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4 6 diamino 2 phenylindole dapi

Manufactured by Merck Group
Sourced in United States, Germany, Israel

4',6-diamino-2-phenylindole (DAPI) is a fluorescent dye used in various laboratory applications. Its core function is to selectively bind to double-stranded DNA, allowing visualization and detection of nucleic acids.

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116 protocols using 4 6 diamino 2 phenylindole dapi

1

Lymphatic-Targeted PLGA Nanoparticles for Cancer

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PLGA (lactide: glycolide = 50:50, MW = 12,000 Da) was purchased from Jinan Daigang Biological Material Limited Company (Shandong, China). PFH was purchased from J&K Scientific Ltd. (Beijing, China). DOX was obtained from Beijing Yihe Biological Co. Ltd. (Beijing, China). GSN monoclonal antibodies, poly(vinyl alcohol) (PVA, 99% MW`=30,000–70,000), 2-(N-morpholino)ethanesulfonic acid (MES), 1-ethyl-3-(3-(dimethylamino)propyl)carbodiimide hydrochloride (EDC), N-hydroxysuccinimide (NHS), 1,1-dioctadecyl-3,3,3,3-tetrame-thylindocarbocyanine perchlorate (DiI), 4,6-diamino-2-phenylindole (DAPI), and coumarin-6 were purchased from Sigma–Aldrich (St. Louis, MO, USA). The use of a mouse ascitic hepatocarcinoma cell line with high lymphatic metastasis (Hca-F) was approved by the ethics committee of the Affiliated Lianyungang Hospital of Xuzhou Medical University (LW-20180611012). All chemicals used in this work were analytical grade and used without further processing.
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2

Immunofluorescence Staining of Cells

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BC cells were added in culture dishes and fixed with 4% paraformaldehyde for 20 min. BC cells were treated with 0.2% Triton X-100 for 3 min, and incubated with 5% BSA for 1 h. The primary antibody was added into the dish overnight at 4 °C. Slides were then washed three times with PBS and incubated 1 h with secondary antibody. The cells were stained by 4, 6-diamino-2-phenylindole (DAPI, Sigma-Aldrich, St Louis, MO, USA) in PBS for nuclear staining. Images were taken in a Carl Zeiss fluorescent microscope (Carl Zeiss Microscopy).
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3

Transwell Assay for Cell Migration

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Cell migration was analyzed by transwell method (17 (link), 18 (link)). Briefly, following cellular transfection with gal-3 siRNA or scramble siRNA, VSMCs were resuspended in DMEM and loaded into the upper chambers (Corning Inc., Corning, NY, USA). The lower chambers were filled with DMEM in the presence or absence of 2 U/ml thrombin. After 24-h incubation for 37°C, the lower side of the filter was washed and fixed prior to being stained with 4′,6-diamino-2-phenylindole (DAPI; 1:1,000; Sigma-Aldrich) for 5 min. The cells were counted using a microscope in three random high-power fields (magnification, ×100) for each well.
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4

Adiponectin Peptide: Antioxidant Potential

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Adiponectin peptide was entrusted and synthesized by Sangon Biotech Co., Ltd (Shanghai, China). Glutamate, dichlorofluorescin diacetate (DCF-DA), and 4′,6-diamino-2-phenylindole (DAPI) were purchased from Sigma-Aldrich (St. Louis, MO, USA). 3-(4,5-Dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide (MTT) and dimethyl sulfoxide (DMSO) were purchased from Beyotime (Shanghai, China). The assay kits of LDH, MDA, SOD, and GSH-Px were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). Terminal deoxynucleotidyl transferase dUTP nick-end labeling (TUNEL) kits were purchased from Roche (Mannheim, Germany). Antibodies against SIRT1, cleaved caspase-3, Bax, Bcl-2, and β-actin were purchased from Cell Signaling Technology (Beverly, MA, USA). Antibody against PGC-1α was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The appropriate secondary antibodies were purchased from Beyotime (Shanghai, China). SIRT1 siRNA and control siRNA were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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5

Immunofluorescence Analysis of A549 Cells

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A549 investigated cells were fixed in 3.8% paraformaldehyde solution containing 0.2% Triton X-100 (Sigma-Aldrich, USA) for 5 min at 37°C and subjected to immunostaining. To evaluate the effect of angiotensin-(1–7) and miRNA transfections in A549 cellular morphology, the actin filaments were stained in a 1% bovine serum albumin (BSA) solution containing 100 μg/ ml of phalloidin-tetramethylrhodamine B isothiocyanate (TRITC) (Sigma-Aldrich, USA) for 1 h. Next, the nuclei of the cells were counterstained in 3.33 ng/ ml 4’,6 diamino-2-phenylindole (DAPI, Sigma-Aldrich, USA) solution for 5 min. After extensive washes with saline phosphate buffer (PBS, 2.7 mM KCl, 1.5 mM KH2PO4, 137 mM NaCl, and 8 mM Na2HPO4, pH 7.4), the coverslips containing cells were subsequently mounted onto slides and subjected to microscopic immunofluorescence analysis. Images were obtained with an Olympus BX51 microscopy equipped with corresponding filter sets and a DP71 CCD camera (Tokyo, Japan). One hundred randomly selected cells were analyzed in each investigated group. For phase-contrast analyses required in the in vitro scratching assays (wound healing) and in the cellular invasion chamber assays, the same microscopy was used and images were monitored and quantified using the Image J software (http://rsb.info.nih.gov/ij/).
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6

Immunofluorescence analysis of skin and cells

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The paraffin sections of human or mouse skin were flushed with PBS, then sealed with 5% donkey serum containing 0.3% Triton-100 at room temperature for 2 h. After blocking, anti-CD68 (1 mg/mL diluted by 1:100), anti-TLR2 (0.6 mg/mL diluted by 1:100), anti-KLK5 (1.295 mg/mL diluted by 1:100) and anti-IL-6 (0.555mg/ml diluted by 1:100) antibodies (all from Abcam) were incubated overnight at 4°C in a dark wet box. The sections were then incubated with Alexa Fluor 488 or 555 antibodies as the secondary antibody at room temperature for 2 h. Finally, 4′, 6-diamino-2-phenylindole (DAPI, Sigma) was counterstained for 15 min.
RAW 264.7 cells were fixed with 4% paraformaldehyde for 30 min, permeabilized with PBS containing 0.3% Triton-100 for 20 min, and then sealed with 10% donkey serum for 30 min with PBS washes between each step. Next, the cells were incubated with anti-TLR2 (0.6 mg/mL diluted by 1:100), anti-KLK5 (1.295 mg/mL diluted by 1:100), and Alexa Fluor 488 (1:300) or 555 (1:300; Thermo Fisher Scientific) antibodies as primary and red- and green-fluorescently labeled secondary antibodies, respectively. Finally, DAPI was counterstained for 15 min. Images were captured using a Zeiss Axio Scope A1 (Zeiss, Oberkochen, Germany).
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7

Vascular Response to Implanted Stent Wires

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The study was conducted in accordance with relevant national legislation on the use of animals for research and the protocol was approved by the Ethics Committee of Sichuan province and Southwest Jiaotong University (Project identification code: SYXK(Chuan)2014-189). This experiment was carried out by implanting the bare 316L SS wires (Φ 0.1 mm × 10 mm) and PTMC-E5 coated 316L SS wires in the lumen of SD rats’ abdominal aorta for 1 month [31 (link)]. In brief, the wire remained in contact with flowing blood within the aorta to simulate the presence of a stent strut, with some regions of the wire in direct contact with the arterial wall and some not in contact. After 1 month, the aortas containing the implanted wires were harvested for histological analysis. Rat aortas containing the 316L SS wire implants were snap-frozen in liquid nitrogen and cryo-sectioned for histological analysis. Cross sections were ethanol-fixed and then stained with antibodies specific for EC (CD31, Sigma, Ontario, CA, USA), Smooth muscle cells (SMC, α-SMA, Sigma, Ontario, CA, USA) and macrophages (TNF-α, Sigma, Ontario, CA, USA). The nuclei of all the cells were stained by 4,6-diamino-2-phenyl indole (DAPI, Sigma, Ontario, CA, USA). The stained images were observed by confocal laser-scanning microscopy (CLSM, Nikon Eclipse Ti, Nikon, Tokyo, Japan).
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8

Immunohistochemical Characterization of Enteric Nervous System

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ENS single cells were fixated with 4% formaldehyde in PBS at 5°C for 17 min on glas coverslips. Adult ENS networks were centrifuged, washed with PBS and separated from PBS residues. They were embedded in Tissue-Tek by freezing at −80°C. Tissue-Tek slices (10 μM) were made with a Kryostat and fixated with ice cold Acetone 70% (Applichem, 70% + 30% water). As primary antibodies rabbit anti iNOS (polyclonal, ab15323, Abcam), rabbit anti GFAP (polyclonal, Z0334, Dako, Germany) and mouse anti Tubulin β III (monoclonal, MAB1637, Merck Millipore, Germany) were used. Alexa Fluor 594 goat anti rabbit (Invitrogen, USA) and goat anti mouse 488 (Invitrogen, USA) were used as secondary antibodies. Rabbit IgG (Dako, Germany) was used for the isotype control. 4′,6-diamino-2-phenylindole (DAPI, Sigma-Aldrich, Germany) was used for nuclear stainings.
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9

Immunostaining of Cardiac Cell Markers

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Fresh heart tissue was embedded and sliced using optimal cutting temperature (OCT). Tissue sections and cultured cells were fixed in 4% paraformaldehyde for 30 min and then permeabilized with 1% Triton X-100 in PBS for 10 min. The samples were incubated with goat serum at room temperature for 1 h. Afterward, the samples were incubated overnight at 4°C with the following primary antibodies, which were diluted with goat serum: anti-cardiac troponin T (cTnT; ab8295; Abcam, Cambridge, UK), anti-pH3 (53348; CST, Danvers, MA, USA), anti-Ki67 (ab15580; Abcam), anti-α-SMA (ab124964; Abcam), and anti-CD31 (ab222783; Abcam). The next day, the samples were stained with fluorescent secondary antibodies (Alexa Fluor 488 and/or 594; Proteintech, Rosemont, IL, USA) at room temperature for 1 h. The nuclei were stained with 4, 6-diamino-2-phenylindole (DAPI; Sigma-Aldrich, St. Louis, MO) for 10 min. Images were collected using a fluorescence microscope (Olympus, Tokyo, Japan).
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10

Fluorescence Microscopy of Transfected Cells

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After transfection (48 h), Dulbecco’s PBS (DPBS) was used to wash H4 cells. Then, the cells were fixed with 4% paraformaldehyde (PFA) for 10 min at room temperature (RT), and washed 3 times with DPBS. For fluorescence microscopy, H4 cells were stained with Hoechst 33258 (Life Technologies, Invitrogen) (1:5,000 in DPBS) for 5 min. A Leica DMI 6000B microscope was used for fluorescence images acquisition (9 (link)).
For yeast cell analysis, an aliquot of yeast culture (1 mL of suspension 1 mg/mL) was centrifuged and resuspended in 200 µL of distilled water. A total of 1 µL of this suspension, added with 1 µL of n-propyl gallate and 1 µL of 4′-6-diamino-2-phenylindole (DAPI) (1:10,000 vol/vol) (Sigma-Aldrich), was added in a slide and maintained in dark for fluorescence microscopy. Fluorescence images were acquired with an Olympus IX73 microscope. For each result, at least 50 transfected cells per strain and condition were detected, scored based on hSod1 inclusions pattern, and classified into 3 groups: cells without inclusions, 5 or less inclusions (≤5 inclusions), and more than 5 inclusions (>5 inclusions) (9 (link), 44 (link)).
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