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6 protocols using ab207299

1

Immunohistochemical Analysis of Biomarkers

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Standard streptavidin-peroxidase immunohisto-chemistry procedures were performed following the manufacturer's instructions with an UltraSensitive TM SP Kit (Maixin-Bio, Fujian, China) as previously described [36 (link)]. Primary antibodies against PLCD1 (ab134936; Abcam), MMP7 (ab207299; Abcam), pERK1/2 (#4370; Cell Signaling Technology), or active-β-catenin (05-665; Millipore) were employed, and PBS was used as a negative control. All immunohistochemical images were subjected to mean optical density (OD) measurement using Image Pro Plus (IPP, version 6.0; Media Cybernetics, Silver Spring, MD, USA).
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2

Protein Expression Analysis Protocol

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RIPA lysis buffer (Beyotime, PRC) was adopted to abstract the overall proteins as per supplier's guideline. Immunoblotting was used to identify the protein expressing levels herein as per the guideline provided in the previous study. Primary antibodies against TMEM206 (1 : 300, ab99055, Abcam, MA, USA), β-catenin (1 : 200, ab32572, Abcam), c-Myc (1 : 500, ab32072, Abcam), CyclinD1 (1 : 400, ab16663, Abcam), MMP7 (1 : 400, ab207299, Abcam), MMP9 (1 : 200, ab76003, Abcam), and GAPDH (1 : 500, ab9485, Abcam) were purchased as primary antibodies. HRP-predicted sheep anti-rabbit second antisubstances (1 : 5000) were acquired as well. Eventually, the visualization of the protein bands were realized via an ECL system, and grayscale results were determined via Image J soft.
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3

Western Blot Analysis of Cellular Proteins

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After harvest, cells were lysed in 20 mmol/L Tris-HCl (pH 7.5) plus protease inhibitor (Solarbio). The extract was centrifuged at 4° for 20 min at 16,000 g. Protein concentration in the supernatant was determined by bicinchoninic acid (BCA) method. The samples were separated by SDS-PAGE. Afterwards, the separated protein was then transferred onto nitrocellulose (NC) membrane. Non-specific binding sites were blocked with 5% skim milk. The membrane was probed with primary and secondary antibodies and then visualized with enhanced chemiluminescence (ECL) reagent. β-actin was used as the internal reference, and the relative expression level of the target protein was presented as gray value of test band/gray value of the β-actin band. Primary antibodies of HMGB3 (ab18256), Caspase 3 (ab32351), Caspase 9 (ab138412), E-cadherin (ab231303), B-cell lymphoma-2 (Bcl-2) (ab182858), BCL2-Associated X (Bax) (ab32503), N-cadherin (ab76011), β-catenin (ab32572), c-myc (ab32072), Matrix metalloproteinase 7 (MMP7) (ab207299), β-actin (ab8226), and secondary antibody (HRP conjugate) were all purchased from Abcam.
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4

Western Blot Analysis of Signaling Proteins

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Cells were washed twice with cold 1×PBS, and total lysates were extracted with RIPA lysis buffer (Beyotime Institute of Biotechnology, Shanghai, China) containing protease inhibitor cocktail (Pierce, Cramlington, UK) with mixing by sonication. The lysate concentration was measured using a bicinchoninic acid (BCA) standard curve. Lysates (40μg) were heated at 95°C for 5 min and separated by 10–12% sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE). After transferring onto polyvinylidene fluoride (PVDF) membranes and blocking with 5% milk, membranes were incubated with primary antibodies against PLCD1 (ab134936), MMP7 (ab207299; Abcam, Cambridge, MA, USA), KIF3A (#8507S), ERK1/2 (#4695), pERK1/2 (#4370), β-catenin (#8480), GSK-3β (#9315), pGSK-3β (#9323), β-actin (#4970; Cell Signaling Technology, Danvers, MA, USA), or active-β-catenin (05-665; Merck Millipore, Billerica, MA, USA) overnight, followed by secondary antibodies (1:5000 dilution, Cell Signaling Technology). Membranes were visualized using ECL Plus Detection Reagents (RPN2132, GE Healthcare Life Science, Amersham, UK).
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5

Western Blot Analysis of Signaling Proteins

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The preparation of whole-cell extracts and western blot analysis were performed as previously described [4 (link)]. The proteins were determined using antibodies against MMP-7 (ab207299, Abcam, Cambridge, UK), MMP-10 (ab38930, Abcam), p-PI3K (#4228S, Cell Signaling Technology, Danvers, MA, USA), PI3K (#4292S, Cell Signaling Technology), p-AKT (#9271S, Cell Signaling Technology), AKT (#9272S, Cell Signaling Technology), p-mTOR (#5536S, Cell Signaling Technology), mTOR (#2972S, Cell Signaling Technology), IκBα (sc-371, Santa Cruz Biotechnology, Dallas, TX, USA), Snail (#3879, Cell Signaling Technology), and actin (sc-47778, Santa Cruz Biotechnology). After detection with the secondary antibodies, the proteins were determined using an enhanced chemiluminescence detection system. Actin served as a loading control. Densitometry data represent the mean ± standard error (SE) from three immunoblots and are shown as the relative density of protein bands normalized to the indicated protein (actin or total form of PI3K/AKT/mTOR).
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6

Western Blot Analysis of HCC Proteins

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Different groups of HCC cells were lysed on ice with RIPA buffer. Then, protein lysates were electrophoresed on 10% SDS polyacrylamide gels, transferred onto PVDF membranes (Millipore, USA), and blocked with 5% skim milk. Afterwards, primary antibodies: anti-RTKN2 (Abcam, #ab251807, 1:1000), anti-β-catenin (Abcam, #ab16051, 1:1000), anti-PCNA (Abcam, #ab29, 1:1000), anti-CyclinD1 (Abcam, #ab134175, 1:1000), anti-c-Myc (Abcam, # ab32072, 1:1000), anti-Bcl-2 (Abcam, # ab185002, 1:1000), anti-Bax (Abcam, # ab32503, 1:1000), anti-MMP-7 (Abcam, # ab207299, 1:1000), anti-E-cadherin (Abcam, #ab1416, 1:500), anti-N-cadherin (Abcam, #ab76057, 1:1000) were added at 4 °C overnight. Subsequently, secondary antibodies (1:1,000; Millipore, USA) was incubated for 1 h. Data was obtained and calculated using ImageJ software.
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