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5 protocols using anti oga

1

Quantification of O-GlcNAc Levels in Proteins

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Forty micrograms of cell proteins were separated by SDS electrophoresis under denaturating conditions using 6–10% polyacrylamide gels. SDS-PAGE gels were electrophoretically transferred on PVDF membrane in Tris-glicine buffer, using the Mini Transblot System (Bio-Rad Laboratories, Richmond, VA). O-GlcNAc levels were measured by anti-b-O-linked N-Acetylglucosamine (OGlcNAc) CTD 110.6, an antibody that specifically recognizes endogenous levels of O-GlcNAc, linked to both serine and threonine residues of proteins, 1:1000 dilution (Cell Signaling). Other primary antibodies were used as follows: anti-OGA 1:3000 dilution (Sigma-Aldrich), anti-OGT 1:500 dilution (Sigma–Aldrich), and anti-Histone H3 1:2000 dilution (Cell Signaling).
Each membrane was washed three times for 10 min and then incubated with the appropriate secondary antibody conjugated with horseradish peroxidase (Santa Cruz Biotechnology) for 1 h. For the immunological detection of proteins, MINI HD 9 System (Uvitec Limited, Cambridge UK) was used. Band density was quantified Quantity One Software (Bio-Rad Laboratories).
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2

Standardized Molecular Analyses of OGT and OGA

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Standard molecular procedures for RNA analyses, western blotting, and plasmid construction are described in the Supplemental Experimental Procedures. Oligonucleotides are listed in Table S1. Antibodies used were: anti-OGT (Sigma, O6264), anti-OGA (Sigma, SAB4200267), anti-O-GlcNAc (CTD110.6; Santa Cruz Biotechnologies, SC-59623 or RL-2; Thermo Fisher Scientific, MA1-072), and/or anti-β-actin (Abcam, ab6276). IRDye-680 or -800 conjugated secondary antibodies (LI-COR Bioscience) and HRP conjugated anti mouse IgM antibody (CTD110.6 only) were used to visualize the detected protein bands through an Odyssey Fc Imaging System and quantitative analyses were performed using ImageStudio software (LI-COR Bioscience).
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3

Quantifying O-GlcNAcylation Proteins in Adipose Tissue

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PVAT from thoracic aorta and visceral adipose tissue from humans were frozen in liquid nitrogen and homogenized in a lysis buffer [50 mM Tris/HCl, 150 mM NaCl, 1% Nonidet P40, 1 mM EDTA, 1 μg/ml leupeptin, 1 μg/ml pepstatin, 1 μg/ml aprotinin, 1 mM sodium orthovanadate, 1 mM phenylmethanesulfonyl fluoride (PMSF), and 1 mM sodium fluoride]. The tissue extracts were centrifuged, and total protein content was quantified using the Bradford method (Bradford, 1976 (link)). Proteins (20 μg) were separated by electrophoresis on 10% polyacrylamide gel, and transferred on to nitrocellulose membranes. Non-specific binding sites were blocked with 5% bovine serum albumin (BSA) in Tris buffered saline (TBS) containing 0.1% Tween 20 (for 1 h at 24°C). Membranes were incubated with antibodies (at the indicated dilutions) overnight at 4°C. Antibodies were used as follows: anti-Anti-β-O-Linked N-Acetylglucosamine (1:5000 dilution; Sigma-Aldrich Inc., Germany), anti-OGA (1:1000 dilution; Sigma-Aldrich Inc., Germany), anti-OGT (1:1000 dilution; Abcam, UK), anti-GAPDH (1:10000 dilution; Sigma-Aldrich Inc., Germany). After incubation with secondary antibodies, signals were obtained by chemiluminescence and quantified densitometrically.
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4

Standardized Molecular Analyses of OGT and OGA

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Standard molecular procedures for RNA analyses, western blotting, and plasmid construction are described in the Supplemental Experimental Procedures. Oligonucleotides are listed in Table S1. Antibodies used were: anti-OGT (Sigma, O6264), anti-OGA (Sigma, SAB4200267), anti-O-GlcNAc (CTD110.6; Santa Cruz Biotechnologies, SC-59623 or RL-2; Thermo Fisher Scientific, MA1-072), and/or anti-β-actin (Abcam, ab6276). IRDye-680 or -800 conjugated secondary antibodies (LI-COR Bioscience) and HRP conjugated anti mouse IgM antibody (CTD110.6 only) were used to visualize the detected protein bands through an Odyssey Fc Imaging System and quantitative analyses were performed using ImageStudio software (LI-COR Bioscience).
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5

Analysis of OGA and c-Fos Interaction

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For analyzing OGA and c‐Fos interaction, we performed immunocytochemistry as previously described (Kim et al., 2012). Briefly, EGFP‐c‐Fos‐WT transfected cells were plated on coverslips and treated by Aβ. After fixed by 4% paraformaldehyde (BIOSESANG, Inc., Korea), cells were incubated with anti‐OGA (Sigma, USA) and GFP (OSE00001G, Osenses, Australia) antibodies, which were diluted in 0.5% Tx‐100, 1% goat serum in PBS, overnight at 4°C. After labeling with fluorescent‐labeled secondary antibodies (Invitrogen, USA) for 1 hr at room temperature, cells were imaged by SIM (Nikon N‐SIM, Nikon Instruments, Inc., Japan). Images were processed and analyzed by NIS‐E software (Nikon Instruments, Inc., Japan). For imaging c‐Fos level, native EGFP signals were imaged by confocal microscopy (Olympus FV10i; Olympus, Japan and LSM710; Carl Zeiss, Germany) in living cells which were transfected by EGFP‐c‐Fos‐WT and treated by CHX or MG132.
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