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8 protocols using mouse cd11c microbeads ultrapure

1

Differentiation of Murine Macrophages and Dendritic Cells

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Bone marrow cells were collected from mouse tibia and femur. Cells were passed through 70-micron cell strainer and subsequently cultured 10mL complete RPMI media supplemented with 20 ng/mL of recombinant murine M-CSF (576406; BioLegend, 315-02 PeproTech). On day 3, additional 5 ml of the complete media was added. On day 7, media was replaced. BMDMs were harvested on day 10 using cell stripper solution for further experiments. Dendritic cells were isolated from the spleens of wildtype, using mouse CD11c UltraPure MicroBeads (130-125-835; Miltenyi Biotec) according to the manufacturer’s instructions) and cultured in RPMI medium supplemented with 10% heat-inactivated charcoal-stripped FBS, 50 µM β-mercaptoethanol, 1% sodium pyruvate, 1% nonessential amino acids, % penicillin/ streptomycin, and 1% Glutamax.
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2

Isolation of Murine Splenic Immune Cells

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To isolate splenic immune cells, murine spleens were cut into small pieces and digested with 0.1 mg/mL collagenase D (Sigma-Aldrich, 11088866001) and 0.05 mg/mL DNase (Sigma-Aldrich, D5025-150KU) for 10 minutes at 37 C. EDTA (Applichem, A4892.1000) was added at a concentration of 0.01 mol/L, followed by a second incubation step at 37 C for 5 minutes. The splenocytes solution was smashed through a 70-mm cell strainer (Corning, 431751). Red blood cells were lysed with cell lysis buffer (BD, 555899). Mouse CD11c UltraPure microbeads (Miltenyi Biotec, 130-108-338), mouse CD8a þ T Cell Isolation Kit (Miltenyi Biotec, 130-104-075) or the Mouse B Cell Isolation Kit (Miltenyi Biotec, 130-090-862) were used according to the manufacturer's instructions to isolate different immune cell populations from the splenocytes suspension. For subsequent in vitro assays with splenic immune cells, cells were resuspended in R10 (RPMI1640; Gibco, 31870-025) supplied with 10% FBS (Gibco, 16140), 1% penicillin-streptomycin (P/S; Gibco, 11548876), 1% L- glutamine (Gibco, 25030-024), 1% sodium-pyruvate (Gibco, 11360-039), 1% nonessential amino acids (Gibco, 11140-035), and 50 mmol/L b-Mercaptoethanol (Gibco, 31350-010).
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3

Lipid-Based Immune Modulation Protocol

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Brain PS, 18:1 PS, 18:1 Lyso-PS and 1,2-dimyrisotyl-sn-glycero-3-phosphocholine (DMPC) were purchased from Avanti Polar Lipids (Alabaster, AL). All recombinant FVIII products were generous gifts from the Western New York BloodCare (Buffalo, NY). Endograde Ovalbumin was purchased from BioVendor LLC (Asheville, NC) and GAA was purchased from Creative Biomart Inc (Shirley, NY). All solvents and buffer salts were obtained from Fisher Scientific (Fairlawn, NJ). PSvue 550 and ICG was obtained from Molecular Targeting Technologies, Inc. (West Chester, PA) and MP Biomedicals (Santa Ana, CA), respectively. Mouse CD11c MicroBeads UltraPure and CD4+ T Cell Isolation Kit were purchased from Miltenyi Biotec, (Bergisch Gladbach, Germany). Anti-Ovalbumin IgG1 ELISA Kit was acquired from Cayman Chemical (Ann Arbor, MI) and Endosafe Endochrome-K® Kit was purchased from Charles River Laboratories (Charleston, SC). Antibodies used in staining for flow cytometry analysis were obtained from eBioscience, Inc. (San Diego, CA), BioLegend (San Diego, CA), BD Biosciences (San Diego, CA) and Tonbo Biosciences (San Diego, CA).
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4

Isolation and Cultivation of Murine BMDCs

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THP-1 Dual cells (InvivoGen, San Diego, CA, USA) were cultured in RPMI 1640 medium (ATCC, Manassas, VA, USA) supplemented with glutamine, penicillin (100 U/mL), streptomycin (100 µg/mL), normocin (100 µg/mL), and 10% heat-inactivated fetal bovine serum. To maintain the selection pressure, blasticidin (10 µg/mL) and zeocin (100 µg/mL) were added to the growth medium every other passage.
Bone marrow cells were isolated from femurs and tibias of 8–12-week-old C57BL/6 mice and seeded in a 10-cm petri dish at a density of 2 × 106 viable cells in 10 mL RPMI 1640 medium supplemented with glutamine, penicillin (100 U/mL), streptomycin (100 µg/mL), 2-mercaptoethanol (55 µM), 10% heat-inactivated fetal bovine serum, and 20 ng/mL of murine granulocyte-macrophage colony-stimulating factor (GM-CSF, Peprotech). An additional 10 mL of fresh warm medium with GM-CSF (40 ng/mL) was added on day 3 and a half volume of fresh medium was exchanged for fresh warm medium with GM-CSF (40 ng/mL) on day 6. On day 8, non-adherent and loosely adherent cells in the culture supernatant were harvested. The percentage of CD11c+ bone marrow-derived dendritic cells (BMDCs) was approximately 70%, as determined by flow cytometry. More concentrated CD11chigh BMDCs were positively selected by mouse CD11c+ microbeads ultrapure (Miltenyi Biotec, Bergisch Gladbach, Germany).
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5

Isolation and Purification of CD11c+ DCs

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CD11c+ DCs were positively enriched from splenocytes using mouse CD11c MicroBeads UltraPure and LS separation columns (Miltenyi Biotec., San Diego, CA, USA) according to the manufacturer’s instructions. The purity of CD11c-positive DCs was above 80% after staining with FITC-conjugated mouse anti-CD11c antibody. The MFI of cells was calculated using BD Accuri™ C6 system software.
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6

CD11c+ Cell Enrichment from Lymph Nodes

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At day 10 after CpG-ODN footpad injection, single cell suspensions from draining popliteal lymph nodes were enriched for CD11c+ cells using mouse CD11c MicroBeads UltraPure according to the manufacturer's instructions (Miltenyi Biotec).
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7

Determining Dock8 Knockdown Efficiency

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To assess the knock-down efficiency of Dock8 in the T-Dock8−/− and CD11c- Dock8−/− we isolated T cells from lymph nodes and DCs from the spleen from both strains. Lymph node tissue was crushed through 70μM filters, and T cells were isolated as described above. For DC isolations, spleens were injected with 4mL of digestion buffer (RPMI supplemented with L-glutamine, penicillin-streptomycin, and 1mg/mL of collagenase II), incubated at 37°C for 15min, minced and incubated again at 37°C for 20 minutes. DCs were isolated using Mouse CD11c MicroBeads UltraPure (Miltenyi Biotec). To assess the knock-down efficiency of Dock8 in the tamoxifen-treated CX3CR1- Dock8−/− mice, we isolated monocytes from bone marrow one week after the first three consecutive treatments with 5mg of Tamoxifen (described above). RNA was extracted using the TRIzol Plus RNA Purification Kit (Applied Biosystems). For Dock8 and GAPDH expression, previously published primers were used93 (link).
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8

Isolation and Maintenance of Immune Cells in Mice

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Eighteen-month-old (aged) female C57BL/6 mice were maintained at the Laboratory Animal Resource Center of the Korea Research Institute of Bioscience and Biotechnology (KRIBB). Six-week-old female C57BL/6 mice and OT-I transgenic mice were purchased from OrientBio (Gyeonggido, Republic of Korea) and Jackson Laboratory (ME, USA), respectively. All animal experiments were approved by the Institutional Animal Care and Use Committee (IACUC) of KRIBB (Approval number: KRIBB-AEC-20042) and performed under the guidelines in a specific pathogen-free facility. Splenocytes were cultured in the RPMI 1640 medium with 10% heat-inactivated fetal bovine serum (FBS), 100 U/mL penicillin, and 100 mg/mL streptomycin (Gibco, NY, USA). Splenic DCs were isolated using mouse CD11c MicroBeads UltraPure (Miltenyi Biotec, Bergisch Gladbach, Germany), and the purity was > 80%. Madin-Darby canine kidney (MDCK) cells (ATCC, VA, USA) were maintained in EMEM medium (Lonza, MD, USA) supplemented with 5% heat-inactivated FBS, 1% MEM vitamin solution (Sigma-Aldrich Chemical Co., MO, USA), 100 U/mL penicillin, and 100 mg/mL streptomycin (Gibco).
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