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3 protocols using anti mhcii apc

1

Isolating Immune Cells for Analysis

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Mononuclear cells were isolated as described (Lutz et al., 2017 (link)). Spinal cords from WT and het-cKO female mice 21 days postimmunization were homogenized between frosted glass slides. Mononuclear cells were isolated at the interphase of a 30%–70% Percoll gradient (GE Healthcare). Spleens were mechanically homogenized, and red blood cells lysed. Single-cell suspensions were restimulated for 6 hr in vitro with phorbol 12-myristate 13-acetate, ionomycin, brefeldin, and monensin (eBioscience). After Fc receptor blockade, cells were stained with e780 viability dye (eBioscience) and CD45-BV421 (BD Pharmingen). Cells were fixed, permeabilized, and stained for IL-17α-PE (phycoerythrin) and IFN-γ-allophycocyanin (APC) (BD Pharmingen). Unstained cells were used for single-channel compensation, isotype controls, and fluorescence-minus-one controls. Compensation and analysis was done with Kaluza software (Beckman Coulter).
For MHC Class II, astrocytes were stimulated with IFNγ for indicated times and doses, then detached using Acutase (Fisher Scientific) for 3 min at 37°C. Cells were centrifuged, resuspended in fluorescence activated cell sorting (FACS) buffer (PBS, 2 mM EDTA and 2 mg/ml BSA), then stained with anti-MHCII-APC (Miltenyi Biotec 130–112-388) for 30 min on ice. Cells were washed twice with FACS buffer then analyzed on a LSR Fortessa (BD Bioscience).
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2

Liver Immune Cell Subset Profiling

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Characterization of immune cell subsets in the liver was performed essentially as described previously21 (link). The individual samples were analyzed with a LSRII/Fortessa flow cytometer (BD Biosciences) and the FlowJo software Vx (Treestar). All indicated antibodies and reagents were titrated to determine optimal concentrations. CompBeads (BD) were used for single-color compensation to create multi-color compensation matrices. For gating, fluorescence minus one controls were used. The instrument calibration was controlled daily using cytometer setup and tracking beads (BD). Single cell suspensions were created using the Miltenyi Liver Dissociation Kit (No. 130-105-807) and the GentleMACS isolator (Miltenyi) using standard protocols. The following antibodies were used: anti-CD3-PE-CF594, anti-CD4-V500, anti-CD11c-AlexaFluor700, anti-CD19-APC-H7, anti-CD326 (EPCAM)-BV711, anti-Ly6C-PerCP-Cy5.5 (all from BD), anti-CD8-eFluor650, anti-CD11b-eFluor605NC (eBioscience), anti-CD45-VioBlue, anti-CD49b-PE, anti-MHC-II-APC (Miltenyi), anti-F4/80-PE-Cy7, anti-Ly6G-APC-Cy7 (Biolegend). A gating strategy is provided in the supplementary material and methods (Fig. S1).
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3

Characterization of Tumor-Immune Landscape

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In order to characterize the phenotype of splenocytes (SPC) and tumor-infiltrating immune cells, single-cell suspensions were derived from the spleens and from lungs of wt tumor-bearing and K-rasG12D-vaccinated mice, as described in [73 (link)]. Cells were treated with Fc receptor blocker (BD Biosciences) and then stained for 30 min at 4 °C with the following antibodies: anti-CD45-VioGreen, anti-CD3-FITC, anti-CD4-APC/Vio770, anti-CD8-VioBlue, anti-CD49b-PE, anti-TCRγδ-PE/Vio770, anti-PD1-APC, anti-CD11b-FITC, anti-F4/80-PE/Vio770, anti-Ly6C-APC/Vio770, anti-Ly6G-VioBlue, anti-MHCII-APC (Miltenyi Biotec Bergisch Gladbach, Germany), anti-CD206-PE, and anti-CD69-PE/Vio770 (Biolegend, San Diego, CA, USA). Labeled samples were acquired on a BD FACSVerse and analyzed using FlowJO10.5.3 software.
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