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5 protocols using poly adp ribose polymerase parp

1

Western Blot and Immunoprecipitation Procedure

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Equal amounts of proteins were separated by SDS-PAGE, and then transferred onto polyvinylidene membranes (Millipore, SaintQuentin enYvelines, Belgium) by electrotransfer. Membranes were blocked with 5% skim milk in PBS-T (containing 0.1% Tween-20), and proteins of interest were visualized using specific Anti-Stathmin (Cell SignalingTechnology, Beverly, MA, USA), poly (ADP-ribose) polymerase (PARP) (BD Biosciences, San Jose, CA, U.S.A.), integrin β1, and integrin α5(BD Biosciences, San Jose, CA), caspase-3 (Santa CruzBiotech, CA, USA). Anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody and secondary antibodies, conjugated with horseradish peroxidase (HRP), were ordered from KangChen Biotech (Shanghai, China).
For immunoprecipitation, the cells were lysed inbuffer containing 50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 1% Nonidet™ P-40 (NP-40), 5 mM EDTA, 5 mM ethylene glycol tetraacetic acid, 15 mM MgCl2, 60 mM β-glycerolphosphate, 0.1 mM sodiumorthovanadate, 0.1 mM NaF, 0.1 mM benzamide, 10 μg/ml aprotinin, 10 μg/ml leupeptin, 1 mM PMSF. Twenty microliters of protein A/Gagarose beads (BD Bioscience Pharmingen) were added to the lysates for proper periods of incubation. The beads were then washed and subjected to SDS-PAGE and immunoblotting.
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2

Protein Expression Analysis in Cells

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Cells were grown to ∼70% confluence and reagents were added as indicated. Western blot analysis was performed as described previously (36 (link),37 (link)) with the following antibodies: phospho-SRC (Y416), phospho-STAT3 (T705), and SRC (Cell Signaling Technology, Inc., Boston, MA, USA), ALDH1A1 (Abcam, Cambridge, UK), Poly-ADP-ribose-polymerase (PARP; BD Biosciences, Franklin, NJ, USA), α-tubulin and β-actin (Sigma, St. Louis, MO, USA).
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3

Signaling Pathways in B-cell Malignancies

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Ibrutinib was purchased from Selleckchem (Houston, TX, USA), cerdulatinib was provided by Portola Pharmaceuticals Inc. (South San Francisco, CA, USA), CpG (ODN2006, stimulatory CpG-ODN type B, human specific) was purchased from Invivogen (San Diego, CA, USA), IL-6 was from R&D Systems (Minneapolis, MN), and IL-4 and CD40L were from Enzo Life Sciences (Plymouth Meeting, PA, USA). Antibodies: anti-phosphorylated BTK (p-BTK) (Y223), p-IκBα (S32/36) p-STAT3 (Y705), STAT3, MCL-1, p-JAK1 (Y1022), p-JAK3 (Y980), p-STAT6 (Y641), p-STAT3 (S727), and p-JAK2 (T1007/1008) were purchased from Cell Signaling Technology (Danvers, MA, USA); anti-total BTK antibody, poly ADP-ribose polymerase (PARP), and the BrdU detection kit were from BD Biosciences (San Jose, CA, USA); anti-p65, STAT-6, STAT-3, JAK1, JAK2, JAK3 and GAPDH antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). For flow cytometry, FITC-anti-CD19 (clone HIB19) and PE-anti-CD5 (clone UCHT2) were purchased from eBioscience (San Diego, CA, USA). Alexa Fluor® 647-anti-p-AKT (Ser473) and Alexa Fluor® 488 anti-p-p44/42 MAPK (ERK1/2) (T202/Y204) were purchased from Cell Signaling Technology, and PE-anti-p-PLCγ2 (Y759) was purchased from BD Bioscience.
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4

Anticancer Effects of Ipomoea Balsamina

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Methanol extract from I. balsamina was kindly provided by Prof. Ki-Han Kwon in Gwangju University (Gwangju, Korea). 4’-6-diamidino-2-phenylindole (DAPI) fluorescent nuclear dye, AICAR and metformin were supplied by Sigma-Aldrich (Louis, MO, USA). Antibodies against p-AMPK (T172), AMPK, phosphorylation of mammalian target of rapamycin (p-mTOR) (S2448), mTOR, p-p70S6 kinase (T389), p70S6 kinase, p-p38 (T180/Y182), p38, p-ERK (T202/Y204, T185/Y187), extracellular-signal-regulated kinases (ERK), cleaved caspase-9, cleaved caspase-3, Bid, Bak, Bad, Bax, Puma, Bim, Bcl-xL, Mcl-1 and Bcl-2 were obtained from Cell Signaling Technology, Inc., (Charlottesville, VA, USA). Poly (ADP-ribose) polymerase (PARP) and cytochrome C antibodies were purchased from BD Pharmingen (San Jose, CA, USA). Actin and α-tubulin antibodies were purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA). Cox 4 antibody was acquired from Abcam (Cambridge, UK).
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5

Molecular Signaling Pathway Analysis

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Western blot analysis was performed using antibodies against Mcl-1, JNK (56G8), pJNK (81E11), pMEK (41G9), MEK (D1A4), pERK1/2 (197G2), ERK1/2 (137F5), pAKT (S473) (193H12), pAKT (T308) (244F9), AKT, pS6 (Ser235/236), S6, p4EBP-1 (Thr70), 4EBP-1, pPI3K p85 (Tyr458)/p55(Tyr199) (Cell Signaling Technology, Danvers, MA, USA), PI3K p110 delta (Novus Biologicals), caspase-3, p21, IER3 (Santa Cruz Biotechnologies, San Diego, CA, USA), and poly(ADP-ribose) polymerase (PARP) (BD).
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