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2 protocols using anti kca3.1 p4997

1

Cell Lysis and Western Blotting for Alzheimer's

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To obtain cell lysates, cells were washed with ice‐cold PBS and incubated and harvested with a lysis buffer (150 mmol/L NaCl, 10 mmol/L NaH2PO4, 1 mmol/L EDTA, 1% TritonX100, 0.5% SDS) with protease inhibitor cocktail and phosphatase inhibitor (Sigma). Mouse and human brain were homogenized in RIPA buffer (ThermoFisher) with protease inhibitor cocktail and phosphatase inhibitor (Sigma) and used for Western blotting as described.9 The following primary antibodies (dilutions) were used: anti‐KCa3.1 P4997 (1:1000, Sigma), anti‐phospho P38MAPK and anti‐P38MAPK (1:1000, Cell Signaling), anti‐β actin (1:3000, Sigma), and anti‐GAPDH (1:2000, Cell Signaling). Secondary antibodies were HRP‐conjugated anti‐rabbit or anti‐mouse antibody (1:1000, GE Healthcare). Brain tissue samples from 5xFAD treated with senicapoc or control diet were fractionated into TBS‐soluble and TBS‐insoluble, SDS‐soluble fractions, which were used for Aβ42 quantification by a Human Aβ42 ELISA kit (Wako) as described.16 Alternatively, Aβ in each fraction was separated in 16.5% Tris/Tricine SDS gel electrophoresis (Bio‐Rad), transferred to PVDF membrane, and detected by anti‐Aβ (6E10, 1:1000, BioLegend).
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2

Osteoclastogenesis Assay Protocol

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Cells were cultured in αMEM containing 2 mM L-glutamine (12561), 10% heat-inactivated FBS, 100 IU/ml Penicillin and 100 IU/ml Streptomycin (Life Technologies). qPCR primers were either designed or used as previously described and tested for their distinctive product sizes (Integrated DNA Technologies) (34 (link)). For a detailed list of primer constructs see supplemental table 1. CMG-1412 media was generated as previously described (35 (link)). IF antibodies and reagents: anti-KCa3.1 (P4997) (Sigma-Aldrich), anti-CD68 (FA-11) (Biolegend) (36 (link)), Phalloidin-FITC (Sigma-Aldrich), goat anti-rabbit AF-594 and goat anti-rat AF488 (life technologies), goat serum (Gemini-Bio products). Recombinant cytokines (mM-CSF, mTNF and mRANKL) were purchased from R&D Systems; inhibitors: TRAM-34, KN-93, cyclosporine A (CsA) (Sigma-Aldrich); Fluo-4-AM (life technologies); Western blot antibodies: anti-CREB (06-863) and anti-phospho-CREB (Ser133) (06-519) (Millipore) (14 (link)), anti-CaMKIV (H-5) (Santa Cruz Technologies) (37 (link)), anti-phospho-CaMKIV (Thr196, Thr200) (PA5-37504) (Thermo Fisher Scientific), anti-NFATc1 (7A6) (Thermo Fisher Scientific) (14 (link)), anti-β-actin (13E5) (Cell Signaling Technology)
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