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Benchtop freeze dryer

Manufactured by Labconco
Sourced in United States

The Benchtop Freeze Dryer is a laboratory equipment designed for the lyophilization, or freeze-drying, of samples. It provides a controlled environment for the removal of water or other solvents from materials through a process of sublimation, where the frozen solvent transitions directly from a solid to a vapor phase.

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17 protocols using benchtop freeze dryer

1

Antimicrobial Screening of Diverse Plants

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The 14 plant species analyzed in the antimicrobial portion of this study are included in Table 1. The Sphagnum collection site and collection procedure are described above. Medicinal plants were obtained as dry, loose leaf from the Tucson Herb Store; seed from Food Conspiracy Coop; dry, loose leaf from Hippie Gypsy; and live, dry, or powder from distributors on Amazon (JMBamboo, Bixa Botanical, Kart It). Creosote and controls (i.e., plants that were randomly collected and may not specifically have antimicrobial compounds) were collected from five locations on the University of Arizona campus in 15 ml sterile tubes. In preparation for organic matter metabolite extraction, triplicates of all plant samples were lyophilized using a Labconco FreeZone, Benchtop freeze dryer for 24 hr to remove moisture from samples and ensure moisture homogeneity between plant species for starting weight and extraction.
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2

Intervertebral Disc Tissue Analysis

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Post mechanical‐testing, whole IVDs (encompassing the NP and AF regions) were dissected, and their wet weights were measured (Figure S6D). Subsequently, the NP and AF regions were separated, and individual wet weights of each region were measured (Figure S6E,F). Samples were then stored at −80°C until lyophilization. Samples were lyophilized for 48 h using a benchtop freeze dryer (Labconco), and dry weights of separated NP and AF regions were measured. Tissue water content (%) was calculated based on the weights ((wet weight − dry weight)/wet weight). Samples were then digested in Papain (0.02% [v/v], P3125, Sigma‐Aldrich) in a pH = 6.0 digest buffer (sodium acetate anhydrous) (S2889, Sigma‐Aldrich), cysteine hydrochloric acid (HCl) (C9768, Sigma‐Aldrich), ethylenediaminetetraacetic acid (EDTA) (E6758, Sigma‐Aldrich) in a 60°C water bath for 24 h. Quantification of DNA, GAG, and COL content from the tissue digests was measured using PicoGreen dsDNA Assay Kit (P11496, ThermoFisher), DMMB, and orthohydroxyproline (OHP) assay with a 1:7.64 OHP‐to‐collagen mass ratio,
33 (link) respectively. DNA content was measured to assess the cellular content of the treated groups versus controls. Furthermore, DNA content was used to normalize GAG and collagen content to inform differences observed with cellular density or activity.
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3

PLGA Nanoparticles for Peptide Nucleic Acid Encapsulation

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Based on prior protocols, a double emulsion solvent evaporation technique was used for formulation of PLGA nanoparticles [58 (link)]. Dichloromethane (DCM) was used to dissolve the polymer and PNAs were used at 2 nanomole/mg of polymer for encapsulation. PNA dissolved in water was added to the DCM containing polymer and ultrasonicated to form the first emulsion (w/o), which was then added to the 1 ml of polyvinyl alcohol (5% w/v, aqueous) followed by ultrasonication to form the double emulsion (w/o/w). The final emulsion was added to 10 ml of 0.3% aqueous polyvinyl alcohol and stirred overnight. Nanoparticles were washed with cold water three times to remove excess PNA or polyvinyl alcohol. The final nanoparticle pellet was resuspended in 5% (w/v, aqueous) trehalose and lyophilized overnight using the benchtop freeze dryer (Labconco). Nanoparticles obtained were weighed and covered with parafilm, followed by storage at −20°C.
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4

Rabies Virus Inactivation and Lyophilization

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We used β-propiolactone (BPL, Sigma-Aldrich, St. Louis, MO, USA) for RABV inactivation. In brief, BPL was diluted in a chemical hood using cold, sterile water to 10% (v/v), and added to RABV ERA-2GnRH (4.0 × 108 ffu/mL) to a final concentration of 0.04% (v/v). After incubation on ice for 18 h, the virus solution was further incubated in a water bath at 37 °C for 2 h. The BPL-killed virus was used immediately for lyophilization, or stored at −80 °C. For lyophilization of inactivated ERA-2GnRH virus, a benchtop freeze dryer from Labconco was used (Labconco, Fort Scott, KS, USA). One part stabilizer BSA at 10% (Sigma-Aldrich, St. Louis, MO, USA) was added to 19 parts of ERA-2GnRH, and the formula was divided into 2 mL aliquots per 5 mL vial, and was freeze-dried O/N according to the manufacturer’s program. The dry vaccine was capped under vacuum and stored at −80 °C.
For vaccine formulation in hydrogel, first a 1.2% chitosan solution in 0.1 M HCl was prepared using low molecular weight chitosan (Sigma-Aldrich, St. Louis, MO, USA). Two vials of dry vaccine ERA-2GnRH (~ 8.0 × 108 ffu before inactivation) were loaded gradually into 8 mL of chitosan solution under magnetic stirring, making a vaccine at 1.0 × 108 ffu/mL of hydrogel. The gel vaccine was continuously stirred at 4 °C until it was administered to mice.
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5

Freeze-Drying Cell-Free Reactions

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Thirty-microliter reactions containing all components of the cell-free reaction (including lysate, small-molecule mix, DNA templates, and CPRG) at a 1× concentration were prepared in PCR tubes and flash-frozen in liquid nitrogen. Frozen samples were removed from liquid nitrogen and added to a Labconco Fast-Freeze flask that contained a small amount of liquid nitrogen. Care was taken to transfer samples quickly and keep samples cold throughout the transfer process. Flasks were connected to a Labconco benchtop freeze dryer and lyophilized at −50°C and 0.05 mbar for 3 hours. Samples were then removed and rehydrated on ice.
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6

Simulated Digestion of Hempseed Protein

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SGID was carried out on the hempseed protein samples according to Walsh et al., [36 (link)]. The samples (100 mL, 2% (w/v) protein) were incubated in a water bath (37 °C, 30 min). The pH was adjusted to pH 2 using 1 M HCl. Following addition of pepsin (2.5% (w/v) protein), gastric digestion took place for 90 min before the sample was heated to 90 °C for 20 min, deactivating the enzyme. The pH of the sample was then adjusted to pH 7.5 using 1 M NaOH. Intestinal digestion occurred with the addition of Corolase PP (1% (w/v) protein) and incubation for 150 min at 37 °C before deactivation. The pH values were kept constant throughout each digestion phase using a pH stat (Metrohm 902 Titrando pH-STAT, Herisau, Switzerland). The samples containing digested protein were then freeze-dried (Labconco benchtop freeze-dryer, Kansas City, MO, USA). Therefore, three samples were obtained from each hempseed protein extract: a sample prior to digestion, a sample that had undergone simulated gastric digestion and a sample that had undergone simulated gastric and intestinal digestion. These were subsequently characterized for their degree of hydrolysis (DH%), sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and gel-permeation high-performance liquid chromatography (GP-HPLC) profiles, in vitro antioxidant activity, and lipase-inhibitory activity.
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7

Isolation and Purification of Occidiofungin

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Isolation of occidiofungin
was performed as previously reported with some modifications.8 (link) The producing strain, B. contaminans MS14, was grown in modified minimal M9 media with the glucose carbon
source substituted for asparagine (1 g/L). The final pH of the medium
was around 6.9. A 10% inoculum with an O.D.600 between
0.6 and 0.8 was made before incubating the culture at 28 °C for
3 to 4 days. Cell free extracts of the culture were passed through
a 0.2 μm filter before preparative HPLC purification. A 5–7
mL sample containing occidiofungin (∼30 mg) in 35:65 (acetonitrile/water),
was loaded onto a SinoChrom ODS-BP 5 μm 20 × 150 mm2 column using a CHEETAH Preparative HPLC system (Bonna-Agela,
QBH P100). The mobile phase consisted of acetonitrile (A) and double-distilled
water (B), both with 0.1% formic acid. The gradient was set up as
follows: held at 5% A for 5 min, from 5% to 50% A over 11 min, held
at 50% A for 10 min, from 50% to 90% A over 10 min, and re-equilibrated
by running at 5% A for 5 min. The occidiofungin fraction eluted out
during the 50% A isocratic hold. The preparative HPLC fractions were
checked by mass spectrometry analyses before the samples were freeze-dried
on a benchtop freeze-dryer (Labconco; Kansas City MO). A stock of
occidiofungin at 1 mg/mL in 35:65 (acetonitrile:water) was prepared
for additional chromatography and mass spectrometry analyses.
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8

Extracting Active Components from Arthrocnemum macrostachyum

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Maceration was used to extract active components from dried and ground Arthrocnemum macrostachyum samples. Three grams of biomass were added to 100 ml solvent. Two solvents were used for extraction: water and aqueous 50% ethanol (v/v). The biomass and solvent were macerated for 24 h with a speed of 230 rpm using STIK rotary shaker at room temperature. After extraction, the solvent was separated from the solid biomass via vacuum filtration using Supertek 47 mm filtering glass apparatus, Grade 4. Three batches of filtrates were prepared from each crude extract. The filtrates were either dried in the oven at 40 °C (72 h for water – 60 h for aq. EtOH) or 60 °C (48 h for water – 40 h for aq. EtOH) or lyophilized using LABCONCO FreeZone 4.5 Liter (− 100 °C) Benchtop Freeze Dryer for (36 h for water and aq. EtOH). All extraction and drying steps were performed in triplicate.
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9

Phytochemical Extraction from Plant Leaves

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The plant leaves were dried at room temperature and powdered using a hammer mill (Ika Scientific, Germany) to yield approximately 2 mm mesh size powder. The leaves of each plant were soaked (1:10 w/v) in methanol, ethyl acetate, dichloromethane and distilled water respectively in 200 ml Schott Duran bottles. The bottles were placed in in mechanical shaker (IKA Scientific, Model MF 10 B, Germany) at 100 rpm for 48 h to extract the phytochemicals. The extracts were filtered through a Whatman No.1 filter paper, and then concentrated and dried using a Buchi rotoary evaporator. The water extracts were dried using a bench top freeze dryer (Labconco Corporation, Kansas City, Moussouri, USA) after being frozen at 20 °C. All the solvents used were of AR grade and obtained from Merck, South Africa.
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10

Broiler Skin Elastin Extraction

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Elastin extraction from broiler was done based on the modification of Lansing
method from Lansing et al. (1952) (link) and
Nadalian et al. (2015) .
Broiler’s skins were suspended in 1 M NaCl. The solution was put in a
cold room with constant stirring for 24 h. Then, the homogenate was centrifuged
(5804R, Eppendorf, Hamburg, Germany) at 13,000×g for 20 min. Afterwards,
the pellet was washed with distilled water and defatted with acetone for 1 h.
The treated sample then was suspended in 0.1 M NaOH and heated for 15 min in a
boiling water-bath with constant shaking. After cooling and centrifugation, the
residue was extracted again for 45 min in 0.1 M NaOH at 100°C. The
residues of NaOH-insoluble material were then washed several times in water and
lyophilized. The sample was freeze dried by using bench top freeze dryer
(Labconco, Kansas City, MO, USA) at temperature −80°C and vacuum
pressure of 4.5 Pa. Next, the powder obtained was immersed in oxalic acid,
relative to the insoluble elastin weight, at 100°C for 40 min. The
residue of insoluble elastin re-submersed for solubilizing step as water-soluble
elastin.
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