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6 protocols using ap156p

1

Protein Extraction and Western Blot Analysis

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Proteins were extracted from cell lines using mammalian protein extraction reagent (MPER; 50 nM Tris-HCl, 200 mM NaCl, 0.25% Triton 100X, and 10% glycerol) containing a protease and phosphatase inhibitor cocktail (Thermo Fisher Scientific, PIA32961). Protein concentration was determined by Bradford assay (Bio-Rad Laboratories, 500-0006). Twenty micrograms of total protein extract were separated in precast 4–15% gradient Tris-glycine SDS-polyacrylamide gels (Mini-PROTEAN® TGX™ Precast Gels, Bio-Rad, 456-1086) and transferred onto Trans-Blot Turbo Mini 0.2 µm nitrocellulose membranes (Bio-Rad, 170-4159). Membranes were blocked with 5% milk in PBS-Tween for 1 h and probed with primary antibodies overnight at 4 °C with agitation. Primary antibodies were detected with peroxidase-conjugated secondary antibodies Goat anti-mouse (Millipore, AP124P, 1:4000 dilution), Goat anti-rabbit (Millipore, AP156P, 1:10,000 dilution), and Rabbit anti-goat (Millipore, AP106P, 1/4000 dilution) and enhanced with chemiluminescence (Millipore, RPN2232) detected using the ChemiDoc MP Imaging System (Bio-Rad). Actin was used as a loading protein control. Each experiment was repeated three times. Image J was used to quantify western blot.
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2

Protein Extraction and Western Blotting

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Protein extraction and western blotting was performed using standard procedures. In brief, 30 μg protein per sample was separated by Bolt® Bis‐Tris 4–12% SDS/PAGE (Thermo Fisher) and blotted onto polyvinylidene fluoride (PVDF) by iBlot® (Invitrogen, Carlsbad, CA, USA) and blocked by 4% skim milk in 2% Tris‐buffered saline/Tween. Primary antibodies used in this study were as follows: 2A peptide 1 : 2000 ABS31 (Millipore, Billerica, MA, USA), SV40LT 1 : 400 Pab416 (Abcam, Cambridge, UK), and β‐actin 1 : 10 000 AC‐15 (Abcam). Secondary horseradish peroxidase (HRP) antibodies used in this study were as follows: goat anti‐rabbit (AP156P; Millipore) and rabbit anti‐mouse (ab97046; Abcam).
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3

Quantitative Immunoblotting of Placental Proteins

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Three-fold dilution series of purified recHPL and PPL (each 100 μl) were dot-blotted onto polyvinylidene fluoride (PVDF) membranes and blocked with 3% BSA in 10 mM Tris-HCl saline (pH 7.5), then cut into lanes and reacted with the rabbit anti-HPL IgGs for immunoblotting (Abcam, ab96100, 1:1,000) and the HRP labelled anti-rabbit IgG Fc (Millipore, AP156P, 1:5,000) at room temperature for 1 h each. The spots were visualized by ECL reagent (GE Healthcare ECLTM Western Blotting Detection Reagents). Chemiluminescence was detected using an ImageQuant LAS4000 mini imager (GE Healthcare). The plotted signal intensities were calculated using ImageJ (NIH) software.
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4

Western Blot Analysis of Cytoskeletal Proteins

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Proteins were extracted in 1× RIPA Buffer (Sigma‐Aldrich) with 1× Protease Inhibitor Cocktail (PIC) and 1× phenylmethylsulfonyl fluoride (PMSF) and thereafter quantified with Bradford protein reagent (Bio‐Rad Laboratories GmbH, Munich, Germany) and resolved (10 µg) in Acrylamide/Bis‐acrylamide gels followed by transference to polyvinylidene difluoride (PVDF) Amersham HybondTM‐P membranes (GE Healthcare) plus 2 h blocking in 1× PBS/5% non‐fat‐dried milk/0.2% Tween‐20 at room temperature. Overnight incubation with antibodies (Cell Signaling Technology) against β‐actin (Cat# 4970, RRID:AB_2223172; 1:1000), CDC42 (Cat# 2466, RRID:AB_2078082; 1:500) and RHOA (Cat# 2117, RRID:AB_10693922; 1:500) in 1× PBS/0.5% non‐fat‐dried milk/Tween‐20 0.2% was performed at 4°C and further incubation with the secondary antibody‐HRP against rabbit (Millipore Cat# AP156P, RRID:AB_11213985; 1:1000) was done for 2 h at room temperature. Immobilon® Crescendo Western HRP Substrate (Merck Millipore) was used, revealed in an Amersham Imager 600 (GE Healthcare). Data were curated using Quantity One 1‐D software (RRID:SCR_014280; Bio‐Rad).
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5

Immunoprecipitation and Western Blotting

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For IP, harvested cells were lysed in DISC lysis buffer as described earlier. 30 µl anti-FLAG M2 affinity gel (Sigma-Aldrich, #A2220) or protein G agarose (Millipore Sigma, #11719416001) was collected and washed with 20 ml DISC wash buffer (DISC lysis buffer without any addition of supplements). protein G agarose was coupled with either 2 µg caspase-8 p18 antibody (Santa Cruz, sc-6136), 2 µg GFP antibody (Roche, 11814460001), custom-made human Usp27x (2-4 µg, see below), mouse mAb IgG1 isotype control antibody (Cell Signaling, #5415) or rabbit mAb IgG isotype control antibody (Cell Signaling #3900). Lysates were added as indicated and were incubated for 4 h at 4 °C on a roller. Columns were washed 2x with 20 ml DISC wash buffer and elution was performed with 3x Laemmli (5 min. 95 °C). Eluted samples were loaded alongside input (whole cell lysates) on SDS-gels as described earlier.
Heavy chain specific goat anti-rabbit (Millipore, AP156P) and goat anti-mouse (Millipore, AP127P) or light chain specific rabbit anti-mouse (Cell Signaling, 58802) and mouse anti-rabbit (Jackson I.R. Lab., 211-032-171) peroxidase coupled secondary antibodies were used for detection to avoid cross reaction with the IP-antibody.
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6

Immunoblotting for Cellular Proteins

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ß-Actin (AC14) (abcam, Cambridge, UK; AB6276, 1:20,000 dilution), PARP1 (Proteintech, Rosemont, IL, USA; 66250, 1:650 dilution), PAR/pADR (R&D systems, Minneapolis, MN, USA; 4335-MC-100, 1:1000 dilution), goat anti-mouse (Millipore, Burlington, MA, USA; AP124P, 1:4000 dilution), goat anti-rabbit (Millipore, Burlington, MA, USA; AP156P, 1:10,000 dilution) and rabbit anti-goat (Millipore, AP106P, 1/4000 dilution).
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