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6 protocols using aβ peptide

1

Amyloid-beta Peptide Aggregation Kinetics

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Aβ peptides (AnaSpec, Fremont, CA, USA) were dissolved at a concentration of 1 mg/mL in hexafluoroisopropanol (HFIP). Peptides were then mixed at different molar ratios. HFIP was evaporated in a SpeedVac without heating for 15 min. Peptides and mixtures were kept on ice and reconstituted in 50 mM Tris–HCl, 1 mM EDTA. Peptides (final concentration: 10 μM) were added to thioflavin T (final concentration: 2.5 μM; AnaSpec) in a black 96-well plate. Aggregation was monitored on a SpectraMax M5 plate reader (Molecular Devices, Inc.) at a constant temperature of 25 °C using excitation/emission of 440 nm/480 nm. Readings were recorded in triplicate every 10 min for a period of 18 h.
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2

Preparation of Amyloid-Beta Peptides

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All Aβ peptides were purchased from AnaSpec (CA, USA), with a purity of ≥95% as analyzed by% peak area by HPLC. To ensure the monomeric state of the peptide, it was dissolved in high-grade 1,1,1,3,3,3-hexafluoroisopropanol (HFIP), vortexed, and incubated at room temperature for 2 h. Aβ was then dried under a slow stream of Ar(g) and for an additional 1 h in a high vacuum to remove access HFIP. The obtained film was dissolved in 10 mM NaOH102 (link) (10 mM NaOH, pH ∼ 10.5–11, pI of Aβ = pH 5.2,103 (link) or dimethyl sulfoxide (DMSO), and its concentration was determined by UV absorption using the theoretical molar extinction coefficient ε(214 nm)Aβ1–42 = 76848 M-1 cm-1104 (link),105 (link) on a JASCOV-670 spectrophotometer. Similarly, scrambled Aβ42 HiLyte 555 Aβ42, and HiLyte Flour 488 Aβ42 were prepared (AnaSpec).
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3

Aβ Fibrillization and Cell Treatment

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Aβ peptides in powder form (Anaspec) were initially resuspended in 1% NH4OH for 15min to dissolve any pre-formed aggregates per manufacturer instructions, and then diluted to a final concentration of 0.05% NH4OH in water prior to fibrillization. Aβ peptides were converted to the fibrillar form of Aβ by incubating monomeric human Aβ(1-42) (cat. no: AS-20276) or human Hilyte Fluor 555 labeled Aβ(1-42) (cat. no: AS-60480-01) at 220μM in water at 37°C for 3days prior to use as previously described (34 (link)). Hilyte Fluor is more photostable than the classic fluorescent dyes. They are also highly fluorescent over a broad pH range with little pH sensitivity (Anaspec). Treatment with 1µM Aβ was completed in serum free media for 1h before washing away excess Aβ and adding full media.
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4

Amyloid-beta Solubilization and Neuronal Exposure

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Amyloid-beta (Aβ) peptides were purchased from AnaSpec and solubilized in a manner analogous to previous protocols (Stine et al., 2003) . Briefly, lyophilized peptides were dissolved in 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) to generate a 1 mM solution. The Aβ-HFIP solution was aliquoted into PCR tubes and evaporated to dryness by placing the open PCR tubes in a chemical fume hood overnight followed by further concentration on a vacuum concentrator. The dried peptide aliquots were then stored over desiccant in glass jars at -20 °C.
Before addition to the cultures, the dried peptides were re-dissolved to 1 mM in DMSO, vortexed, and sonicated for 10 minutes. Further dilutions were made with DMSO to 50-500 μM. At 8 DIV, the DMSO stocks were diluted 1:500 in fresh Neurobasal media containing 2% B-27 supplement and 1% GlutaMax (NB++). The Aβ-NB++ solutions were then added to an equal amount of conditioned media on the coverslips to give a total dilution of 1:1000 for Aβ:Media. The cultures were grown in the Aβ-NB++ solution for 7 days and loaded with dye and imaged at 15 DIV. For vehicle controls, an equal amount of DMSO containing no Aβ was added to the NB++.
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5

Amyloid Inhibition Assay with AChE

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Recombinant human AChE (2419 U mg−1), expressed in human embryonic kidney (HEK) 293 cells, lyophilised powder (E.C. No. 3.1.1.7), equine BuChE (≥500 U mg−1), acetylthiocholine (ATC) iodide, butyrylthiocholine (BTC) iodide, 5,5′-dithiobis(2-nitrobenzoic acid) (DTNB), donepezil, tacrine hydrochloride (A79922), propidium iodide (P4170), dimethyl sulfoxide (DMSO), methanol (MeOH) and ethanol (EtOH), di-sodium hydrogen orthophosphate dodecahydrate (Na2HPO4·12H2O), sodium dihydrogen orthophosphate (NaH2PO4·2H2O), sodium hydroxide (NaOH), thioflavin T, glycine, and hydrochloric acid (HCl) 37% were purchased from Sigma-Aldrich (St. Louis, MO, USA). β-Amyloid (Aβ) peptide (1–40) and Aβ peptide (1–42), lyophilised from HFIP solution were purchased from Anaspec (Fremont, CA, USA). The chemicals were of analytical grade. Instruments used included a UV/fluorescence spectrophotometer and multiplate reader, Infinite® M200 PRO multimode reader (Tecan Group Ltd., Männedorf, Switzerland), workstation and molecular modelling software.
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6

Fluorescent Amyloid-Beta Nanoparticle Synthesis

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Tetraethyl orthosilicate, poly(N-isopropylacrylamide), ammonium hydroxide, dimethyl formamide (DMF), fluorescein isothiocyanate (FITC), Tween 20, 3-aminopropyl triethoxy silane (Sigma-Aldrich, St. Louis, MO), Calcein AM (CAM) (MilliporeSigma, Burlington, MA), polystyrene (PS) spheres (PolySciences, Warrington, PA), 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), rhodamine-labeled 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine (Rh-PE) (Avanti Polar Lipids, Alabaster, AL), Opti-MEM (OM) reduced serum media, phosphate saline buffer (PBS), Thioflavin T (ThT) (Thermo Fisher Scientific, Waltham, MA), cell culture slides (MatTek, Ashland, MA), Aβ peptide (AnaSpec, Fremont, CA), biotinylated Aβ antibody (Mabtech, Stockholm, Sweden), MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) (Abcam, Cambridge, UK), and Cell Fractionation Kit by Cell Signaling Technology (Danvers, MA) were used.
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