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12 protocols using annexin v 7aad apoptosis kit

1

Dissecting WNT Signaling in Colon Cancer Spheroids

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For apoptosis studies, CCD-18Co cells were infected with lentivirus expressing shRNAs to either WNT2 or WNT5A or a non-targeting control shRNA, stained with a far-red tracking dye and mixed in a 50:1 ratio with HCT116-eGFP cells as previously described. After 72 hours of spheroid formation, spheroids were dissociated using non-enzymatic cell dissociation buffer (Gibco), stained with the Annexin-V/7-AAD Apoptosis kit (BD Biosciences) and subjected to flow cytometric analysis on a FACSCalibur (BD Biosciences). Cell quantitation was performed using FlowJo V10 software.
For WNT reporter studies, HCT116 cells were engineered to express a Super-Topflash (STF) luciferase reporter which is activated by the β-catenin-T-cell factor (TCF) transcriptional complex and is responsive to WNT signaling [52 (link)]. HCT116-STF cells were grown as monoculture spheroids or co-culture spheroids with CCD-18Co colon fibroblast cells. Spheroids were formed for 72 hours before treatment. Treatments included rhWnt5a protein (RnD Systems) at 25 nM or the porcupine inhibitor GNF-1331 at 100 nM. After 24 hours of treatment, spheroids were subjected to a Brite-Glo assay (Promega) according to the manufacturers’ instructions.
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2

Quantifying Tumor Cell Death and Immunogenic Markers

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mFX and/or radiation-induced tumor cell death was assessed using Annexin V-7AAD apoptosis kit (BD Biosciences, San Diego, CA) according to the manufacturer’s instructions. As previously described (25 (link)), cell surface calreticulin or ERp57 was detected by staining of anti-calreticulin antibody (1:1000, ab4109, Abcam) or anti-ERp57 antibody (1:1000, ab10287, Abcam) for 30 min at 4 °C in the dark. Cells were washed with PBS containing 5% FBS, followed by AF488-labeled 2nd antibody for 30 min at 4 °C in the dark. Cells were washed again with PBS containing 5% FBS, and analyzed by flow cytometry. Cell culture supernatant was assayed for extracellular HMGB1 by ELISA (Fisher Scientific) according to the manufacturer’s instructions.
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3

Immune Cell Profiling by Flow Cytometry

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PE-conjugated anti-mouse CD206 (Clone M1), PE-conjugated anti-mouse MHCII, PE-conjugated anti-mouse PDL1, PerCP-conjugated anti-mouse CD40, PE-Cy7-conjugated anti-mouse CD86, PE-conjugated anti-mouse CD80 and corresponding isotype controls were purchased from BD Pharmingen (San Diego, CA). Penicillin and streptomycin, DCFH-DA probe, HRP-conjugated goat anti-mouse IgG (H + L) are from Beytotime (Haimen, Jiangsu, China). Annexin V/7-AAD apoptosis kit was purchased from BD Pharmingen (San Diego, CA). Alexa Fluor® 647 AffiniPure F(ab′)2 Fragment Rabbit Anti-Mouse IgG (H + L) was purchased from Jackson Immunoresearch (West Grove, PA, USA). Matrigel was purchased from Sigma (St. Louis, MO).
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Isolation and Characterization of Hematopoietic Stem Cells

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HSPC were sorted from mouse BM based on surface expression of c-Kit, Sca-1, and low to negative expression of lineage markers (lin-). KSL CD34- were used in reconstitution experiment as described.50 (link) All antibodies were purchased from BD Biosciences, BioLegend (San Diego, CA, USA) or eBioscience (Waltham, MA, USA). Annexin-V/7AAD apoptosis kit was from BD Biosciences. The cell sorting and analyses were performed on a FACSVantage cell sorter or CANTO analyzer (Becton Dickinson, Franklin Lakes, NJ, USA).
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5

Apoptosis and Mitochondrial Membrane Potential in Prostate Cancer Cells

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Effect of ORM treatment on apoptosis induction in PrCa cells, was analyzed using Annexin V-7AAD apoptosis kit (BD Biosciences, San Diego, CA) as described (15 (link)). In brief, PC3 and DU145 cells (200,000 cells per well) were plated in 6-well plates and allowed to attach overnight. Next day, cells were treated with ORM (10–20 μM) concentrations for 24 hrs. Both floating and adherent cells were collected, washed twice with cold PBS and stained with Annexin V-7AAD (5μL) each/100μL of cell suspension for 20 min in dark at room temperature. Number of apoptotic cells were analyzed by setting FL2 (Annexin V) and FL3 (7AAD) channels in BD Accuri™ flow cytometer (BD Biosciences). To analyze the effect of ORM on mitochondrial membrane potential (Δѱm), we utilized Tetramethyl rhodamine ethyl ester (TMRE) as described (12 (link)).
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6

Cell Cycle and Apoptosis Analysis of VERU-111

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For cell cycle analysis, cells were exposed to different concentrations of VERU-111 at (0– 50 nM) for 24 h. Samples were analyzed with Accuri C6 (BD Biosciences) flow cytometer in the FL2 channel as described [25 (link)]. Further, the Annexin V-7AAD apoptosis kit (BD Biosciences, San Diego, CA,USA) was utilized to determine VERU-111’s ability to induce apoptosis in cervical cancer cells as described [25 (link)]. To analyze the effect of VERU-111 on mitochondrial membrane potential (ΔΨM), Tetramethyl rhodamine ethyl ester (TMRE) (Invitrogen) stain method was employed as described [27 ].
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7

Proliferation and Apoptosis Assay Protocol

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For proliferation index, cells were labeled with 5 μM of CellTrace Violet (Life Technologies), seeded and allowed to proliferate for 72, 96 and 120 h and analyzed using flow cytometry. CellTrace Violet data were normalized to controls arrested at the parent generation with 1 μg/ml mitomycin C (t=0 h) and proliferation index was calculated using ModFit LT software (Verity Software House, Topsham, ME, USA). For evaluation of cell death, cells were serum-deprived for 48 h and analyzed with an Annexin V/7-AAD apoptosis kit (BD Biosciences, San Diego, CA, USA). Cytometric analysis was performed with FACS-Canto II (Becton Dickinson, Franklin Lakes, NJ, USA).
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8

Niclosamide Induces Apoptosis in MC3T3-E1 Cells

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We used an Annexin V/7-AAD apoptosis kit (BD Biosciences, San Jose, CA, USA) to assess apoptosis according to the manufacturer. Briefly, the mouse calvaria-origin cell line MC3T3-E1 (ATCC, USA) seeded in 24-well plates in osteoblast differentiation medium with or without various concentration of niclosamide (0, 0.25, 0.5 and 1µM) for 4 days and collected by trypsinization. Cells were resuspended in 400 µl ice-cold 1X binding buffer at a density of nearly 1×106 cells/ml, and then incubated with 10 µl Annexin V-PE/7-AAD for 10 min at room temperature in the dark. The AnnexinV-PE and 7-ADD-labelled cells were analyzed by a flow cytometer. The data was analyzed using WinMDI software.
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9

Profiling Immune Cell Responses to Stimuli

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Lipopolysaccharide (LPS), lectin from Phaseolus vulgaris (PHA), Brefeldin A, Saponin, and carboxyfluorescein diacetate N-succinimidyl ester (CFSE) were from Sigma-Aldrich Co., St Louis, MO, USA. Paraformaldehyde was from Carl Roth GmbH + Co. KG (Karlsruhe, Germany). Recombinant human macrophage colony stimulating factor (rhM-CSF) was from ImmunoTools GmbH (Friesoythe, Germany).
For flow cytometry, Privigen® human immunoglobulin from CSL Bhering, (King of Prussia, PA, USA) was used. Anti-human-IL1β-PE, anti-human-CD3-Pacific-blue, anti-human-CD14-APC-Cy7, anti-human-CD19-PE-Cy7, and Annexin V/7AAD apoptosis kit were from BD Biosciences (San Jose, CA, USA) and anti-human-CD15-APC was from Miltenyi Biotech GmbH (Bergisch Gladbach, Germany).
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10

Apoptosis Assay of Human Cardiomyocytes

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The apoptosis of HCMs was examined by using an Annexin V/7 AAD apoptosis kit (BD Biosciences, USA). Briefly, HCMs were collected, washed with PBS, and resuspended in 100 μL binding buffer. Then, the cells were incubated with Annexin V and 7-AAD in the dark at 4°C for 1 h. The stained cells were washed with PBS and analyzed using the FACSCalibur System (Becton-Dickinson) for flow cytometry. The proportion of positively stained cells was calculated to determine the apoptosis ratio.
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