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9 protocols using cd45 clone 2d1

1

Enumeration of CD34+ Cells

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CD34 positive cell counts were determined preprocedurally in the autologous donor's peripheral blood, and in the leukapheresis product, by flow cytometry (FACS Calibur, Becton Dickinson, Heidelberg, Germany). In 48 cases, enumeration was also done in the peripheral blood 1-h after the leukapheresis procedure. Flow cytometric analysis followed the accepted protocol given by the International Society of Hematology and Graft Engineering.[16 (link)] The total leucocyte count (TLC) was done in calibrated automated cell counter (Sysmex XE 2100; Sysmex Corporation, Japan) and monoclonal CD34 antibody (clone 8G12; BD Biosciences, San Jose, US) and CD45 (clone 2D1; BD Biosciences, San Jose, USA) were used.
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2

Multi-color Immunophenotyping of Cells

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Cells were surface stained with anti-human antibodies (Abs) to CD11b (clone ICRF44), CD14 (clone TuK4), CD31 (clone M89D3), CD45 (clone 2D1), CD163 (clone GHI/61), IL-6 (clone MQ2-39C3), TNF-α (clone MAb11), vimentin (clone RV202) (BD Pharmingen, San Diego, CA), IL-8 (clone E8N1), CD326 (EpCAM, clone 9C4) (Biolegend, San Diego, CA), and CD3 (clone UCHT1, Beckman-Coulter, Miami, FL). Antibodies conjugated to the following fluorochromes were used in these studies: Fluorescein isothiocyanate (FITC), Phycoerythrin (PE), Peridinin chlorophyll protein (PerCP)-Cy5.5, PE-Cy7, Energy Coupled Dye or PE-Texas-Red conjugate (ECD), Pacific Blue, Brilliant Violet (BV) 570, BV605, BV650, Quantum dot (QD) 800, Alexa 647, allophycocyanin (APC)-Alexa 700 and APC-H7.
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3

Immunophenotyping of MSCs after Au NP Exposure

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The immunophenotype of MSCs was analyzed after exposure to 10 nM Au NPs for 48 h. According to the recommendations of the International Society for Cellular Therapy [38 (link)] the following surface markers were measured: CD14 (clone M4P9, BD Biosciences, #345785), CD19 (clone SJ25C1, BD, #332780), CD34 (clone 8G12, BD, #345801), CD45 (clone 2D1, BD, #332784), CD73 (clone AD2, BD, #550257), CD90 (clone 5E10, BD, #559869), CD105 (clone 266, BD, #32830) and HLA-DR (clone B8.12.2, Immunotech, #PNIM0463U). In brief, MSCs were stained for 15 min at 4 °C with fluorochrome-labeled monoclonal antibodies, washed with PBS, and resuspended in FACSFlow™ (BD, #342003) with 3% formaldehyde (Merck, #103999). The samples were measured with a LSRII FCM device with CellQuest Pro™ Software (both BD). Isotype-matched antibodies were used as negative controls (BD, #342409, #347221, #345818). FCS data were analyzed with FlowJo™ software version 9.5.3 (TreeStar Inc).
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4

Multicolor Flow Cytometry Immunophenotyping

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After thawing, cells were stained with directly labeled antibodies recognizing CD33 (clone P67.6; PE-conjugated), CD3 (clone SK7; PerCP-conjugated), CD45 (clone 2D1; FITC-conjugated), PD-L1 (clone MIH1, PE-conjugated), PD-L2 (clone MIH18, BV650-conjugated), CD86 (clone 2331, APC-conjugated), CD34 (clone 8G12; APC-conjugated; all from BD Biosciences) and CD80 (clone 2D10, PE-Cy7-conjugated; from BioLegend). To identify nonviable cells, samples were stained with DAPI. At least 10 000 events were acquired on an LSRII flow cytometer (BD Biosciences), and DAPI- cells were analyzed using FlowJo.
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5

Quantification of Plasma HIV RNA and T-Cell Subsets

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Plasma HIV RNA levels were quantified by an in-house real-time RT PCR using HIV Gag primers SK38/SK39 and SYBR green dyes, as in our previous studies [33 (link), 41 (link)]. The assay has a sensitivity of 150 copies HIV RNA/40μL plasma. Percentages of human CD4+ and CD8+ T cells were determined by flow cytometry analysis using fluorochrome labeled antibodies against human CD4 (clone SK3), CD8 (SK1), CD3 (clone SK7), and CD45 (clone 2D1) (BD Biosciences). Data were acquired in a BD FACSCalibur flow cytometer and analyzed using FLowJo software (v. 9.7.7). CD4/CD8 ratios were calculated and plotted using GraphPad Prism 5.0 software.
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6

Immunofluorescence Staining of Liver Cryosections

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Cryostat sections of liver lobes were prepared for immunofluorescence staining as previously described [28 (link)]. The following anti-human antibodies were used: albumin (cat# A0001 Dako) and (cat# A80–129A Bethyl), CD45 (clone 2D1 BD Biosciences), Cyp2C9 (cat#AHP617Z AbD Serotec), Cyp3A4 (cat# AHP622Z AbD Serotec). The anti-E-cadherin (clone NCH-38, Dako), and anti-Occludin-1 (clone OC-3F10 Zymed) antibodies detect human and mouse antigens. Secondary antibodies were coupled to Alexa Fluor 488, Alexa Fluor 555, or Alexa Fluor 647 (Molecular Probes), slides were mounted with SlowFade Gold antifade reagent with DAPI (Invitrogen).
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7

Whole Blood Particle Adhesion Assay

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Heparin (20 IU/ml) was added to the blood sample collected in citrate or EDTA coated tubes within 20 min of collection. Whole blood (500 µl) was plated in a 24-well plate and placed in the incubator at 37⁰C for 20 min. Polystyrene particles (500 nm) were sonicated for 5 min and then added to the cells at an approximate ratio of 1:200 (cells to particles) according to the combined theoretical neutrophil (5 million/ml) and PBMC (2 million/ml) counts in the blood. Whole blood and particle suspension was subjected to flow in the peristaltic pump at the desired flow rate for 2 hours. The cells were then collected and subjected to RBC lysis for 8 min. The cells were spun down and resuspended in flow cytometry buffer (PBS containing 1% BSA and 4mM EDTA), and were stained with antibodies against CD45 (clone 2D1, BD Biosciences, USA), CD14 (clone M5E2, BD Biosciences) and CD15 (clone HI98, BD Biosciences) for 20 min at 4⁰C. Finally, the cell suspension was stained with propidium iodide (2 µg/ml) and run on the flow cytometer. All flow cytometry data analysis was performed using FlowJo (Treestar, USA).
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8

Whole Blood Particle Adhesion Assay

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Heparin (20 IU/ml) was added to the blood sample collected in citrate or EDTA coated tubes within 20 min of collection. Whole blood (500 µl) was plated in a 24-well plate and placed in the incubator at 37⁰C for 20 min. Polystyrene particles (500 nm) were sonicated for 5 min and then added to the cells at an approximate ratio of 1:200 (cells to particles) according to the combined theoretical neutrophil (5 million/ml) and PBMC (2 million/ml) counts in the blood. Whole blood and particle suspension was subjected to flow in the peristaltic pump at the desired flow rate for 2 hours. The cells were then collected and subjected to RBC lysis for 8 min. The cells were spun down and resuspended in flow cytometry buffer (PBS containing 1% BSA and 4mM EDTA), and were stained with antibodies against CD45 (clone 2D1, BD Biosciences, USA), CD14 (clone M5E2, BD Biosciences) and CD15 (clone HI98, BD Biosciences) for 20 min at 4⁰C. Finally, the cell suspension was stained with propidium iodide (2 µg/ml) and run on the flow cytometer. All flow cytometry data analysis was performed using FlowJo (Treestar, USA).
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9

Flow Cytometry Analysis of CD34+ Cells

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CD34 positive cell counts were determined preprocedurally in the autologous donor's peripheral blood and in the leukapheresis product by flow cytometry (FACS Calibur; Becton Dickinson, Heidelberg, Germany). In 48 cases, counting was also done in peripheral blood 1 h after the leukapheresis procedure. The flow cytometric analysis followed the accepted protocol provided by the International Society of Haematology and Graft Engineering. Total Leukocyte Count (TLC) was performed in a calibrated automated cell counter (Sysmex XE 2100; Sysmex Corporation, Japan) using monoclonal CD34 antibody (clone 8G12; BD Biosciences, San Jose,, CA, USA) and CD45 (clone 2D1; BD Biosciences).
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