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5 protocols using plvx tre3g zsgreen1

1

Lentiviral Transduction in 293T Cells

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Lentiviral production was performed in 293T cells. 293T cells were plated at ∼6 × 106 cells per 100 mm dish and incubated overnight. Cells were transfected with 6 μg of pLVX-TRE3G-ZsGreen1 or pLVX-EF1α-Tet3G vectors (for the inducible cell line, Clontech) with 4 μg of pCMV-Δ8.9 and 2 μg of VSVG helper plasmids using Fugene (Promega), according to the manufacturer’s instructions. After 15 h, 293T medium was replaced with ES medium. The supernatants containing viral particles were harvested after 48 h of transfection, filtered through 0.45 μm pore-size cellulose acetate filters and supplemented with polybrene (Millipore). Infections were performed with cells plated at a density of ∼1 × 106 cells for one well of 6-well plate with virus-containing supernatant supplemented with polybrene (Millipore).
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2

Construction of NT5C2 Mutant Plasmids

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We obtained the pET28aLIC (Plasmid #26094) and pL-CRISPR.efs.gfp (Plasmid #57818) plasmids from Addgene and pLVXTRE3GZsGreen1 vector from Clontech. We amplified the coding sequence of the NT5C2 cDNA from pLOC-NT5C2(7 (link)) and cloned it into the pET28aLIC and pLVXTRE3GZsGreen1 vectors using In-fusion cloning using the In-Fusion HD Cloning Kit (Clontech) following manufacturer guidelines. We generated lentiviral vectors expressing CAS9 and gRNAs targeting exon 3 or 8 of Nt5c2 by cloning the corresponding gRNA oligonucleotides (Sigma-Aldrich) into pL-CRISPR.efs.gfp as reported(42 (link)). We cloned NT5C2 R238W, K359Q, R367Q, L375F, D407A, K217R, K217Q, K344R, K344Q, S418A, S418D, S502A, S502D, D229A and D229S mutations into the pLOC-NT5C2(7 (link)) or pET28aLIC-NT5C2 by site directed mutagenesis using the QuikChange II XL Site-Directed Mutagenesis kit (Agilent Technologies) according to manufacturer’s guidelines.
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3

Cloning and Lentiviral Expression of FcγRIIB

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Total RNA from was isolated human B cells (isolated from patients with SLE as described below) using TRIzol RNA extraction reagent (Invitrogen; Thermo Fisher Scientific, Inc.). Subsequently, cDNA was synthesized using 1 µg of total RNA and the reverse transcription system [Tiangen Biochemical Technology (Beijing) Co., Ltd.]. The FcγRIIB gene was cloned by nest PCR using Taq PCR MasterMix [Tiangen Biochemical Technology (Beijing) Co., Ltd.] and outer primers (forward primer, 5′-ATC CGC CAA GCT TTG AGA GAA GGC TGT GAC T-3′ and reverse primer, 5′-AGG GAG CTT CAG GAC TCA GGT AGA TGA CT-3′) at 58°C annealing temperature for the first PCR and inter primers (forward primer, 5′-GCC CCC GGG ACG CGT ATG GGA ATC CTG TCA TTC TTA CC-3′ and reverse primer, 5′-CTA CCC GGT AGA ATT CCT AAA TAC GGT TCT GGT CAT CAG-3′) at 56°C annealing temperature for the second PCR. The FcγRIIB gene was inserted into the lentivirus-induced expression vector pLVX-TRE3G-ZsGreen1 (Takara Bio, Inc.) with green fluorescent protein (GFP) gene to construct the mFcγRIIB lentivirus.
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4

Lentiviral vector production protocol

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Surrogate HIV-based pseudovirion packaging plasmid HIV Gag-pol, transfer plasmids CSLucW2 (Firefly luciferase expression) or CSGW (hrGFP), and envelope plasmid for VSV-G protein and its backbone plasmid pcDNA3.1 have been described previously [43 (link)]. The pWPI-mCherry-BSD bicistronic expression vector was generated by introduction of the mCherry DNA sequence into a pWPI-BSD empty vector [44 (link)]. Both plasmids were digested with restriction enzymes BamHI and SpeI. The mCherry encoding fragment was gel isolated, purified and ligated into the new lentivirus expressing vector. mCherry expression was confirmed by pseudovirion generation and fluorescence-activated cell sorting (FACS) analysis. Lenti-XTM Tet-On® inducible expression system plasmids pLVX-Tet3G and pLVX-TRE3G-ZsGreen1 were purchased from Takara Bio. (Mountain View, CA, USA).
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5

Constitutive Expression of CYP3A Isoforms

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The doxycycline-inducible pLVX-TRE3G-ZsGreen1 (Takara Bio USA) vectors containing ZsGreen1-IRES-CYP3A4 and ZsGreen1-IRES-CYP3A5 are previously described.30 (link) All cloning primers are presented in Table S5. For this study, the ZsGreen1-IRES-CYP3A cassettes were subcloned into pcDNA3 (Thermo Fisher Scientific, Waltham, MA) to achieve constitutive gene expression, with ZsGreen1 serving as a transfection reporter. ZsGreen1-IRES-CYP3A4 was amplified with primers oAH522 and oAH523, and ZsGreen1-IRES-CYP3A5 was amplified with primers oAH522 and oAH524. The amplicons were cloned into HindIII-digested pcDNA3 with NEBuilder HiFi DNA Assembly Master Mix (New England Biolabs). Mutants were made with the QuikChange II Site-Directed Mutagenesis Kit (Agilent Technologies, Santa Clara, CA) with the primers listed in Table S5.
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