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Anti cleaved caspase 6

Manufactured by Cell Signaling Technology
Sourced in United States

Anti-cleaved caspase-6 is a laboratory reagent that detects the activated form of caspase-6, a protease enzyme involved in the apoptosis (programmed cell death) signaling pathway. This product can be used in various biochemical and cell biology applications to study caspase-6 activation.

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8 protocols using anti cleaved caspase 6

1

Western Blot Analysis of Apoptosis Markers

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All chemicals were sourced from Sigma-Aldrich (St. Louis, MO, USA), unless otherwise stated. For the western blot analysis, the following primary and secondary antibodies were used: Anti-cleaved caspase-6 (#9761), anti-cleaved caspase-7 (#9491), anti-cleaved caspase-8 (#9496), anti-cleaved caspase-9 (#9505), anti-PARP (#9542), anti-ATF6 (#65880), anti-BiP (#3177), anti-CHOP (#2895), anti-EGFR (#4267), and anti-MEK (#8727) from Cell Signaling Technology (Danvers, MA, USA). Anti-H-FABP (ab45966) and anti-CD36 (ab133625) from Abcam (Cambridge, UK), and anti-actin (clone AC-40).
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2

Investigating Amino Acid Metabolism Regulation

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Cells were collected and lysed with lysis buffer supplemented with a protease and phosphatase inhibitor cocktail (Thermo Fisher, MA, USA). Then, the proteins were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and immunoblotted. The antibodies used are as follows: anti-SLC1A5 (SAB2108565, Sigma, MO, USA), anti-SLC7A5 (PA5-50485, Thermo Fisher, MA, USA), anti-glutamine (ab93434, Abcam, UK), anti-glutamate dehydrogenase (PA5-28301, Thermo Fisher, MA, USA), anti-caspase 3, anti-cleaved caspase 3, anti-caspase 6, anti-cleaved caspase 6, anti-caspase 7, anti-cleaved caspase 7, and anti-β-actin (Cell Signaling Technology, MA, USA). Secondary antibodies conjugated to horseradish peroxidase were subsequently incubated with the membranes, followed by enhanced chemiluminescence development (Thermo Fisher, MA, USA). Three independent experiments were performed for each analysis. Co-immunoprecipitation was performed using the Pierce Classic Magnetic IP/Co-IP Kit (Thermo Fisher, MA, USA). Anti-AhR (Abcam, Ab2769) and IgG isotype control (Cell Signaling Technology, 3900) antibodies were used.
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3

Apoptosis Signaling Pathway Quantification

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The anti-GAPDH (Cat# 5174), anti-caspase-1 (Cat# 2225), anti-cleaved-caspase-3 (Cat# 9664), anti-cleaved-caspase-9 (Cat# 9505), anti-cleaved-caspase-6 (Cat# 9761), anti-cleaved-caspase-7 (Cat# 8438), anti-cleaved-caspase-8 (Cat# 4790), anti-Bax (Cat# 2774), anti-Cytochrome c (Cat# 4272), anti-PARP (Cat# 9542), anti-tom20 (Cat# 42406), antibodies were purchased from Cell Signaling Technology. Anti-GSDME (Cat# ab215191), and anti-GSDMD (Cat# ab209845) antibodies were purchased from abcam. The anti-rabbit (Cat# 7076) and anti-mouse (Cat# 7074) secondary antibodies were purchased from Cell Signaling Technology. Hoechst 33342 (Cat# 1399), ROS detection CM-H2DCFDA (Cat# C6827), were purchased from ThermoFisher Scientific. The Apoptosis Detection FITC Annexin V was purchased from BD Biosciences. The Caspase-3-specific inhibitor Z-DEVD-FMK (Cat# HY12466), staurosporine (Cat#HY-15141) and GSH (Cat#HY-D0187) were purchased from Master of Small Molecules. Caspase-pan inhibitor Q-VD was purchased from Sigma Aldrich. The CytoTox 96 Non-Radioactive Cytotoxicity Assay (Cat#G1780) was purchased from Promega. The Cell Counting Kit-8 and 4-(4-(Dihexadecylamino)styryl)-N-methylpyridinium iodide were purchased from Dojindo.
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4

Testis Protein Extraction and Western Blot

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The whole mouse testis was homogenized in cold RIPA buffer (Cell Signaling Technology, #9806) containing 1 mM benzylsulfonyl fluoride (PMSF) (WAKO, #164-12181) and protease inhibitor cocktail (Complete EDTA-free, Roche, #11873580001). Lysates were centrifuged at 15,000 rpm for 15 min at 4 °C and supernatants were used for western blot analysis. Western blot analyses were performed with anti-phosphorylated AMPK (Cell Signaling technology, 1:1000; #2535), anti-αAMPK (Cell Signaling technology, 1:1000; #2532), anti-AdipoR1 (Immuno-Biological Laboratories, 1:1000; #18993), anti-cleaved caspase-3 (Cell Signaling technology, 1:1000; #9661), anti-cleaved caspase-6 (Cell Signaling technology, 1:1000; #9761), anti-cleaved caspase-9 (Cell Signaling technology, 1:1000; #9509), anti-α-tubulin (Cell Signaling technology, 1:4000; #2125) and HRP-linked anti-rabbit IgG (Cell Signaling technology, 1:2000–1:20000; #7074) antibodies. Uncropped western blot images are shown in Fig. S2-S5.
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5

DDT and Apoptosis Pathway Analysis

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We purchased p,p’-DDT (1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane; product number 31041-100MG) from Sigma-Aldrich (www.sigmaaldrich.com), and propidium iodide from Abcam (www.abcam.cz: ab14085). For the western blot analysis, we used the following primary and secondary antibodies: anti-cleaved caspase-6 (#9761), anti-cleaved caspase-7 (#9491), anti-cleaved caspase-8 (#9496), anti-cleaved caspase-9 (#9505) anti-cleaved and total PARP (#9542), anti-GRP78 (#3177), and anti-CHOP (#2895) from Cell Signaling Technology (www.cellsignal.com). We purchased anti-actin (clone AC-40) primary antibody from Sigma-Aldrich (www.sigmaaldrich.com: A4700), and corresponding horseradish peroxidase-conjugated secondary antibodies from Proteintech (www.ptglab.com: SA00001-2, and SA00001-1).
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6

Apoptosis Pathway Protein Analysis

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TAS4464 was designed and synthetized at Taiho Pharmaceutical Co., Ltd. and cytarabine (cytosine beta-D-arabinofuranoside hydrochloride) and the anti-Actin antibody (#A2066) were purchased from Sigma-Aldrich Co., LLC. Anti-cleaved caspase-3 (#9664), anti-cleaved caspase-6 (#9761), anti-cleaved caspase-7 (#8438), anti-cleaved caspase-8 (#9496), anti-cleaved caspase-9 (#9501, #20750), anti-cleaved PARP (#9541), anti-Bak (#3814), anti-Bax (#2772), anti-Mcl-1 (#4572), anti-Puma (#4976), anti-Bim (#2819), anti-Bcl-2 (#2872), anti-Bcl-xl (#2762), anti-Bcl2l10 (#3869), anti-XIAP (#2042), and anti-c-Myc (#5605) antibodies were purchased from Cell Signaling Technology, Inc. Anti-c-FLIP (sc-5276), anti-FAS (sc-715), anti-FAS-L (sc-957) and anti-c-Myc (sc-40) antibodies were purchased from Santa Cruz Biotechnology, Inc. Anti-NEDD8 (ab81264), anti-NOXA (ab13654), anti-c-Myc (ab32072), and anti-α-Tubulin (ab4047) antibodies were purchased from Abcam plc.
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7

Western Blot Analysis of Apoptosis Markers

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Total mouse brain proteins were extracted using Western-IP Lysis Buffer (Beyotime,Wuhan, China) and quantified using the BCA protein assay kit (Beyotime, Wuhan, China). In total, 10 μg of total proteins were electrophoresed on 12% SDS polyacrylamide gels and transferred onto nitrocellulose membranes. The membranes were blocked with PBS/Tween 20® (PBST) containing 5% non-fat milk for 90 min at room temperature and then incubated overnight at 4 °C with the following primary antibodies: anti-caspase-3, anti-cleaved caspase-3, anti-caspase-6, anti-cleaved caspase-6, anti-RIP3, anti-Beclin-1 (Cell Signaling Technology, Danvers, USA), anti-caspase-4, anti-phosphor-RIP3 (Abcam, Cambridge, UK), anti-LC3B (Beyotime,Wuhan, China), and anti-β-actin (Cell Signaling Technology, Danvers, USA) as the control. After incubation with HRP-conjugated goat anti-rabbit IgG or HRP-conjugated goat anti-rat IgG (Cell Signaling Technology), the nitrocellulose membranes were washed three times, and bands were visualized by chemiluminescence with Pierce Enhanced Chemiluminescence Detection Reagent (Millipore, Burlington, USA) on the ChemiDoc™ Touch imaging system (Bio-Rad, Hercules, USA). Relative band intensity was analysed by AlphaViewTM software (Alpha Innotech Corporation, San Jose, USA).
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8

Evaluating Apoptosis Signaling Pathways

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We purchased p,p'-DDT (1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane; product number 31041-100MG) from Sigma-Aldrich (www.sigmaaldrich.com), and propidium iodide from Abcam (www.abcam.cz; ab14085). For the western blot analysis, we used the following primary and secondary antibodies: anti-cleaved caspase-6 (#9761), anti-cleaved caspase-7 (#9491), anti-cleaved caspase-8 (#9496), anti-cleaved caspase-9 (#9505) anti-cleaved and total PARP (#9542), anti-GRP78 (#3177), and anti-CHOP (#2895) from Cell Signaling Technology (www.cellsignal.com). We purchased anti-actin (clone AC-40) primary antibody from from Sigma-Aldrich.
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