). Antibodies to IDH1, IDH2, and SDHA were from GeneTex, Inc. (Irvine, CA, USA). Anti-PHF14 antibody was from Proteintech Group, Inc. (Rosemont, IL, USA). Actin and GAPDH antibodies were obtained from Millipore (Billerica, MA, USA). Proteins bound by these antibodies were detected using a chemiluminescent detection kit (Pierce; Thermo Fisher Scientific, Inc., Waltham, MA, USA).
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3

Quantification of mRNA and Protein Levels

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The mRNA expression was quantified by real-time RT-PCR using the TaqMan probes (Life Technologies, Carlsbad, CA, USA) in an Applied Biosystems QuantStudio 3 Real-Time PCR System (Foster City, CA, USA). Data were normalized to Rpl19 RNA or 18S rRNA. Western-blots were detected using the LI-COR Odyssey scanner (Li-Cor Biosciences, Lincoln, NE, USA). The antibodies used were β-actin (sc-47778) from Santa Cruz Biotechnology (Dallas, TX, USA); PKM2 (ab137791) from Abcam (Cambridge, MA, USA); p62 (NBP1–49956) from Novus Biologicals(Littleton, CO, USA); p-p62-S349 (#95697), Nrf2 (#12721), p-mTOR-S2448 (#5536), mTOR (#2983), p-4EBP-T37/46 (#2855), 4EBP (#9644), Dvl3 (#3218), non-phospho (active) β-catenin-S33/S37/T41 (#8814), YAP (#12395), p-YAP-S127 (#13008) from Cell Signaling Technology (Danvers, MA, USA).
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4

Callyspongiolide Synthesis and Analysis

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pH Pharma acquired an exclusive license from Purdue Research Foundation and synthesized Callyspongiolide at Chem-veda. The primary antibodies of mTOR, p-mTOR s2448, AMPK, p-AMPK, AKT, p-AKT, p-4E-BP t37/46, p-4E-BP t70, 4E-BP, BNIP3, NDP52, parkin, HIF1A, and GAPDH were purchased from Cell Signaling Technology. The primary antibodies of p62 were purchased from BD Biosciences, LC3 from Medical & Biological Laboratories, OXPHOS cocktail, and LAMP2 from Abcam, and β-actin from Santa Cruz Biotechnology.
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